Neophocaena asiaeorientalis asiaeorientalis (Yangtze finless porpoise): 112406431
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Entry
112406431 CDS
T08872
Symbol
SSC5D
Name
(RefSeq) soluble scavenger receptor cysteine-rich domain-containing protein SSC5D
KO
K25740
soluble scavenger receptor cysteine-rich domain-containing protein SSC5D
Organism
nasi
Neophocaena asiaeorientalis asiaeorientalis (Yangtze finless porpoise)
Brite
KEGG Orthology (KO) [BR:
nasi00001
]
09190 Not Included in Pathway or Brite
09193 Unclassified: signaling and cellular processes
99995 Signaling proteins
112406431 (SSC5D)
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SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SRCR
SRCR_2
Motif
Other DBs
NCBI-GeneID:
112406431
NCBI-ProteinID:
XP_024610978
UniProt:
A0A341C9C1
LinkDB
All DBs
Position
Unknown
AA seq
1396 aa
AA seq
DB search
MRVLACLLVALMGIQAVEWLRLADGPHGCAGRLEVWHGGRWGTVCDDGWDLRDAAVACRE
LGCGGALAAPGGAFFGEGAGPVWLSELACRGGEQQLGLCPHGGWKAHICSHEEDAGVVCA
GQRVSDSRDWDDSPSVLDGDPWPGLSGELSPGSEEAPVMPAPRPAGTPQSGSRKKSPRPP
KPTKSTRAPLLTAGAPRQGPAPRLRLADGPHGCAGRLEVWHSGRWGSVCDDAWDLRDAAV
ACHELGCGGALAAPGGAFFGEGAGPILLDDLRCRGNETALRFCPARPWGQHDCHHREDAG
AVCDGMPLGYVPPVAPAVGSNSSRPRETASRPPPPTVSQAARIAGISPPPASPAAPQEPG
PEAGSPQLRLVAGPSRCSGRLEVWHGGRWGTVCDDSWDLRDSAVVCRELGCGGPRQPDPA
AGRFGWGAGPIWLDDVRCVGTEASLADCPAAPWGKHNCAHNEDVGVTCTGTPGLDSISDP
FSWSWIPGLGRDPDAWLPGELATKPSARRTPGVPEKTTTKAPGKIPKSTKKWMTKNAKRP
TTQPTVIPTPKHSRATGTQSPPELTSLTTTTLTTEASRRPTSEFTTRLTTEDPHRLTSHT
TERRTPRVPRERTSKTLATPTTQGPRELTSEATMEPSAEIPGVGTPESSKDPAPSPTGAS
GLFRVRLADGPNRCAGRLEVWHAGRWGTVCDDSWDLRDGMVACWELGCGRVRPRVGKTHY
GPGTGPIWLDDVGCKGSEASLSDCPARAWGQHNCDHEEDVGLTCTGYADEEDYPPWTWDP
TSGEDLAKGTTAAAVPAHTLPWGTAGSTGAPSPTTRRLPSTGGEDGYEPSWTWATPSGEV
PAKGTPTAGIPGPSGTAGTIRSPGHPSLAPRVRGDTGSLRKLWPGRRLRPTAARTAPPTT
SPAPSASPGPPGPVLTSDSAPQLIPTAASTPEVTSDPPATLPPSPDPASWMNSHRTLTTP
GLTLSTPDATVLPALTPGLSPTPPPTMPKELTSDPSAPAVVTRLSPTSELTPESDTTPVW
DTSPYPNTTPEPSSFPDPSTSPHPTTIPHSTMTSHPTTTSHPTTTLYPTTTPHSKTSQPT
TTPYPTMTSHPTXXXXXAQPITTPYPTTTPHPTTTPQPTTTPPPITSAQPITTPYPATTL
HLTTTAYPTMTPHPTSTPTVTARSLLTSLGTELPFPSSAPTVKPSPHPRLTFTGAPHPST
SQMWSLEPCPATESSPCRPSPAPSIDTPSPENFKPPTSQSPKVTSPPTQTPHSASDPTVT
PDLHLSPTAPTLDQPPPDRLSLGPTPGQSPGPLGPCEAPVPPVRVMACDPPALVELVAAV
RDVGSQLQRLTQALERDQRERHALGLGLTQLVEAAQGLGQLGEVVKRLAEVAWPPSTPAP
TTTTPEEEERPLRGDV
NT seq
4191 nt
NT seq
+upstream
nt +downstream
nt
atgagggtcttggcctgcctcctcgtggctctgatggggatccaggctgttgagtggctg
cgtctggccgatggcccccacgggtgcgcgggccgcctggaggtgtggcacggcgggcgc
tggggcaccgtgtgcgacgatggctgggacctgagggatgctgctgtggcctgccgcgag
ctgggctgtgggggcgcgctggctgcccctggaggcgccttcttcggggagggcgcgggg
cccgtgtggctgagcgagctggcctgccggggcggtgagcagcagctgggcctctgcccc
cacggcggctggaaggcccacatctgctcccatgaggaggacgcaggcgtcgtctgtgca
ggtcagcgtgtgtcggactccagggattgggacgactcaccttcagtcctggatggggac
ccctggccggggctgtctggggagctgagccccggctctgaggaggccccggtgatgcct
gccccccgcccagccgggaccccccagagcggctcccggaagaagagccccaggccgccc
aagcccaccaagtccactagggcccctttgctgactgccggagccccccgtcagggcccg
gcccccaggctgcgtctggcagacggcccccacgggtgcgcgggccgcctggaggtgtgg
cacagcgggcgctgggggtccgtgtgtgacgatgcctgggacctacgggacgccgctgtg
gcctgccacgagctgggctgcgggggcgcgctggctgcccctggaggcgccttcttcggg
gagggggctggacccatcctcctggacgatcttcgctgtcggggaaacgagacggccttg
cgcttctgccctgcgcggccctggggccagcatgactgtcatcaccgagaggacgctggg
gccgtgtgtgacggtatgcctctgggatatgtccctcccgtggcccccgcggtgggcagc
aacagctccaggcccagggaaactgcatccaggcccccgccccccacggtgagccaggct
gcgcggatagcaggcatttcacctccgcccgcttcccctgcggcccctcaggagcctggg
cctgaagctgggtccccccagctgcgcctggtggccgggcccagcaggtgctcaggccgg
ctggaggtgtggcacggtgggcgctgggggaccgtgtgtgacgacagctgggacctgcgg
gactcggctgtggtctgccgggagctgggctgcggtggacctcggcagccagaccctgct
gccggccgcttcggctggggcgccggccccatctggctggacgatgtgaggtgtgtgggg
accgaggcttccctcgctgactgccctgccgctccctgggggaagcacaattgtgctcac
aacgaggacgttggagttacctgcactgggacccccggcctggactccatctcagacccc
ttcagttggagctggatccctggcctgggtagagatccagatgcctggctcccgggggag
ctggccaccaagccttctgcgaggcggacccccggcgttcctgagaaaaccaccaccaag
gccccagggaagatacccaaaagcacaaagaagtggatgaccaaaaacgcaaagaggccg
accactcagcccaccgtgataccaacccctaagcactccagggccacgggcacccagagt
cccccagaactgacctcactgaccaccaccactctgaccactgaggcctctcgaagaccg
acctccgagtttaccaccaggctgaccacggaggaccctcacaggctgacctcacacacc
accgaaaggcggactccccgggtcccccgggaacggacctctaagaccctggcaacaccg
accacccagggcccccgagaactgacctctgaggccaccatggagccatcggccgagatc
ccaggagtaggtactccagagtcctccaaagacccagccccctcccccactggggcatca
ggcctgttccgggttcgtctggctgatgggcccaaccggtgtgccgggcggctggaggtg
tggcacgctggacgctgggggacagtgtgtgatgacagctgggacctgcgggatggcatg
gtggcctgctgggagctgggctgcggaagggttcggccccgagtgggcaaaacccactac
ggccctggcaccgggcccatctggctggatgacgtgggctgcaagggaagtgaggcctcg
ctgagcgactgccccgctagggcgtggggacagcacaactgtgaccacgaggaggacgtg
gggctcacctgcactggctatgcagatgaggaagactatcccccctggacctgggacccc
acctcaggagaggacctggccaaggggaccaccgctgcagcggtgcctgcacacactctc
ccctggggcacggctgggagcacaggggccccctccccaacgacgaggcgccttccaagc
acaggtggcgaggatggttatgagccttcctggacatgggctacaccttcaggagaggtc
ccagccaaggggacccccaccgcaggcatacctggaccctctggcaccgctggcaccatc
aggagcccaggccatccctctctagctccaagggtccgtggggatacaggttcactgagg
aaactgtggcccgggcgacggctgcggcccacagcggccaggactgcgccccccaccact
tccccagctccctccgcctcgccggggcccccgggccctgtcctgacctctgactccgcg
ccgcagctcatccccacagcagcttcaacgccggaggtgacctctgaccctcccgccact
ttgccgcccagcccagacccggcctcctggatgaactctcaccgcaccttgacaacccct
ggccttaccttgtccacccctgatgccaccgtgcttccagcgctgacccctgggctttca
cccactccaccacccaccatgcccaaagaactgacctctgacccctctgcaccggcggtg
gtgacccgcctttcccctacctcagagctgacaccagagtctgacacaaccccagtctgg
gacacatctccataccccaacacaactccagaaccttctagtttcccagacccttccaca
agtcctcaccccactaccatccctcactccaccatgacctctcaccctaccacgacctct
caccccactaccaccctttaccccaccacgacccctcactccaagacctctcagcccacc
acaaccccttatcccaccatgacctctcaccccacnnnnnnnnnnnnnngtgctcaacct
atcacaaccccttacccaaccacaacccctcaccccaccacgacccctcaacccaccaca
acccctcctcccatcaccagtgctcaacccatcacaacaccttaccctgccacgaccctt
cacctcaccaccactgcttaccccaccatgactcctcaccccacctcaacccctacggtc
actgccaggtcccttctaacttccttgggaacagaacttccctttccctcttcagcaccc
acagtcaagcccagcccacacccccggttgaccttcacgggggcccctcacccctccacg
tcccagatgtggagcctagagccctgtccagcaacagagtccagcccctgcaggccctct
ccagcccccagcatagacacaccatcccctgagaacttcaaaccacccacaagccagagc
cccaaagtaacctctccacccacccagactccacactcagcctctgaccccactgtgacc
cctgacctccacctgtcccctacggcccccaccttggatcaacctccccctgaccgcctc
agcctagggccaactcctggtcagagcccaggcccccttggcccatgtgaagccccagtg
ccacctgtaagggtcatggcttgtgacccgcctgccctggtagagctggtggccgctgtg
agggatgtgggtagccagctacagaggctgacacaggctctggagcgggaccagcgggag
cgccacgccctgggactggggttgacccagctggtggaggctgcccagggtctgggacag
ctgggtgaggttgtaaagagactggcagaggtggcctggccccccagcacacctgcacca
accactactaccccagaggaggaagagaggcctctgcggggagatgtgtga
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