Neophocaena asiaeorientalis asiaeorientalis (Yangtze finless porpoise): 112406647
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Entry
112406647 CDS
T08872
Symbol
HDAC4
Name
(RefSeq) histone deacetylase 4 isoform X1
KO
K11406
histone deacetylase 4/5 [EC:
3.5.1.98
]
Organism
nasi
Neophocaena asiaeorientalis asiaeorientalis (Yangtze finless porpoise)
Pathway
nasi04371
Apelin signaling pathway
nasi04613
Neutrophil extracellular trap formation
nasi05034
Alcoholism
nasi05203
Viral carcinogenesis
nasi05206
MicroRNAs in cancer
Brite
KEGG Orthology (KO) [BR:
nasi00001
]
09130 Environmental Information Processing
09132 Signal transduction
04371 Apelin signaling pathway
112406647 (HDAC4)
09150 Organismal Systems
09151 Immune system
04613 Neutrophil extracellular trap formation
112406647 (HDAC4)
09160 Human Diseases
09161 Cancer: overview
05206 MicroRNAs in cancer
112406647 (HDAC4)
05203 Viral carcinogenesis
112406647 (HDAC4)
09165 Substance dependence
05034 Alcoholism
112406647 (HDAC4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
nasi03036
]
112406647 (HDAC4)
Enzymes [BR:
nasi01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.98 histone deacetylase
112406647 (HDAC4)
Chromosome and associated proteins [BR:
nasi03036
]
Eukaryotic type
Histone modification proteins
HDACs (histone deacetylases)
Class II HDACs
112406647 (HDAC4)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Hist_deacetyl
HDAC4_Gln
Oxidored_nitro
Motif
Other DBs
NCBI-GeneID:
112406647
NCBI-ProteinID:
XP_024611396
UniProt:
A0A341C9B8
LinkDB
All DBs
Position
Unknown
AA seq
1071 aa
AA seq
DB search
MSSQSHPDGLSGRDQPVELLNPARVNHMPGSVDVASALPLPVAPPAVPMDLRLDHQFPLP
ATEPGIREQQLQQELLALKQKQQLQRQILIAEFQRQHEQLSRQHEAQLHEHIKQQQELLA
VKHQQELLEHQRKLERHRQEQELAKQQREQKLQQLKHKEKGKESAVASTEVKMKLQEFVL
NKKKALAHRNLNHCMSSDPRYWYGKTQHSSLDQSSPPQSGASVSYSHPVLGMYDAKDDFP
LRKTASEPNLKLRSRLKQKVAERRSSPLLRRKDGPVVTALKKRPLDVTDSACSSAPGSAP
SSPNNSSGNASAENGIAPAVPSIPTETGLAHRLVTREGSVGPLPLYTSPSLPNITLGLPA
TGPSAGAASQQEAERLALPALQQRISLFPGTHLTPYLGTAPLERDSGATPSSLLQHVVLL
EQPPAQTPLVTDRYLAGLGALPLHAQPLVGAERVSPSVHKLRQHRPLGRTQSAPLPQSAQ
ALQHLVVQQQHQQFLEKHKQPLQQPQLHLGKIIPKASEPARQPESHPEETEEELREHQAL
LEEPFLDRPSGPKEAHTLAGVQVKQEPVESDEDDVAPGQRQPTEQELLFRQQALLLEQQR
VHQLRSYQASMEAAGIPVSFGGHRPLSRAQSSPASATFPMSVQEPPTKPRFTTGLVYDTL
MLKHQCTCGNTNSHPEHAGRIQSIWSRLQETGLRGRCECIRGRKATLEELQTVHSEAHAL
LYGTNPLNRQKLDSKKLLGSLTSVFVRLPCGGVGVDSDTIWNEVHSSGAARLAVGCVVEL
VFKVATGELKNGFAVVRPPGHHAEESTPMGFCYFNSVAVAAKLLQQRLSVTKTLVVDWDV
HHGNGTQQAFYSDPSVLYISLHRYDDGNFFPGSGAPDEVGTGPGVGFNVNMAFTGGLDPP
MGDAEYLAAFRTVVMPIANEFAPDVVLVSSGFDAVEGHPTPLGGYNLSAKCFGYLTKQLM
GLAGGRIVLALEGGHDLTAICDASEACVSALLGNELDPLPEKVLQQRPNANAVRSMEKVI
EIHSQYWRSLQRLASTAGYSLVEAQKCENEEAETVTAMASLSVGVKAPEKR
NT seq
3216 nt
NT seq
+upstream
nt +downstream
nt
atgagctcccaaagccatccagatggactttctggccgagaccagccggtggagctgctc
aaccctgcccgcgtgaaccacatgccaggctcggtggatgtggcctcggcgctgcctttg
ccggtggctcccccggcggtgcccatggacctgcgcctggaccaccagtttccgctgccc
gcgacggagcccggcatccgggagcagcagctgcagcaggagctcctggccctcaagcag
aagcagcagctccagaggcagatcctcatcgccgagttccagaggcagcacgagcagctg
tcccggcagcacgaagcccagctccacgagcacatcaaacaacagcaggagctgctggcc
gtgaagcaccagcaggagctgctggagcatcagcggaagctggagagacaccgccaagag
caggagctggcgaagcagcagcgggagcagaaactgcagcagctcaagcacaaggagaaa
ggcaaagagagtgctgtggccagcacagaagtgaagatgaagctacaggagtttgtcctc
aataaaaagaaggcgctggcccaccggaacctgaaccactgcatgtccagtgaccctcgc
tactggtatgggaagacgcagcacagctccctggaccagagctccccgccccagagcggg
gcgtcggtctcctacagccacccggtcctgggcatgtacgacgccaaagatgactttcct
ctcagaaagacagcatctgaacccaatctgaaattacgctccaggctaaagcagaaagtg
gctgaaagacggagcagccccctgttacgcaggaaagatgggccagtggtcacggctctg
aaaaagcgtcctttggatgtcacagactcggcctgcagcagcgccccgggctccgcaccc
agctcacccaacaacagctctgggaatgccagcgcggagaatgggatcgcgcctgctgtc
cccagcatcccgaccgagaccggcctggcacacagactcgtgacgcgagaaggctcggtg
ggcccgctgcccctgtacacgtcaccgtccctgcccaacatcacgctgggacttcccgcc
accggcccctccgcgggggcggccagccagcaggaggccgagagactggccctcccggcc
ctccagcaacgcatctccctcttccccggcacccacctcaccccctacctgggcaccgca
cccctggagcgcgactcgggggcgactcccagctcccttctgcagcacgtggtcctcctg
gagcagccgcccgcgcagacgcccctcgtcacagaccgctatcttgcaggcctgggagcg
ctgcccctgcacgcgcagcccctggtgggggcggagcgcgtgtccccgtcggtgcacaag
ctgcggcagcaccgcccgctgggccgcacgcagtcggcgccgctgccccagagcgcgcag
gcgctgcagcacctggtggtccagcagcagcatcagcagttcctggagaagcacaagcag
cccctgcagcagccgcagctgcacctcggcaagatcatccccaaagcgagcgagccggcc
cggcagcccgagagccaccccgaggagactgaggaggagctgcgtgagcatcaggccctc
ctggaggagccgttcctggaccggccctcagggccgaaggaggcgcacacgctggccggg
gtgcaggtgaagcaggagcccgtagagagcgatgaggacgacgtggcaccgggccagcgg
cagcctaccgagcaggagctgctgttcagacagcaagccctcctcctggagcagcaacgg
gtccaccagctgaggagctaccaggcgtcaatggaggcagccggcatccccgtgtccttc
ggcggccaccggcctctgtcccgagcgcagtcctcccccgcgtccgccaccttccccatg
tctgtgcaggagcccccgaccaagccgcggttcaccacaggcctcgtgtacgacacgctg
atgctgaagcaccagtgcacctgtgggaacaccaacagccacccagagcacgccgggcgc
atccagagcatctggtcccggctgcaggagaccggccttcgaggcagatgtgagtgcatc
cgcggacgcaaggccaccctggaggagctgcagacggtgcactcggaggcgcacgccctg
ctctacggcacgaaccctctcaacaggcagaaactggacagtaagaaactcctaggctcg
ctaacatcggtgtttgtcaggctgccctgcggtggtgtcggggtagacagtgacaccata
tggaacgaggtccactcgtcaggggcagcccgcctggccgtgggctgcgtggtggagctg
gtcttcaaggtggccacaggggaactgaagaatggctttgccgtggtccgccccccagga
caccatgcggaggagagcacgcccatggggttctgctacttcaattccgtggctgtcgca
gccaagcttctccagcagaggttgagtgtgaccaagaccctcgtggtggactgggacgtg
caccatgggaacgggacccagcaggccttctacagtgaccccagcgtgctgtacatctcg
ctgcaccgctacgacgatgggaacttcttcccaggcagcggggcacctgacgaggtgggc
acggggcccggcgtgggcttcaacgtcaacatggctttcaccggcggccttgaccccccc
atgggagacgcagagtacttggcggccttcagaactgtggtcatgccgatcgccaacgag
tttgccccagacgtggtgctggtgtcatcgggcttcgacgccgtagagggccaccccacg
cccctcggaggctacaacctctccgccaaatgtttcgggtacctgacgaagcagctgatg
ggcttggctggcggccggatcgttctggcgctggaggggggccacgacctcacagccatt
tgcgacgcctcggaagcctgcgtctctgctttgctgggaaacgagcttgatcctctccca
gaaaaggttttacagcagagacccaatgcgaacgctgtccggtcgatggagaaggtcatt
gaaatccacagccagtactggcgctccctgcagaggctcgcctccaccgccggctactct
ctggttgaggcccagaagtgcgagaacgaagaggctgagactgttactgccatggcctca
ctgtctgtgggcgtgaaggcccccgagaagaggtga
DBGET
integrated database retrieval system
