Neophocaena asiaeorientalis asiaeorientalis (Yangtze finless porpoise): 112406185
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Entry
112406185 CDS
T08872
Symbol
RTTN
Name
(RefSeq) rotatin isoform X1
KO
K16484
rotatin
Organism
nasi
Neophocaena asiaeorientalis asiaeorientalis (Yangtze finless porpoise)
Brite
KEGG Orthology (KO) [BR:
nasi00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
nasi03037
]
112406185 (RTTN)
Cilium and associated proteins [BR:
nasi03037
]
Primary cilia and associated proteins
Other primary cilia associated proteins
112406185 (RTTN)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RTTN_N
Motif
Other DBs
NCBI-GeneID:
112406185
NCBI-ProteinID:
XP_024610680
UniProt:
A0A341C7A6
LinkDB
All DBs
Position
Unknown
AA seq
2230 aa
AA seq
DB search
MVLTGLIRKLGHQLAEIRARALKNILCKIEHSLICCADLVQERLLFLHLLEWFNFPSVPM
KEEVLSLLNRLVKYPPAVQHLVDLGAVEFLSKLRSNVEPNLQAEIDGILDGLFILPSEVP
ELHSASYQTSQTELPEQPEILTGYFPQDKSTFQQMEVPPRPVAANPTAKCLKFSTFPWLP
LTTADRHVLSSNESSLRSSNHTLIWNTCELLKDVIMQDFPAEIFLQRPKIVQSLLSLLKL
AFGGDGKHRLALQSVSCLQQLCTYLRNRLNFHRDPSFFSSKQDTVSQNSSLSYCHEARVT
HHSQNPSPGSSSPRPSVVGRTGQRPRGDGQDWDAVSSSGSSSHAHVNSRVSIPSPLDMVH
LDLPELEAEDTLELQFQQLSLPQLCVSILECAVPLLRTGSRQMIIRVLELLAEDMVLIGE
AISADIWDDSSLFAIDMKKKLLMVLGSLGDSMCYHKSNISLEQPEAVLVHHRMAFVSISL
FAVRLLQTLLPVEKASHFLPEPMSAALFLVSLDMPVSLEYPNIHEAVVAYLEQLNSENYS
IYKRTAEAVYSLECTCNFLSDVGKEGEKNLLELVELADQALHSFSYHQHFPLIKEIICIC
SKIWKSAQASPLLQGESQKVFLRMLSHPLPQVKVKTYHCCLEIVKECLGVHNVSKPVSSL
CNGIHFLLHPKVLYEISAFGIQEPKNEVNATAKAILMHLLQGRLRMTALTWNKFIESLCP
VIPVLQGYADTEDPLGNCILLLSKASSEAGEGILPCTTWLKSILRLLLVKKPSVRVLALK
LLASHLTREEGADTKRPSIDARVLSRVTDLFIVKKPIELKLDDRRELIIKLETVEKVYDI
FISDNIDLILRKSAAEQLAVIMQDIKMHALVKKLCLTDKIIEYLNKCVSQDGEVIECLVQ
PSLTLLRKVLCADPVLRVSLSQQPSLLTLLFRVSLIFHEDCTIVTEVGALFCLLLFDEVS
RMDMWSDNLSNKPSSPSVFSLPVSVSRRYHLPVHVLGHHAVSPYSIVLPLSAECLALKPV
SDMLRIAWNLSWYHGSDNLLKQMNSETKIQEFLDTLKLSTEDTLALKMTHTASGLKDCLR
SIVQAAAHRGVRAALTRMSFYLLNDRLSFKGGTGPCGITLKSLSWHTTLNRFLQVLPACT
EDEKLLIDIIHFLNKLLKEQRKNVSVELLNWLLELLLRHSPNPLLELLLLTESQAREEAD
DIRTAVRQQLQKELVALFNTLLLGSVALTDRKCLELFYVFQTQLALKLLQCLRVTDAPRF
YGLPSLERTLRGMAHLTAFPGWSSHSPFTKPLEICVKYLSGLLEVITSFYVERGGNAMSF
MGKGVTKSTVLCLLHLSHEMMAQAQSSEWMSLWFLPLGSHSEEHATTQQGLAWLIPLWVD
RDPEVRFTSLGLGSALTTLETGCVALANSCQNISGGLWGTVVNILLDQSECSMVRREAAF
IFQNLLVIPMPSEIIKGYTWQGPCVHDEDSGLSLIGKPALQALLYHCHFYEHLNQMVKHC
YLGRYTFDLNCSALNGTSEGNDLNGLDDSFKFWRAPSRMSSQDRDPSSLSTLETMVAASS
ASAEFQPLVPCTAPVPEASHDQFVAQGQHETASPRLPHDSSLSAPLPRQCVFVTPPLLSA
MCSLLDSLLATTPGDTANAFRQARLIELLCSIADATLIETSVQELQALLPASPPVEHTQA
QVSFLLEYLSSLSRLLQSCLLVDPDLVIQDELLKPLITNIVRVLTICTKDISDIELISAF
YQTWTHLFNLLATLLRKAGPASFPSITMGLARYWATMVDMFCKCVGLSSTCPTLCTASLQ
FLSILLTEEAKRYLQDKDKTSLCHSPMMASLLDKTQESQKSLEQLNEVILQCYEVKSSRD
VLKRVAVNALMSLLAVSRRAQKHALKAHLIDSCVEQMKHVHAQLNLESLRPGRAALKKKE
DGFIKELSIAMQLLRNCLYQNEECKEAALEAHLVPVLHSLWPWLLMDDSLMQTALQLLCV
YTANFPNGCSSLCWSSYGQYPVQTAHRGAPGSSLMLYILKMASQVPLENTAVQQMVFTFL
SNLALSHDCRGVIQKTNFLQNFLSLTLPKGGNKHLSNLTILWLKLLLNISFGEDGQQMIL
RLDGCLDLLTEMSKFKHKSSPYLPLLIFHNICFSPANKPKILANEKVISVLASCLESENQ
NAQRIGAAALWALIHNYQKAKTTLKNPSIKRRVDEAYSTAKKTFLNSEETPLNAYYLKCL
ENLVQQLNSS
NT seq
6693 nt
NT seq
+upstream
nt +downstream
nt
atggtcctgacggggctcatcaggaaactgggtcatcagctggccgagatcagggcacgc
gctctcaagaatattctctgcaagattgagcacagtttaatctgctgtgctgatctggtt
caggagaggctcctttttctccatttgctggaatggttcaatttcccgtccgttccaatg
aaagaagaggttctgagtctgttgaacagattggttaagtatcccccagcagtccagcat
ttggttgaccttggtgcagtcgaattcttatctaaacttcgttctaatgtggagccgaat
ctacaggctgaaattgatggcattctggatggactttttattcttccttcagaagttcct
gaactacattctgcatcttaccaaaccagtcaaactgaattgccagagcaacctgaaatc
ttaacgggatattttcctcaagacaaaagtactttccagcagatggaagtgcctccaaga
cctgtggcagcaaatccgacagcgaagtgtttgaagttttctaccttcccttggctcccc
ctgaccacagctgataggcatgttctctcctctaatgaaagctctttaagaagtagtaac
cacactttaatctggaacacctgtgagctgttgaaagatgttatcatgcaagattttcct
gctgagattttccttcaaaggccaaaaattgttcagagccttttatctctgttgaaactg
gcctttggaggagatggaaaacatcgcctggcattgcagtcagtgtcctgcttgcagcag
ctgtgcacgtatttaagaaacagacttaactttcaccgagatccaagtttcttctctagt
aaacaagatacagtttcccaaaattcttctctgtcttattgtcatgaagcaagagtcact
catcattcccagaatccttctccaggaagcagcagccctcggccttccgtagtgggacgc
acaggccagcgacccagaggagacggccaggattgggacgccgtgtcttccagtggaagt
agtagtcacgctcatgtcaactcaagggtctccatcccttcccctttggacatggtgcac
ctggacctgccagagctggaggctgaggacacgctagagctgcagttccagcagctgagc
ctgccccagctctgcgtctccatcctggagtgtgccgttcctctcttaagaacaggtagt
agacagatgataataagagttctggaattgcttgcagaggatatggtacttattggtgaa
gcgatttcagcagatatctgggatgacagcagtctttttgctatagatatgaaaaagaaa
ctgctcatggtgttggggtcccttggagacagcatgtgctaccataaaagcaacatcagt
ttggaacaaccagaggcggtgctggtgcaccacaggatggcctttgtcagcatttcgctg
tttgcagtccgactgctgcagacgcttctccctgttgaaaaggcaagccactttttacca
gagcctatgtcagcagcattatttctagtttctttggacatgcctgtttctttggaatat
ccaaatattcatgaagctgttgtggcctatttggaacagctgaattctgaaaactacagt
atttataaacgaactgcagaggctgtttattcacttgagtgtacctgtaacttcctgtct
gatgttgggaaggagggcgagaagaatctcttagaattagtggagctggcagaccaagcc
ttacatagcttttcctatcatcagcatttccccctaataaaggaaatcatctgtatttgt
tcaaagatctggaaatctgcacaggccagtccattattacaaggagaaagtcagaaggtg
tttctacgtatgttgtctcaccctttgccacaagtgaaagttaaaacttaccactgttgt
ctggaaattgttaaggaatgtttaggtgtccataatgtcagtaaacctgtgtcttccctt
tgtaatggaattcattttctacttcacccaaaagttctgtatgaaatctctgcgtttggt
attcaagagcccaaaaatgaggtgaatgccactgccaaggccatcctgatgcatctgctg
caggggcgactgaggatgacagcactgacctggaacaagtttatcgagtccctgtgtcct
gtcatcccagtgctacagggctatgctgacacagaggatcctttgggtaactgcattctc
ctcctaagcaaagcgagttccgaggctggtgaagggattctcccctgtaccacctggtta
aagtccatactgcggctcctgctggtgaaaaagccatctgtccgggtgctggcattaaag
cttttagcaagtcaccttacaagggaagagggggcggataccaagcgcccttcaatcgat
gccagagttctctccagagttactgatttatttattgtgaaaaagcctattgaactcaaa
ttggatgacagaagagagctgattattaagctggagactgttgaaaaggtatatgacatc
tttatctcagacaatattgatcttattttgagaaagtcagccgcagaacagttagctgtg
attatgcaagatattaaaatgcatgctctggtgaaaaaattatgcttaactgacaagata
attgagtatttaaataaatgtgtgagtcaggatggagaggtaatagagtgtctagtacag
ccaagcctcacgctcctgaggaaggttctctgtgctgacccagtcctgcgtgtttccctc
tcccaacaaccttctctcttgaccctgctgttcagagtttccttgatatttcatgaagat
tgtaccatcgtgactgaagttggagcattattttgtcttctgttatttgatgaagtatca
agaatggatatgtggtctgataatctttccaataaaccttcttcaccatcagtcttcagt
ttgcctgtttcagtttctagaaggtatcatctaccagtacatgtacttggccaccatgct
gtgagtccttactccatagttttgccgttatctgctgagtgtttggccttgaagccggtc
tcagatatgctgagaatagcttggaacctatcatggtatcatgggagtgataatctgttg
aagcaaatgaactctgaaactaaaatccaagaatttctagatacattgaagttatccact
gaggacacccttgctctgaagatgacgcacacagcgagcgggctgaaggactgcctccgc
tccattgttcaggctgcagcccacaggggcgtgagggctgctctcacaaggatgagtttt
tatcttctgaatgacaggttgtctttcaagggtggcactggcccatgtgggattaccttg
aagtccttgtcttggcacaccacactaaacagatttttacaagtacttcctgcttgcacc
gaagatgagaaactgctaatagatatcatacattttctaaataagttattgaaggaacaa
agaaaaaatgtatccgtagaacttctaaactggcttctcgaattacttcttagacatagt
ccaaacccactattggagctgctgcttctgacagagtcccaggcgcgagaggaagcagat
gacatccgcaccgccgtccggcagcagctccagaaagaactggtcgctctcttcaacacc
ctgctgctcggttccgtggcacttaccgacaggaaatgcttggaacttttttacgttttc
caaacgcagctggctctgaaactgctccagtgtctgagagtcacggacgctcctcgcttc
tacggcctgccgtcccttgagaggaccttacgagggatggcccaccttacagcatttccg
ggatggagctcacactctcctttcacaaagccactagaaatttgtgtgaagtacttgtca
ggtctcctcgaagtcattacttctttttatgtggagcgtggaggaaatgctatgtccttc
atgggaaaaggtgtcacaaagagcacggttctctgcttgcttcacttatcccatgagatg
atggcccaggcccagagctcggaatggatgtcactttggttcttgcctttgggtagtcac
agtgaagaacatgctaccactcaacaggggttggcttggttgattccgttgtgggttgac
cgagacccagaggtgaggttcacttcactgggattaggatcggcactgactacccttgaa
actggctgtgtggccttagcaaacagttgtcaaaacatttctggtgggctctggggaacc
gtggtgaacattcttctggaccagtcggagtgtagcatggtacgccgggaggctgcattt
atttttcaaaatctccttgtaattccaatgccttcagaaatcataaagggttatacttgg
cagggcccctgtgttcatgatgaggactctggcctgtcgctcataggaaaacctgccctt
caggctcttttgtaccactgccatttttatgaacatttgaatcagatggtaaaacattgt
tacctgggacggtatacgtttgatttgaattgttctgctcttaatggaacttctgaaggc
aatgacttaaatggtttagatgactcattcaagttttggagggctccatctcggatgtcc
agtcaagatcgagatccaagttctctctccactttggaaacaatggtggcagcttcgtcg
gcaagtgctgaatttcagccgctagtgccctgcacggcgcctgtccctgaagcctcacat
gaccagtttgtggctcaaggtcagcatgaaactgcatctccacggcttcctcatgattca
tccctttctgctcctctgcccagacagtgtgtttttgtcactccgcctcttctttccgcg
atgtgcagcctcctagacagcctcttggcaacgactccaggcgacactgcaaatgctttt
cgacaagctcgtctcatagagcttctttgtagcatcgcagatgccaccctcatagagaca
agcgtccaggagctccaggccctgctgcccgcgtcacctcctgttgaacacactcaggct
caggtatcctttctcctagagtacctgtcctctttgtccaggcttcttcagtcatgttta
ttggtagatcctgaccttgtgattcaggatgagcttctgaaacctcttatcacaaacatc
gtcagagttctcaccatatgcaccaaagatatatcagatatagagttaatatcggctttt
tatcagacatggacacatttatttaaccttctggccacactcctgaggaaagctggccct
gcctctttcccatctattacgatgggtctggccaggtactgggcgacgatggtcgatatg
ttctgcaaatgtgtgggtttgtctagcacctgccccactctgtgtactgccagcctgcaa
ttcctttctattctcctgactgaagaagcaaaaaggtatctccaggataaggataaaaca
agtttatgccacagtccaatgatggcttcacttcttgataaaacccaggaaagtcagaaa
tctctagaacaacttaatgaagtaattcttcagtgttatgaagtaaaatcctccagagat
gtcctgaaaagagtcgctgtgaatgcactgatgtcgcttctggccgtcagtagaagagca
cagaaacacgctctgaaggcccatctaatagacagttgcgtggagcagatgaagcacgtt
catgcacagctgaacctggaatctctgaggcctgggagggcagcactgaagaaaaaggag
gatggttttattaaagagttaagcattgccatgcagctcctaagaaattgtctttatcaa
aatgaagaatgtaaagaggcagccctggaagctcatcttgtccctgtcttgcactctctc
tggccttggcttttgatggatgattcactgatgcaaactgccctgcagctgctttgtgtc
tatactgcaaattttccaaatggttgcagttctctctgttggtcaagttacggacagtat
cctgttcaaactgcacatcgaggggcccctggcagctccctgatgctgtatatcctgaag
atggcttcccaggttcctctcgagaatactgcagtccagcagatggttttcacgtttctt
tcaaacctggccttgtctcatgactgtagaggggtaattcaaaaaactaacttcttacag
aacttcctgtctctaacattgccaaaaggaggaaataaacatctcagtaatctgaccatt
ctttggttgaagttactcctgaacatatcgtttggagaagatgggcagcaaatgatcctg
aggctcgatggctgtttagacttacttacagagatgagcaaattcaagcataagagcagc
ccttatttacctcttcttatttttcataacatttgcttcagccctgccaataagcccaag
atcctggctaatgaaaaagtcattagtgtgctagcttcctgtctggaaagtgagaatcaa
aatgctcagaggattggagcagctgcgctttgggctttgattcacaattaccaaaaggca
aaaacaactttgaaaaatccatcaataaaaagaagagtggatgaagcatattccacagca
aagaaaactttcttaaactcagaagaaactcctctaaatgcctattatttgaaatgtctt
gaaaaccttgtgcagcaacttaactcttcatga
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integrated database retrieval system
