Neophocaena asiaeorientalis asiaeorientalis (Yangtze finless porpoise): 112408288
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Entry
112408288 CDS
T08872
Symbol
NPC1
Name
(RefSeq) NPC intracellular cholesterol transporter 1
KO
K12385
Niemann-Pick C1 protein
Organism
nasi
Neophocaena asiaeorientalis asiaeorientalis (Yangtze finless porpoise)
Pathway
nasi03265
Virion - Ebolavirus, Lyssavirus and Morbillivirus
nasi04142
Lysosome
nasi04979
Cholesterol metabolism
Brite
KEGG Orthology (KO) [BR:
nasi00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03265 Virion - Ebolavirus, Lyssavirus and Morbillivirus
112408288 (NPC1)
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome
112408288 (NPC1)
09150 Organismal Systems
09154 Digestive system
04979 Cholesterol metabolism
112408288 (NPC1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
nasi02000
]
112408288 (NPC1)
Transporters [BR:
nasi02000
]
Solute carrier family (SLC)
SLC65: NPC-type cholesterol transporter
112408288 (NPC1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
NPC1_MLD
NPC1_N
Sterol-sensing
Patched
MMPL
ACR_tran
Motif
Other DBs
NCBI-GeneID:
112408288
NCBI-ProteinID:
XP_024613632
UniProt:
A0A341CI68
LinkDB
All DBs
Position
Unknown
AA seq
1277 aa
AA seq
DB search
MSACGPVLGLLLLLLCPAQVFSQSCVWYGECGIASGDKRYNCRYSGLPKPLPEDGYDLVQ
ELCPGFFFGNVNLCCDVQQLRTLKDNLQLPLQFLSRCPSCFYNLMNLFCELTCSPRQSQF
LNVTAMEDYVDPVTNQTKTNVKELQYYVGESFANAMYNACRDVEAPSSNEKALGLLCGKE
AEACNATNWIEYMFNKDNGQAPFTITPIFSDLPAHEMEPMNNATKGCDESVDEVTGPCSC
QDCSIVCGPKPQPPAPPVPWKILGLDAMYVIMWSTYMAFLLVFFGAFFAVWCYRKRYFVS
EYTPIDGNIAFSVNASDKGGPSCCDSLGAAFEARLQRLFAQWGLFCVRHPGCIIFFSMAF
IAACSSGLVFVQVTTDPVDLWSAPGSQARREKEYFDTHFGPFFRTEQLIIQVPLTQPHMY
HPYPSGADVPFGPPLAIDILHQVLDLQTAIENITASYNNETVTLQDVCLAPLSPYNKHCT
IMSVLNYFQNSHSVLDHKVGDDFFVYADYHTHFLYCVRAPASLNDTSLLHDPCLGTFGGP
VFPWLVLGGYDDENYNNATALVITFPVNNYCNDTEKLQKAQAWEGEFINFVKNYKNPNLT
ISFKAERSIEDEINRESNSDIFTVLISYSIMFLYISIALGHIKSCSRFLVDSKISLGIAG
ILIVLSSVACSLGIFSYIGIPFTLIVIEVIPFLVLAVGVDNIFILVQTFQRDERLQGETL
DQQVGRVLGEVAPSIFLSSFSETVAFFLGGLSVMPAVHTFSLFAGMAVLIDFLLQISCFV
SLLGLDVKRQEKNRLDILCCVGGAADRAGIQASESCLFHFFRDAYAPLLLKDWMRPIVVA
VFVGVLSFSIAVLNKVEIGLDQSLSMPDDSYVTDYFQSLNRYLHAGPPVYFVMEGGHDYT
SLKGQNMVCGGLGCNNDSLVQQIFNAAQLDNYTRIGFAPSSWIDDYFDWVKPQSSCCRVY
NSTDRFCNASVVDPACVHCRPLTPEGKQRPQGADFMRFLPMFLSDNPNPKCGKGGHAAYS
AAVNILGNGTGVGATYFMTYHTVLKTSADFIDAMEKARLIASNITRTMGLEGSDHRVFPY
SVFYVFYEQYLTMIDDTIFNLGVSLGAIFLVTVVLLGCELWSAVIMCITIAMILVNMFGV
MWLWGISLNAVSLVNLVMSCGISVEFCSHITRAFTVSTKGSRMERAEEALSHMGSSVFSG
ITLTKFGGIMVLAFAKSQIFQRFYFRMYFAMVLLGATHGLIFLPVLLSYIGPPINKAKSL
AAQERYRGTERERLLNF
NT seq
3834 nt
NT seq
+upstream
nt +downstream
nt
atgagtgcgtgcggcccggtcctcggcctcctcctgctgctgctctgccccgcgcaggta
ttttcacagtcctgtgtttggtatggagagtgtggaattgcatctggagataagaggtac
aactgcagatattctgggctaccaaagccgttgccagaggatggctatgacctggtgcag
gaactctgtccagggttcttcttcggcaacgtcaatctttgctgtgatgttcagcagctt
cggacattgaaagacaacctgcagctgcccctgcagtttctgtccagatgtccatcctgt
ttttataacctaatgaacctgttttgtgagctgacatgtagccctcgacaaagtcagttt
ctgaacgttacagcaatggaagattatgttgatcctgttacaaaccagacaaaaacaaac
gtaaaagaattacaatactatgttggagagagttttgccaatgccatgtacaatgcctgc
agggacgtggaggccccctcgagtaacgagaaagccctggggctgctgtgcgggaaggag
gccgaagcctgcaacgccaccaactggattgagtacatgttcaacaaggacaacggccag
gcgcctttcaccatcacgcccatcttttcagatcttccagcccatgagatggagcccatg
aacaatgccaccaagggctgtgacgagtccgtggatgaggtcacggggccctgcagctgc
caggactgctcgatcgtctgtgggcccaagccccagccccccgcccctcctgttccctgg
aaaatcctgggtctggacgccatgtacgtcatcatgtggagcacctacatggcgttcctg
ctcgtgttttttggtgcattctttgccgtgtggtgctacagaaaacggtattttgtctcc
gagtacacccccattgatggcaatattgctttctctgtaaatgccagtgacaaagggggg
ccgtcctgctgtgactctctgggtgccgccttcgaagcccgtctacagcggctcttcgca
cagtggggcttgttctgcgtccgacaccccggctgcatcattttcttctccatggccttc
attgccgcctgttcttcgggcctggtgtttgtgcaggtcacgacagacccggtggacctc
tggtctgcgcccggcagccaggcgcgccgggagaaggagtacttcgacacacacttcgga
cctttcttccgcaccgagcagctcatcatccaagtccccctcacccagccacacatgtac
catccctacccctctggagccgacgtgccctttgggcctccacttgccatagacatcttg
caccaggttcttgacttacaaacagccatcgagaacattactgcatcttacaacaatgag
actgtgacactccaggacgtctgcttggcccccctctcaccatataacaagcactgcacc
atcatgagcgtgttaaattacttccagaacagccattccgtgctggaccacaaagtagga
gacgacttctttgtgtacgcggattaccacacacacttcctgtactgcgttcgggctccc
gcctccctgaatgacaccagtttgctccacgatccttgcctggggacctttggtggacca
gtgttcccgtggcttgtgttaggaggctatgatgatgaaaactacaataacgccacagcc
cttgtgattacctttcctgtcaataattactgtaacgatacagagaagctccagaaggcc
caggcctgggaaggagagtttattaattttgtgaaaaactacaagaatccaaatctgacc
atttcttttaaggctgaacgaagtattgaagatgaaataaaccgtgaaagtaacagtgat
atcttcactgttctaatcagctatagcatcatgtttttatatatttccatagccttgggg
catatcaaaagctgtagcaggtttctggtggattcgaaaatctccctgggcatcgcgggc
atcctgattgtgctgagctcggtggcgtgctccttgggcatcttcagctacattgggatc
cccttcaccctcattgtgatagaagtcatcccgttcctggtgctggctgtgggagtggac
aacatcttcattctggtccagaccttccagagagatgaacgtctccaaggggagacgctg
gaccagcaggtgggccgggtcctgggagaagtggctccaagtattttcctgtcgtccttt
tcagagacggtagcatttttcttaggaggcctgtccgtgatgccagctgtgcacaccttc
tctctctttgcggggatggcggtcctcattgacttcctccttcagattagctgttttgtg
agtctcttggggttagacgttaagcgtcaagagaagaaccggctggacatcctctgctgt
gtcgggggcgcggcagacagagcaggcatccaggcctcggagagctgcttattccacttc
ttcagagacgcctatgctccacttctgcttaaggactggatgcggcccattgtggtagcg
gtatttgtgggtgttctgtcattcagtatcgcagtcctgaacaaagtagaaattggcttg
gatcagtctctgtcaatgccagatgactcctacgtgacggattatttccagtccctcaat
cgctacctgcacgcgggcccgcccgtgtactttgtcatggagggagggcacgactacact
tctctgaaagggcagaacatggtgtgcgggggcctgggctgcaataacgactcgctggtg
cagcagatcttcaacgccgcccagctggacaactatacccggataggctttgctccctcg
tcctggattgacgattattttgactgggtcaagccacagtcgtcttgctgtagagtctac
aacagcacggatcggttctgcaatgcatcggtggttgaccctgcctgcgtccactgccgg
cctctgactccagagggcaagcagaggcctcagggcgcagacttcatgaggttcctgccc
atgttcctctccgataacccgaaccccaagtgtggcaaagggggacacgccgcttacagc
gcggcagttaacatcctcggcaacggcacgggcgtcggagccacgtacttcatgacctac
cacacggtgctcaagacctctgctgacttcatcgacgccatggaaaaggcccgcctcatc
gccagcaacatcaccagaaccatgggcctggaaggaagtgatcaccgtgtgttcccatac
agtgtgttctacgtcttctacgaacagtacctgaccatgattgacgacactatctttaac
ctcggtgtgtccctgggtgccatctttttggtgaccgtggttctcctgggctgtgagctg
tggtcggcagtgatcatgtgcatcaccattgctatgatcttggtcaacatgttcggtgtc
atgtggctctggggcatcagtttgaatgcggtttctttggtcaacttggttatgagctgt
ggcatctccgtggagttctgcagccatatcacgagagcgttcacggtgagcacgaaggga
agccgcatggaacgggcagaagaggcgctctcccacatgggcagctctgtattcagcgga
atcacactaacgaaatttggaggcattatggttttggccttcgccaaatctcaaattttc
cagagattttacttcaggatgtatttcgctatggtcttactgggagccactcatggatta
atattcctccctgtcttgctcagttacataggaccaccgataaataaagccaaaagtttg
gcagctcaagagcgatacagaggtacagagcgagagcggctcctcaatttctag
DBGET
integrated database retrieval system
