Neophocaena asiaeorientalis asiaeorientalis (Yangtze finless porpoise): 112406027
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Entry
112406027 CDS
T08872
Symbol
SKP2
Name
(RefSeq) S-phase kinase-associated protein 2 isoform X1
KO
K03875
F-box and leucine-rich repeat protein 1 (S-phase kinase-associated protein 2)
Organism
nasi
Neophocaena asiaeorientalis asiaeorientalis (Yangtze finless porpoise)
Pathway
nasi04068
FoxO signaling pathway
nasi04110
Cell cycle
nasi04120
Ubiquitin mediated proteolysis
nasi04150
mTOR signaling pathway
nasi05169
Epstein-Barr virus infection
nasi05200
Pathways in cancer
nasi05203
Viral carcinogenesis
nasi05222
Small cell lung cancer
Brite
KEGG Orthology (KO) [BR:
nasi00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
112406027 (SKP2)
09130 Environmental Information Processing
09132 Signal transduction
04068 FoxO signaling pathway
112406027 (SKP2)
04150 mTOR signaling pathway
112406027 (SKP2)
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
112406027 (SKP2)
09160 Human Diseases
09161 Cancer: overview
05200 Pathways in cancer
112406027 (SKP2)
05203 Viral carcinogenesis
112406027 (SKP2)
09162 Cancer: specific types
05222 Small cell lung cancer
112406027 (SKP2)
09172 Infectious disease: viral
05169 Epstein-Barr virus infection
112406027 (SKP2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
nasi04121
]
112406027 (SKP2)
Ubiquitin system [BR:
nasi04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
112406027 (SKP2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
F-box-like
F-box
LRR_At5g56370
F-box_5
LRR_At1g61320_AtMIF1
Motif
Other DBs
NCBI-GeneID:
112406027
NCBI-ProteinID:
XP_024610435
UniProt:
A0A341C6L5
LinkDB
All DBs
Position
Unknown
AA seq
436 aa
AA seq
DB search
MHAFKTPEPADAMHRKHLQEIPDQSSNVTTSFTWGWDSSKTSELLSGMGVSALEKEEVDS
ENIPQELLSNLGHPQSPPRKRLKSKGNDKDFVIVRRPKLNRENFPGVSWDSLPDELLLGI
FSCLCLPELLKVSSVCKRWYHLAFDESLWQTLDLTGRNLHPDVVGRLLSRGVVAFRCPRS
FMDQPFVERFSPFRVQHMDLSNSVIDVSTLHGLLSHCSKLQNLSLEGLRLSDPIVNNLAQ
NTNLVRLNLSGCSGFSESALKTLLSSCCRLDELNLSWCYEFTEKHVQVAVAHVSETVTQL
NLSGYRKNLQRSDVSTLVGRCPSLVHLDLSDSVMLKSDCFPEFFQLNYLQHLSLSRCYDI
IPETLLELGEIPTLKTLQVFGIVPDSTLQLLKEALPHLQINCSPFTTIARPTTGNKKNQE
IWGIRCRLTLQKPSCL
NT seq
1311 nt
NT seq
+upstream
nt +downstream
nt
atgcacgcatttaaaactcccgaacctgcggacgccatgcacaggaaacacctccaggag
attcccgaccagagtagcaacgttaccaccagcttcacgtggggatgggattctagcaag
acttctgaactgctttcaggcatgggggtctccgccctggagaaggaggaggtggacagt
gagaacatcccccaggaactgctttcaaacctgggccacccgcagagccccccacgaaaa
cggctaaagagcaaagggaatgacaaggactttgtgattgtccgcagacctaagctaaat
cgagagaactttccaggtgtttcatgggactcccttccagacgagctgctcttaggaatc
ttctcctgtctgtgcctccctgaacttctgaaagtctccagtgtttgtaagagatggtat
catctagcgttcgacgagtctctctggcagaccttagacctcacgggcagaaacctccac
ccagacgtggttggtcggctgctgtctcgaggggtggttgccttccgctgcccacgatcg
tttatggaccaaccgtttgttgaacgtttcagcccttttcgtgtacagcacatggacctg
tcgaactcggtgatcgatgtgtctaccctccacggccttctgtctcactgctccaagttg
cagaatctcagtctagaaggcctacggctttcagatcccattgtcaacaatcttgctcag
aacacaaatttagtgcgattaaacctttctgggtgttctggattctctgaatctgccctg
aagactttgctgagcagctgttgcagattggatgaactgaacctctcctggtgctatgaa
ttcactgaaaagcatgtgcaggtggctgtcgcacacgtgtcagagactgtcacccagctg
aatctcagcgggtaccgaaagaatctgcagagatcggatgtctctaccttagttggaaga
tgtcccagtcttgtccacctagacttaagcgatagtgtcatgctgaaaagtgactgcttt
ccggaattcttccagctcaactacctccaacacctatcactcagtcggtgctatgacata
atacctgaaactttacttgaactcggagaaattcccacactaaaaacactacaagtcttt
ggaatcgtgccagacagtacccttcaactattaaaggaagcccttcctcatctacaaatt
aattgttcccctttcaccaccatcgctaggccaaccactggcaacaaaaagaaccaggag
atatggggcatcagatgccgactgacactgcagaagcccagttgtctatga
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