Neophocaena asiaeorientalis asiaeorientalis (Yangtze finless porpoise): 112406776
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Entry
112406776 CDS
T08872
Symbol
DROSHA
Name
(RefSeq) ribonuclease 3 isoform X1
KO
K03685
ribonuclease III [EC:
3.1.26.3
]
Organism
nasi
Neophocaena asiaeorientalis asiaeorientalis (Yangtze finless porpoise)
Pathway
nasi03008
Ribosome biogenesis in eukaryotes
nasi05205
Proteoglycans in cancer
Brite
KEGG Orthology (KO) [BR:
nasi00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
112406776 (DROSHA)
09160 Human Diseases
09161 Cancer: overview
05205 Proteoglycans in cancer
112406776 (DROSHA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
nasi03019
]
112406776 (DROSHA)
03009 Ribosome biogenesis [BR:
nasi03009
]
112406776 (DROSHA)
03036 Chromosome and associated proteins [BR:
nasi03036
]
112406776 (DROSHA)
Enzymes [BR:
nasi01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.3 ribonuclease III
112406776 (DROSHA)
Messenger RNA biogenesis [BR:
nasi03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
112406776 (DROSHA)
Ribosome biogenesis [BR:
nasi03009
]
Eukaryotic type
90S particles
RNase
112406776 (DROSHA)
Prokaryotic type
rRNA processing factors
112406776 (DROSHA)
Chromosome and associated proteins [BR:
nasi03036
]
Eukaryotic type
Gene silencing
microRNA pathway
Microprocessor complex
112406776 (DROSHA)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ribonuclease_3
Ribonucleas_3_3
dsrm
RM44_endonuclase
YcaO
Motif
Other DBs
NCBI-GeneID:
112406776
NCBI-ProteinID:
XP_024611527
UniProt:
A0A341CAT8
LinkDB
All DBs
Position
Unknown
AA seq
1373 aa
AA seq
DB search
MQGSTCHRMSFHPGRGCPRGRGGHGSRPSAPAFRPQNLRLLHPQQPPVQYQYEPPSAPST
TFSNAPAPNFLPPRPDFVPFPPPMPPSAQGPLPPCPIRPPFPSHQMRPPFPVPPCFPPMP
PPMPCPNNPPVPGAPPGQGTFPFMMPPPSMPHPPPPPVVPQQVNYQYPPGYSHHSFPPPN
FNSFQNNLSSFSPSANNSSSPHFRHLPPYPLPKAPSERRSPERLKHYDDHRRRDHSHGRG
ERHRSLDRRERGRSPDRRRQDSRYRSDYDRGRTPSRHRSYERSRERERERHRHRDSRRSP
SLERSYKKEYKRSGRSYGLPGASEPAGCTPELSGEIIKNTDSWAPPPETLNHRSPSREKK
RARWEEEKDRWGDNQSSGKEKNGSSVKEREPEESLPDRNEEDDDELLKPVWIRCTHSESY
YSSDPMDQVGDSTVVGTSRLRDLYDKFEEELGSRQEKAKAARPPWEPPKTKLDEDLESSS
ESECESDEDSTCSSSSDSEVFDVIAEIKRKKAHPDRLHDELWYNDPGQMNDGPLCKCSAK
ARRTGIRHSIYPGEEAIKPCRPMTNNAGRLFHYRITVSPPTNFLTDRPTVIEYDDHEYIF
EGFSMFAHAPLTNIPLCKVIRFNIDYTIHFIEEMMPENFCVKGLELFSLFLFRDILELYD
WNLKGPLFEDSPPCCPRFHFMPRFVRFLPDGGKEVLSMHQILLYLLRCSKALVPEEEIAN
MLQWEELEWQKYAEECKGMIVTNPGTKPSSVRIDQLDREQFNPDVITFPIIVHFGIRPAQ
LSYAGDPQYQKLWKSYVKLRHLLANSPKVKQTDKQKLAQREEALQKIRQKNTMRREVTVE
LSSQGFWKTGIRSDVCQHAMMLPVLTHHIRYHQCLMHLDKLIGYTFQDRCLLQLAMTHPS
HHLNFGMNPDHARNSLSNCGIRQPKYGDRKVHHMHMRKKGINTLINIMSRLGQDDPTPSR
INHNERLEFLGDAVVEFLTSVHLYYLFPSLEEGGLATYRTAIVQNQHLAMLAKKLELDRF
MLYAHGPDLCRESDLRHAMANCFEALIGAVYLEGSLEEAKQLFGRLLFNDPDLREVWLNY
PLHPLQLQEPNTDRQLIETSPVLQKLTEFEDAIGVIFTHVRLLARAFTLRTVGFNHLTLG
HNQRMEFLGDSIMQLVATEYLFIHFPDHHEGHLTLLRSSLVNNRTQAKVAEELGMQEYAI
TNDKTKRPVALRTKTLADLLESFIAALYIDKDLEYVHTFMNVCFFPRLKEFILNQDWNDP
KSQLQQCCLTLRTEGKEPDIPLYKTLQTVGPSHARTYTVAVYFKGERIGCGKGPSIQQAE
MGAAMDALEKYNFPQMAHQKRFIERKYRQELKEMRWEREHQEKEPDETEDIKK
NT seq
4122 nt
NT seq
+upstream
nt +downstream
nt
atgcaaggcagtacctgtcatagaatgtcattccatccaggacgagggtgtccccgaggg
cgaggaggacatggatccagaccctcagcaccagccttcaggccccaaaatctgagactg
cttcaccctcagcagcctcctgtgcaataccaatacgaacctccgagcgccccttccacc
acgttctccaacgctccagctcccaatttcctgcctccacgaccagacttcgtgcccttc
cctccacccatgcctccatcagcacaaggcccccttcccccctgcccgatccggcccccc
ttccccagccaccagatgaggcccccctttcccgtgcctccctgttttcctcccatgccg
cctccgatgccctgtcccaataaccccccagtccctggagcacctcctggacagggcacc
ttccccttcatgatgccccctccatccatgccccaccccccgcctcctcccgtagtgcct
cagcaggtcaattaccagtaccctccgggatactcgcaccacagtttcccacctcccaat
tttaatagcttccagaacaacctcagttccttctcacccagtgctaataatagcagtagc
cctcattttaggcacctccctccatacccactcccaaaggctcccagtgagaggaggtcc
ccagaaaggctcaagcactatgatgatcacagacgccgggatcacagtcacgggaggggc
gagaggcatcgttccttggatcggcgggagcgaggccgaagtcctgacaggagaaggcag
gacagccgctacagatccgattacgaccgggggaggacaccgtcccgccataggagctat
gagcggagcagagagcgggaacgggagagacacaggcaccgggacagccgaagatcaccg
tctctggaaaggtcctacaaaaaagagtataagagatctggaaggagttatggtttgccg
ggtgcttctgaacctgctggatgcacaccagaattatctggggagattattaaaaataca
gattcttgggccccacccccggagactttgaatcatcgctccccaagtagggagaagaag
agagctcgttgggaggaagaaaaagacagatggggtgacaaccagagctccggcaaagag
aagaatggtagctcagtcaaagaaagagagccggaggagtcgctgcccgacagaaacgag
gaggacgacgacgagctccttaagcctgtgtggatccgatgcacccactcagaaagctac
tactccagtgaccccatggatcaggtgggagactctacggtagttggaacaagtagactc
cgcgacttatatgacaaatttgaggaagagttggggagcaggcaagagaaggccaaagct
gctagacccccatgggagcctcccaagacgaagctagatgaagatttagagagttccagt
gaatccgaatgtgagtccgatgaggacagcacctgttctagcagctcagactctgaagtt
ttcgacgtcattgcagaaatcaaacgcaaaaaggcccatcctgaccgacttcacgatgaa
ctttggtacaatgacccaggccagatgaatgatggcccactctgcaaatgcagcgcaaaa
gcgagacgcacgggaatcaggcacagcatttatcccggagaagaggccatcaagccctgt
cgtcctatgaccaacaatgctggcagacttttccactatcgaattacagtctcacctcct
acaaactttttaactgacaggccaactgttatcgaatatgatgatcatgagtatatcttt
gaaggattttctatgtttgcacacgcccccctgaccaatattccactgtgtaaagtaatt
agattcaacatagactacacgattcatttcattgaggagatgatgcctgagaatttttgt
gtgaaaggacttgaactcttttcattatttctattcagagatattttggaattgtatgac
tggaaccttaaaggtcctttgtttgaagacagtcctccctgctgcccaagatttcatttc
atgccacgttttgtaagatttcttccagacggaggaaaggaagtactgtccatgcaccag
atcctcctttacttattacggtgtagcaaagccctggttcccgaagaggagattgccaat
atgcttcagtgggaagaactcgagtggcagaaatatgcggaagaatgcaaaggcatgatt
gtcaccaaccctgggacgaaaccaagctctgtccgcatcgatcaactggatcgtgaacag
ttcaaccccgatgtgattacttttcctattattgtccactttgggatacgccctgcacag
ttgagttatgctggagacccacagtaccagaaactgtggaagagttatgtaaaacttcgc
cacctcctagcaaatagccctaaagtcaaacaaactgacaagcagaagctggcacagagg
gaggaagcactccagaaaatacgacagaagaacaccatgaggcgagaagtaacagtggag
ctgagtagccaaggattctggaaaactggcatccgttctgatgtctgtcagcatgcaatg
atgctgcctgttttgacccatcatattcgataccaccagtgcctaatgcatctggacaag
ttgataggatatactttccaagatcgttgtctgttacagctggcaatgacccacccaagt
catcacttaaattttggaatgaatcctgatcatgccaggaattctttgtctaactgtgga
attcggcaacccaaatatggagatagaaaagttcatcacatgcacatgcggaaaaaagga
attaacaccttaataaatattatgtcacgccttggccaagatgacccaactccctcaagg
attaatcataatgaacggttggagttcctgggtgatgctgttgttgaatttctgaccagt
gtccatttgtactatttgtttcctagtctagaagagggaggattagcaacctatcggact
gccatcgttcagaaccagcaccttgccatgctagcaaagaaactggaactggatcgattt
atgctttatgctcatggacctgacctttgtagagaatcagaccttcgacatgccatggct
aattgttttgaagcattaataggagctgtttacttggagggaagcctggaggaagccaaa
cagttatttggacgcttactctttaatgatccggacttgcgcgaagtctggctcaattat
cctctccacccactccagcttcaagagccaaatactgatcgacaacttattgagacttct
ccagttctgcagaaacttactgaatttgaagacgcaattggagtaatttttacccacgtt
cgacttttggcaagagcattcacattgagaactgtgggatttaaccatctgaccctaggc
cacaatcagaggatggaattcctcggtgactccataatgcagctggtagccacggagtac
ttattcattcatttcccagatcatcatgaaggacacttaactctgttgcgaagctctttg
gtgaataacagaactcaagccaaggtagcagaggaattgggcatgcaggaatatgccatc
accaacgacaagaccaagaggcctgtggcccttaggaccaagaccttggccgaccttttg
gaatcatttatcgcagctctgtacattgataaggatttggaatatgttcatactttcatg
aatgtttgtttctttccacgattaaaagagttcattttgaatcaggattggaatgacccc
aaatcccagcttcagcagtgttgcttgacacttaggacagaaggaaaagagccagacatt
cctctgtacaagactctgcagacagtggggccatcccatgctaggacctataccgtggct
gtctacttcaagggagaaagaatcggctgtgggaaaggcccaagtattcagcaagcagaa
atgggagcagcaatggatgcacttgaaaaatataactttccccagatggcccatcagaag
cggttcattgaacggaaatacagacaagagttaaaagaaatgaggtgggaaagagagcat
caagagaaagagccagatgagactgaagacataaagaaataa
DBGET
integrated database retrieval system
