Neophocaena asiaeorientalis asiaeorientalis (Yangtze finless porpoise): 112406238
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Entry
112406238 CDS
T08872
Symbol
SMC4
Name
(RefSeq) structural maintenance of chromosomes protein 4 isoform X1
KO
K06675
structural maintenance of chromosome 4
Organism
nasi
Neophocaena asiaeorientalis asiaeorientalis (Yangtze finless porpoise)
Brite
KEGG Orthology (KO) [BR:
nasi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
nasi03036
]
112406238 (SMC4)
Chromosome and associated proteins [BR:
nasi03036
]
Eukaryotic type
Chromosome condensation proteins
Condensin I
112406238 (SMC4)
Condensin II
112406238 (SMC4)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SMC_N
SMC_hinge
AAA_15
AAA_23
AAA_21
AAA_29
ATG17_like
Mce4_CUP1
ABC_tran
Motif
Other DBs
NCBI-GeneID:
112406238
NCBI-ProteinID:
XP_024610731
UniProt:
A0A341C7H9
LinkDB
All DBs
Position
Unknown
AA seq
1288 aa
AA seq
DB search
MPRKGTQPSTARRRQEGPPQSPDGASSDAEPEPLPGRAGSLAPATAETPSEEIDNRSLEE
ILNSIPPPPPPAMTNEAGAPRLMITHIVNQNFKSYAGEKILGPFHKRFSCIIGPNGSGKS
NVIDSMLFVFGYRAQKIRSKKLSVLIHNSDEHKDIQSCTVEVHFQKIIDKEGDDYEVVPN
SNFYVSRTAYRDNTSVYHISGKKKTFKDVGNLLRSHGIDLDHNRFLILQGEVEQIAMMKP
KGQTEHDEGMLEYLEDIIGCGRLNEPIKVLCRRFEILNEHRGEKLNRVKMVEKEKDALEG
EKNIAIEFLTLENEIFRKKNHVCQYYIYDLQKRIAEMETQKEKIHEETKEINEKSNILSN
EMKAKNKDVKDIEKKLNKITKFIEENKEKFTKLDLEDVQVREKLKHATSKARKLEKQLQK
DKEKVEEFKSIPAKSENIITETTTRNNALEKEKEKQEKKLKEVMDSLKQETQGLQKEKES
REKELMDFSKSVNEARSKMDVAQSELDIYLSRHNTAVSQLSKTNEALMTASETLRERKAA
IGDIQAKLPQIEHELKEKEKQLQKLTQEEINFKSLVRDLFQKVEEAKSSLAMNRSRGKVL
DAIIQEKKSGRIPGIYGRLGDLGAIDEKYDIAISSCCHALDYIVVDSIDTAQECVNFLKR
QNIGVATFIGLDKMAVWAKKMTKIQTPENTPRLFDLVQVKDEEIRQAFYFALRDTLVADN
LDQATRVAYQKDRRWRVVTLQGQIIEQSGTMTGGGSKVMKGRMGSSVVVEISEEEVNKME
SQLQRDSQKAVQIQEQKVQLEEAVVKLRHSEREMRNTLEKFTASIQRLSEQEEYLNVQVK
ELEANVLATAPDQKKQKLLEENVTAFKTEYNNVAERAGKVEAEVKRLHNIIVEINNHKLK
AQQDKLDKINKQLDECASAITKAQVAIKTADRNLKKAQDSVFRTEKEIKDTEKEVDDLTA
ELKSLEDKAAEVVKNANAAEESLPEIQKEHRNLLKELKVIQENEHALQKDALSIKLKLEQ
VDGHIGEHNSKIKYWQKEISKISLHPIEDNPIEEIPLLSPEDLEAIKNPDSITNQIALLE
AQCHEMKPNLGAIAEYKKKEELYLQRVAELDKITYERDNFRQAYEDLRKQRLNEFMAGFY
IITNKLKENYQMLTLGGDAELELVDSLDPFSEGIMFSVRPPKKSWKKIFNLSGGEKTLSS
LALVFALHHYKPTPLYFMDEIDAALDFKNVSIVAFYIYEQTKNAQFIIISLRNNMFEISD
RLIGIYKTYNITKSVAVNPKEIASKGLC
NT seq
3867 nt
NT seq
+upstream
nt +downstream
nt
atgccccgtaaaggcacccagccctccaccgcccggcgcagacaggaagggccgccgcag
tccccggacggcgccagcagcgacgcggagcccgagccgcttcccggccgcgcggggagc
ctcgcgcctgccaccgcagagactccaagtgaggaaatagataatagaagtttagaagag
attttgaatagcatccctcctcccccacctccagcaatgaccaatgaagctggagctcct
cgtcttatgataactcatattgtaaaccagaacttcaaatcctatgctggggaaaaaatt
ctgggacctttccataagcgcttttcctgtattattgggccaaatggcagtggcaaatcc
aatgttattgattctatgctttttgtgtttggctatcgagcacaaaaaataagatctaaa
aaactctcagttctaatacacaattctgatgaacacaaggatattcagagttgtactgta
gaagttcattttcaaaagataattgataaggaaggggatgattatgaagtagttcctaac
agtaacttttatgtatccagaacggcctacagagataatacttctgtttatcacataagt
gggaagaagaaaacatttaaggatgttggaaatcttcttcgaagccatggaattgacttg
gaccataatagatttttaatcttacagggtgaagttgaacaaattgctatgatgaaacca
aaaggccagactgaacatgatgagggtatgcttgaatatttagaagatataattggttgt
ggacggctaaatgaacctattaaagtcttgtgtcggagatttgaaatattaaatgaacac
agaggagagaagttaaacagagttaaaatggtggaaaaggaaaaggacgccttagaagga
gagaaaaacatagccattgaatttcttaccttggaaaatgaaatatttagaaaaaagaat
catgtttgtcaatattacatttatgatctgcagaaacgaattgctgaaatggagactcaa
aaggaaaaaattcatgaagagaccaaagaaattaatgagaagagcaatatactgtcaaat
gaaatgaaagctaagaataaagatgtaaaagatatagagaagaagctgaacaaaattaca
aaatttattgaggagaacaaagaaaaatttacaaaactagatttagaagatgttcaagtt
agggaaaaattaaagcatgctacaagtaaagccagaaaactggaaaaacaacttcaaaaa
gataaagaaaaggttgaagaatttaaaagcatacctgccaagagtgagaatatcataact
gagacaacaactagaaataatgcccttgagaaagaaaaagaaaaacaagaaaaaaaatta
aaggaagttatggatagccttaaacaggaaacacaaggacttcagaaagaaaaagaaagt
cgagagaaagaacttatggatttcagcaaatcagtaaatgaagcacgttcaaagatggat
gtagcccaatcagaacttgatatctatctcagtcgtcataataccgcagtgtctcaatta
agtaagaccaatgaagctctaatgacagcttctgagactctcagagaaaggaaagctgca
attggagatatacaggcaaaactccctcaaattgaacatgaactaaaggagaaagaaaaa
caacttcaaaaacttacacaagaagaaataaatttcaaaagtttggttcgtgatcttttc
caaaaagttgaagaagcgaagagttccttagcaatgaatcgaagtagggggaaagtcctt
gatgcaataattcaagaaaaaaaatctggcagaattccaggaatatatggaagattgggg
gacttaggagcaattgatgaaaaatatgatattgctatttcatcctgttgtcatgcatta
gactacattgttgttgattctatcgatacggcccaagaatgtgtaaacttccttaaaaga
caaaatattggagttgcaacctttataggtttggataagatggcagtgtgggcaaagaaa
atgaccaaaattcaaactcctgaaaatactcctcgattatttgatttagtacaagtaaaa
gatgaggaaattcgccaagctttttactttgccttacgggataccttagtagctgacaac
ttagatcaagccacaagagtagcatatcagaaagatagaagatggagagtggtaacatta
caggggcaaatcatagaacagtcaggtacaatgactggtggtggaagcaaagtaatgaaa
ggaaggatgggttcatcagttgttgttgaaatctcagaagaagaggtaaataaaatggaa
tcacagttgcagagagactctcaaaaagcagtgcaaattcaggaacagaaagtacaattg
gaagaagcagtagttaagttaaggcatagtgaacgagaaatgaggaatacactagaaaag
tttactgcaagcatccagcgtttatcagagcaagaagaatatttgaatgtccaagttaag
gaacttgaagctaatgtacttgctacagcccctgaccaaaaaaagcagaaattgctagaa
gaaaatgttactgctttcaagaccgagtataacaatgtggctgagagagctggtaaagtg
gaagctgaggttaaaaggttacacaatattatcgtagaaattaataaccataaactcaag
gcccaacaagataaacttgataaaataaacaaacaattagatgaatgtgcttctgctatt
actaaagcccaagtagcaatcaagactgctgacagaaatcttaaaaaagcacaagactct
gtctttcgcacagagaaagaaataaaagatactgagaaagaagtagatgacttaacagca
gagctaaaaagtcttgaagacaaagcagcagaggtcgtaaagaatgcaaatgctgcagag
gagtccttaccagagatccagaaagaacatcgtaacctacttaaagaactaaaagtaatt
caggaaaatgaacatgctcttcaaaaagatgcacttagtattaagttgaaacttgaacaa
gtagatggtcatattggtgaacataattctaaaataaaatactggcaaaaagagatttca
aaaatatcattgcatcccatagaagataatcctattgaagagattccacttctaagccca
gaagatcttgaagcaatcaagaacccagattccataacaaatcaaattgcactcttggaa
gcccagtgtcatgaaatgaaaccaaaccttggtgccattgcagagtataaaaagaaggaa
gaattatatttacagcgggtagcagaattggacaaaattacttatgaaagagataatttt
agacaggcatatgaagatcttcggaaacaaaggcttaatgaattcatggcaggtttttat
ataataacaaataaattaaaggaaaattaccaaatgcttactttgggaggtgatgctgag
ctggagcttgtagacagcttggatcctttctctgaaggaatcatgttcagtgtccgacca
cctaagaaaagttggaagaagatcttcaacctttcaggaggagagaaaacacttagttca
ttggctttagtatttgctcttcaccactacaaacccactcccctgtacttcatggatgag
attgatgcagcccttgatttcaaaaatgtttccattgttgcattttatatatatgaacaa
acaaaaaatgcccagttcataataatttctcttcgaaataatatgtttgagatttcagat
agacttattggaatttacaagacatacaatataacaaaaagtgttgcagtaaacccaaaa
gaaattgcatctaaaggactttgctaa
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