Neophocaena asiaeorientalis asiaeorientalis (Yangtze finless porpoise): 112406955
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Entry
112406955 CDS
T08872
Symbol
SMC3
Name
(RefSeq) structural maintenance of chromosomes protein 3
KO
K06669
structural maintenance of chromosome 3 (chondroitin sulfate proteoglycan 6)
Organism
nasi
Neophocaena asiaeorientalis asiaeorientalis (Yangtze finless porpoise)
Pathway
nasi04110
Cell cycle
nasi04114
Oocyte meiosis
Brite
KEGG Orthology (KO) [BR:
nasi00001
]
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
112406955 (SMC3)
04114 Oocyte meiosis
112406955 (SMC3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
nasi03036
]
112406955 (SMC3)
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
nasi00535
]
112406955 (SMC3)
Chromosome and associated proteins [BR:
nasi03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Cohesin complex
112406955 (SMC3)
Meiosis-specific proteins
Cohesin complex and associated proteins
112406955 (SMC3)
Proteoglycans [BR:
nasi00535
]
Extracellular matrix (ECM) proteoglycans
Basement membrane proteoglycans
112406955 (SMC3)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SMC_N
SMC_hinge
AAA_15
AAA_21
AAA_23
AAA_29
FtsK_SpoIIIE
Motif
Other DBs
NCBI-GeneID:
112406955
NCBI-ProteinID:
XP_024611829
UniProt:
A0A341CB84
LinkDB
All DBs
Position
Unknown
AA seq
1217 aa
AA seq
DB search
MYIKQVIIQGFRSYRDQTIVDPFSSKHNVIVGRNGSGKSNFFYAIQFVLSDEFSHLRPEQ
RLALLHEGTGPRVISAFVEIIFDNSDNRLPIDKEEVSLRRVIGAKKDQYFLDKKMVTKND
VMNLLESAGFSRSNPYYIVKQGKINQMATAPDSQRLKLLREVAGTRVYDERKEESISLMK
ETEGKREKINELLKYIEERLHTLEEEKEELAQYQKWDKMRRALEYTIYNQELNETRAKLD
ELSAKRETSGEKSRQLRDAQQDARDKMEDIERQVRELKTKISAMKEEKEQLSAERQEQIK
QRTKLELKAKDLQDELAGNSEQRKRLLKERQKLLEKIEEKQKELAETEPKFNSVKEKEER
GIARLAQATQERTDLYAKQGRGSQFTSKEERDKWIKKELKSLDQAINDKKRQIAAIHKDL
EDTEANKEKNLEQYNKLDQDLNEVKARVEELDRKYYEVKNKKDELQSERNYLWREENAEQ
QALAAKREDLEKKQQLLRAATGKAILNGIDSINKVLDHFRRKGINQHVQNGYHGIVMNNF
ECEPAFYTCVEVTAGNRLFYHIVDSDEVSTKILMEFNKMNLPGEVTFLPLNKLDVRDTAY
PETNDAIPMISKLRYNPRFDKAFKHVFGKTLICRSMEVSTQLARAFTMDCITLEGDQVSH
RGALTGGYYDTRKSRLELQKDVRKAEEELGELEAKLNENLRRNIERINNEIDQLMNQMQQ
IETQQRKFKASRDSILSEMKMLKEKRQQSEKTFMPKQRSLQSLEASLHAMESTRESLKAE
LGTDLLSQLSLEDQKRVDALNDEIRQLQQENRQLLNERIKLEGIITRVETYLNENLRKRL
DQVEQELNELRETEGGTVLTATTSELEAINKRVKDTMARSEDLDNSIDKTEAGIKELQKS
MERWKNMEKEHMDAINHDTKELEKMTNRQGMLLKKKEECMKKIRELGSLPQEAFEKYQTL
SLKQLFRKLEQCNTELKKYSHVNKKALDQFVNFSEQKEKLIKRQEELDRGYKSIMELMNV
LELRKYEAIQLTFKQVSKNFSEVFQKLVPGGKATLVMKKGDVEGSQSQDEGEGSGESERG
SGSQSSVPSVDQFTGVGIRVSFTGKQGEMREMQQLSGGQKSLVALALIFAIQKCDPAPFY
LFDEIDQALDAQHRKAVSDMIMELAVHAQFITTTFRPELLESADKFYGVKFRNKVSHIDV
ITAEMAKDFVEDDTTHG
NT seq
3654 nt
NT seq
+upstream
nt +downstream
nt
atgtacataaagcaggttattatccagggttttcgaagttatagagatcaaacaattgta
gatcccttcagttcaaaacataatgttattgtgggcagaaatggatctggaaaaagtaac
tttttttatgcaattcagtttgttctcagtgatgagtttagccatcttcgtccggaacag
agattggctttgttacatgagggtacaggacctcgtgttatttctgcttttgtggagatt
atttttgacaattcagacaaccggttgccaatcgacaaagaggaagtttcacttagaaga
gttattggtgccaaaaaggatcagtatttcttagacaagaaaatggtcacgaaaaatgat
gtgatgaatctccttgaaagtgctggtttttctcgaagcaatccttattatattgttaaa
caaggaaagatcaaccagatggcaacagcaccagattctcagagactaaaactattaaga
gaagtagctggtactagagtgtatgatgaacgaaaagaagaaagcatctctttaatgaag
gaaacagagggcaaacgggaaaaaatcaatgagttgttaaaatacattgaagagagatta
cataccttagaggaagaaaaggaagaactagctcagtatcagaagtgggataagatgaga
cgagccctggaatacaccatttacaatcaggaacttaacgagactcgtgctaaacttgat
gagctttctgctaagcgagagactagtggagaaaaatccaggcaattaagagacgcccag
caggatgcaagagataaaatggaggatattgagcgccaagttagagaactgaaaacaaaa
atttcagctatgaaagaagaaaaggagcagctcagtgctgaaagacaagaacaaattaag
cagaggactaagttggagcttaaagccaaggatttacaagatgaattggcaggcaatagt
gaacagaggaaacgcttattaaaagaaaggcagaagctgcttgaaaaaatagaagaaaag
cagaaagaactggcagaaacagaacctaaattcaacagtgtaaaagaaaaagaagagcga
ggaattgctagattggcccaagctacgcaggaaagaacggatctttatgcaaagcagggt
cgaggaagccagtttacatcaaaagaagaaagggataagtggattaaaaaggaactcaag
tctttagatcaggctattaatgacaagaaaagacagattgctgctatacataaggatttg
gaggacactgaggcaaataaagagaaaaatctggagcagtataataaactggatcaggat
cttaatgaagtcaaagctcgagttgaagaactggacagaaaatactatgaagtaaaaaat
aagaaagatgaattacaaagtgaaagaaattacttgtggagagaggagaatgcagaacag
caagcacttgctgctaaaagagaagatcttgaaaagaaacagcaacttcttagagctgca
acaggaaaggccattttaaatggaatagatagtataaacaaagtgctagaccactttcgt
cgaaagggaataaaccagcatgttcaaaatggctatcatggtattgtgatgaataacttt
gaatgtgagcctgctttttacacgtgcgtggaagtcactgctggaaataggttgttttat
cacattgttgattcagatgaagtcagcacgaagattttgatggagtttaataaaatgaac
ctacctggagaggttacttttctgcctcttaacaaattagatgtaagggatactgcctat
cctgaaaccaatgatgctattcctatgataagtaaattgaggtacaatcccagatttgac
aaagctttcaaacatgtgtttggaaaaacacttatttgtcgtagtatggaagtttcaacc
cagttggcccgtgctttcactatggactgcattaccctggaaggtgaccaagttagtcat
cggggtgctttaactggaggctattatgatacaaggaagtctagacttgaattacaaaaa
gatgttagaaaagcagaagaagaactaggtgagcttgaagcaaagctcaatgaaaatctg
cgcagaaatattgaaaggattaataatgaaattgatcagctgatgaaccaaatgcagcag
atagagactcagcaaaggaaatttaaagcatctcgagatagcatattatcagaaatgaag
atgttaaaagagaagaggcagcagtcagagaaaacctttatgcccaagcaacgtagctta
caaagtttggaggcaagtttgcatgctatggagtccaccagagaatcgctgaaagcagaa
cttggaactgatttgctttctcaacttagtctggaagatcagaagagagtagatgcactg
aatgatgaaattcgtcaacttcagcaggaaaacagacagttgctaaatgaaagaattaag
ttagaaggtattattactcgagtagagacttacctcaacgagaatttaagaaagcgcttg
gaccaagtagaacaggaactcaatgaactgagagagacagaagggggtactgttctcact
gctacaacctcagaacttgaagccatcaataaaagagtaaaagataccatggcacgatca
gaagatttggacaattccattgataaaacagaagctggaattaaggagttgcagaaaagt
atggagcgctggaaaaatatggaaaaagaacacatggatgctataaatcatgacactaaa
gaactagaaaagatgacaaatcgacaaggcatgctactgaagaagaaagaagagtgtatg
aagaaaattcgagaacttggatcacttccccaggaagcatttgaaaaataccaaacgctg
agcctcaaacagttgtttcgaaaacttgaacaatgcaacacagaattgaagaagtacagc
catgttaacaaaaaagctttagatcagtttgtaaatttctctgagcagaaagaaaagtta
ataaagcggcaagaagagttggatagggggtacaaatcaatcatggaactgatgaatgta
cttgaacttcgaaaatatgaagctattcagttgactttcaaacaggtatccaaaaacttc
agtgaagtattccaaaagttggtacctggtggcaaagctactttggtgatgaagaaagga
gatgtggaaggcagtcagtctcaggatgaaggagaagggagtggtgaaagtgagaggggc
tctgggtcacaaagcagtgttccatcagttgaccagttcactggagttggaattagggtg
tcatttacaggaaaacaaggtgaaatgagagaaatgcaacagctttcaggtggacagaaa
tccttggtagctcttgctctgatttttgccattcagaaatgtgacccagctcctttttac
ttgtttgatgagattgaccaggctctggatgctcagcacagaaaggctgtgtcagatatg
attatggaacttgctgtacatgctcagtttattacaactacttttaggcctgaattgctt
gagtcagctgacaaattctatggtgtaaagttcagaaataaggttagtcatattgatgtg
atcacagcagagatggccaaagactttgtagaagatgataccactcatggttaa
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