Neophocaena asiaeorientalis asiaeorientalis (Yangtze finless porpoise): 112405527
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Entry
112405527 CDS
T08872
Symbol
LMO7
Name
(RefSeq) LIM domain only protein 7 isoform X1
KO
K06084
F-box protein 20
Organism
nasi
Neophocaena asiaeorientalis asiaeorientalis (Yangtze finless porpoise)
Pathway
nasi04520
Adherens junction
Brite
KEGG Orthology (KO) [BR:
nasi00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04520 Adherens junction
112405527 (LMO7)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
nasi04121
]
112405527 (LMO7)
Ubiquitin system [BR:
nasi04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
112405527 (LMO7)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DUF4757
CH
LIM
PDZ
PDZ_6
PDZ_2
Motif
Other DBs
NCBI-GeneID:
112405527
NCBI-ProteinID:
XP_024609720
UniProt:
A0A341C4E8
LinkDB
All DBs
Position
Unknown
AA seq
1583 aa
AA seq
DB search
MEEAEADCALAFAEAQRWVEAVTEKNFETKDFRASLENGVLLCDLINKLKPGVIKKINRL
STPIAGLDNINVFLKACEQIGLKEAQLFHPGDLQDLSNRVTVKQEETDRRVKNVLITLYW
LGRKAQSNPYYNGPYLNLKAFENLLGQALTKALEESSFLKRSGRDSGYGDIWCAERGEFL
APPGNYKREDSFESLDSLGSRSFTSCSSDITLRGAREGCESDTDSEFTFKMQDHNKDDMS
YRRISAVEPKSALPFNRFLPNKGRQPSYVPAPLRKKKLDKNEDNRRTWASPVCIEADGTF
PSNERRTWGTNVENWPTVQETSDSSCYLEEAEEKTSIPNTVRDDLYVRKLSPIMPSPGNA
FDQFLPKCWIPEDVNWKRIKRETYKPWYKEFQGFSQFLLLQALQTYSDDILSSETHIKID
PTAGPRLITRRKNLSYTPDDLEMPALDPDLENDDFFVRKTGAFHANPCVLRAFEDLRRLS
GQDDPVEQDIILQCREGELVLPDLEKDDMIVRRIPAQKKEVPLSGAPDRYQPVPFPEPWT
LPPEIQAKFLCVLERTCPPKEKSNSCRVLVPSWRQKKDDMLARKIQSWKLGTTVPPVRFT
PGPCSEADLQKWESIREASRLRHRKRLMVERLFQKIYGENGSKSTSDVSAEDAQNLRQLR
YEEMQKIKSQLKEQDQKWQDDLAKWKDRRKSYTSDLQKKKEEREEIEKQSLEKSERRSKT
FNEMLQDRESPNQMSTMTSRRKLYSSDDGVNEEKLPPMLTMSEVRSQSERVEEKGTTYPT
EIPKQDSTAFAKREATITAEIQLPSKSPVEEQRPASLSSQHSRQMESTRVSATLPRSYQK
TDAARLTSVVTPRPFGSQSRGISSLPRSYTMDDSWKYNGDVEGIKRTQSSSVSISVQRPD
TSQFASRSSSEREAAAPRESVMRLLSPTPTFSSPSQGQAATSKDTLSSTSSPDLTSELGE
GRSSPQTEVSRSQDQFSDMRISINQTPGNSLDFGFTVKWDFSRIFVASVEPGSPAEFSQL
QVDDEIIAINNTKFSYKDTKEWEETMANAQETGNLVMDIRRYGKSGSPETKWIDATSGIY
SSDKSSNLSITAEFSESLQNSNTESKEINGIRDESNTFESKASEPISLKNLKRRSQFFEQ
GSSDSVVPDLPVPTISAPSRWTWDQEGERKRQERWQKEQDRLLQEKYQREQEKLREEWQR
AKQEAERENSKYLNEELMVLNSNSISLTTREPAVATRGEESKAPDSEGTPAEEETRQQQQ
QEKDQEQKRRQAEAEAEAEADEQKRQAERERETSIQIYQYRRPVDSYDIPKREEESSGLL
PSDRNKSRSTTELDDYPTNKNGSNRYLDRTGSSSSSQKSSKKEQVPSGAELERQQILQEM
RKRTSLYDDNSWIRQRSSSVNKEPICLPGIMRRGESLDNLDSPRASSWRQSPWLNQPSGV
YATSSVQDFSRPPPQLLSTSNRAYMRNPSSGVPPPSAGSGKTTTPSPILRSHSPAVPQPG
CQPRNRSVSGKRVCSYCHNILGKGAAMIIESLGLCYHLHCFKCVACDRDLGGSSSGAEVR
IRNNQLYCNDCYLRLKSGRPTAM
NT seq
4752 nt
NT seq
+upstream
nt +downstream
nt
atggaggaggcggaggccgactgcgccctagcgttcgccgaggcccagagatgggtggag
gcagtgacagagaagaattttgagacaaaggattttcgagcctccctggagaatggcgtt
ctgttgtgtgatttgattaataagcttaaacctggtgtcattaagaagatcaatagactg
tccacaccaatagcaggtttggataatataaacgtttttttgaaagcttgtgaacagatt
ggattgaaagaagcccagcttttccatcctggggatctacaggatttatcaaatcgagtc
actgtcaagcaagaagagactgataggagagtgaaaaatgttttgataactttgtactgg
ctgggaagaaaagcacaaagtaacccctactataatggtccctatcttaatttgaaagca
tttgagaatcttttaggacaagctctgactaaggcacttgaagagtccagcttcctgaag
aggagtggcagagacagtggttacggtgatatctggtgcgctgagcgtggagaatttctt
gctcctccaggcaactataagagagaagattcatttgaaagcttggactctttggggtct
aggtcattcacaagctgctcctctgatatcacgttgaggggggcacgtgaaggttgtgaa
agtgacacagattctgaatttacattcaaaatgcaggaccataataaagatgatatgtca
tatcgaaggatttcggctgttgaaccaaagtctgctttaccatttaatcgctttttaccc
aacaagggtagacagccatcctatgtgccggcgcccttaaggaagaaaaagctggacaaa
aatgaggataacagaagaacctgggcaagcccagtctgcatagaagccgatggaacattt
ccaagtaacgagaggagaacttggggcacaaacgtggagaactggccaacagtacaagaa
acttcagactcctcttgttatttggaagaggcagaagaaaagacaagcatacccaacact
gtaagggatgatctttatgtgcgaaagctaagcccaatcatgccaagcccagggaatgct
tttgatcagtttcttcccaaatgctggatcccagaagatgtgaactggaaacgaataaaa
agggaaacttataaaccatggtataaagaatttcagggattcagtcagtttttattactt
caggccctccagacatattctgatgacatcttgtcttctgaaacacatatcaaaattgat
cccactgctggcccaaggctcataacacgcagaaagaatctctcttatacaccagatgac
ctggagatgccagccctggatcctgacttagagaatgatgatttctttgtcagaaagact
ggggctttccatgcaaacccatgtgttcttcgggctttcgaagacttaagaaggctttct
gggcaagacgatcctgtagagcaagatataatactgcagtgtagggaaggtgaacttgta
cttccagacctagaaaaagatgatatgattgttcgccgcattccagcacagaagaaagag
gtgcctctgtcgggagccccagatagataccagccagtccctttccccgaaccctggact
cttcctccggaaattcaagcaaaatttctctgtgtacttgaaaggacatgcccacctaaa
gaaaaaagtaatagctgtagagtgttagttccttcctggaggcagaagaaagatgacatg
ttggctcgtaagatccaatcttggaagctgggaactactgtgcctccagtcaggttcacc
cctggtccctgcagcgaggccgacttacagaagtgggagtccatccgggaggccagcagg
cttaggcacaggaagcggctgatggtggagagactctttcaaaagatttatggtgagaac
gggagcaagtccacgagtgatgtcagcgcagaggatgctcagaacttgcgtcagctgcgt
tacgaggagatgcagaaaataaagtcacagttaaaagaacaagatcagaaatggcaggat
gaccttgcaaaatggaaagatcgtcggaaaagctacacttcagatttgcagaagaaaaaa
gaagagagggaagagattgagaagcagtcgcttgagaagtccgagagaagatctaagaca
tttaacgaaatgctgcaggacagggaatccccaaatcagatgtctacaatgacatcgagg
aggaaactgtattcttctgatgatggagtgaatgaagaaaaacttccccctatgctgact
atgtcagaagtacgttcccagagtgagagagtagaagagaagggaaccacttatccgacg
gaaattcctaagcaagattctacagcttttgcaaaaagggaggctactatcacagctgaa
attcagcttccttcgaaaagccctgtggaagaacaacgcccagcctctttgtcttctcag
cattcacgacaaatggagtccactcgagtttcagctactctccctagaagttaccagaaa
actgatgcggccaggttaacgtctgtggtcacaccgagaccttttggatctcagtcaagg
ggaatctcatcactcccgagatcctacacgatggatgattcttggaagtataatggagac
gtagaaggcattaagagaacccaaagcagttcggtcagcatctctgtgcaaagacctgac
acgagccagtttgcgtccaggtcatccagcgaaagagaggcagcagcacccagagaaagt
gtgatgaggctgctctctcctacacccaccttctcatctccttcccagggccaggctgcc
acttcgaaagacacgttatcttcaacatctagccctgatttaacgtctgagcttggagaa
gggagaagctcaccacagacagaggtctcaagatcacaggatcagttcagtgatatgaga
atcagcataaaccagacgcctgggaacagccttgactttggatttacagtaaaatgggat
ttttccaggatcttcgtagcatcagtcgaaccaggtagcccagcagaattttctcagcta
caggtagatgatgaaattattgctatcaacaacactaagttttcatataaggacacaaaa
gagtgggaggaaaccatggctaatgctcaggaaactggaaacctagtaatggatatcagg
cgctatggaaagtctggttcacctgaaacaaagtggattgatgcaacttctggaatttac
agctcagacaaatcttcaaatctatcaataacagctgaattctcagaaagccttcagaat
tctaatactgaatcaaaagaaattaatggaattcgtgatgaaagcaatacttttgaatca
aaagcctctgaacctatttctttgaaaaacttaaaaaggcgatcacaattttttgaacaa
ggaagttccgattctgtggtgcctgatcttccagtcccgaccatcagtgccccgagtcgc
tggacgtgggatcaggaaggggagcggaagcggcaggagaggtggcagaaagagcaggac
cgcctgctgcaggaaaaatatcaacgtgaacaggagaagctaagggaagagtggcagagg
gctaagcaggaggctgagagagagaattccaagtacttgaatgaggagctaatggtccta
aactcaaacagcatttctctgaccacacgggagcctgctgtggccacccggggcgaagag
tccaaggcacctgacagcgaaggaaccccggcagaggaggaaacgaggcagcagcagcag
caagagaaagaccaggagcagaagcggcgccaggcggaggcagaggcagaggcagaggca
gacgagcagaagcgccaggcggagagagagagggaaacttctatccaaatataccagtac
agaaggccggttgattcctatgacataccaaagagagaagaagaatcttcaggtttgctt
cctagtgacaggaataaatccagatccactactgaactggatgattaccccacaaacaaa
aatggaagcaatagatatttagaccgaactgggagcagtagctcatcgcagaaaagctcc
aagaaggaacaagtcccatcaggagcggagttggagagacagcaaatccttcaagaaatg
aggaagagaacgtccctttatgatgacaatagctggatccgacagcgcagttccagtgtc
aataaagagcctatttgtctgcctgggattatgagaagaggtgaatctctagataacctg
gattccccgagagccagttcttggcgacagtccccttggctcaaccagccttcaggagtc
tatgccacttcctctgtccaagacttcagtcgccccccacctcagctgctgtccacttcg
aaccgtgcctacatgcggaacccctcctccggcgtaccccctccctcagcgggttccggg
aagaccaccaccccgtcccccatactgcgcagccattcccctgcggttccgcagcccggc
tgccagccacgcaacaggtcggtcagtgggaagcgcgtgtgctcctattgtcataacatt
ctgggcaaaggagccgccatgatcatcgagtccctgggtctttgttatcatttgcattgt
tttaagtgtgtggcctgtgatcgtgacctcggaggctcttcctcaggagccgaagtcaga
atccgaaacaaccaactgtattgcaacgactgctatctcagactcaaatctggacggcca
accgccatgtga
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integrated database retrieval system
