Neophocaena asiaeorientalis asiaeorientalis (Yangtze finless porpoise): 112408631
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Entry
112408631 CDS
T08872
Symbol
COL6A2
Name
(RefSeq) collagen alpha-2(VI) chain isoform X1
KO
K06238
collagen type VI alpha
Organism
nasi
Neophocaena asiaeorientalis asiaeorientalis (Yangtze finless porpoise)
Pathway
nasi04151
PI3K-Akt signaling pathway
nasi04510
Focal adhesion
nasi04512
ECM-receptor interaction
nasi04518
Integrin signaling
nasi04820
Cytoskeleton in muscle cells
nasi04974
Protein digestion and absorption
nasi05165
Human papillomavirus infection
Brite
KEGG Orthology (KO) [BR:
nasi00001
]
09130 Environmental Information Processing
09132 Signal transduction
04151 PI3K-Akt signaling pathway
112408631 (COL6A2)
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
112408631 (COL6A2)
04518 Integrin signaling
112408631 (COL6A2)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
112408631 (COL6A2)
09142 Cell motility
04820 Cytoskeleton in muscle cells
112408631 (COL6A2)
09150 Organismal Systems
09154 Digestive system
04974 Protein digestion and absorption
112408631 (COL6A2)
09160 Human Diseases
09172 Infectious disease: viral
05165 Human papillomavirus infection
112408631 (COL6A2)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
nasi04147
]
112408631 (COL6A2)
00536 Glycosaminoglycan binding proteins [BR:
nasi00536
]
112408631 (COL6A2)
Exosome [BR:
nasi04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
112408631 (COL6A2)
Glycosaminoglycan binding proteins [BR:
nasi00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
112408631 (COL6A2)
Hyaluronan
Extracellular matrix or blood plasma proteins
112408631 (COL6A2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
VWA
Collagen
VWA_2
Motif
Other DBs
NCBI-GeneID:
112408631
NCBI-ProteinID:
XP_024614106
UniProt:
A0A341CH47
LinkDB
All DBs
Position
Unknown
AA seq
1025 aa
AA seq
DB search
MSGRTGAAKMLPGPCSALLLWGLLGAVHAQQQEVISPSTSERNSCPEKADCPIHVYFVLD
TSESITMQSPTDSLLYHMQQFVLQFISQLQDELYLDQVALSWRYGGLHFSDLVEVFSPPG
SDRASFTKSLQGISSFRRGTFTDCMLANMTKEVRRLMGSVDFAVIITDGHVTGSPCGGIK
LQAERAREEGIRLFAVPPNLKLNEQGLRDIASTPHELYRNNYATMRPDSTEIDEDTINRI
IKVMKHEAYGECYKVSCLEIPGPPGPKGYRGQKGAKGNMGEPGEPGQKGRQGDPGIEGPI
GFPGPKGVPGFKGEKGEFGAEGRKGAPGLVGKNGTDGQKGKLGRIGPPGCKGDAGDRGPD
GYMGEAGSPGEPGDQGSKGDPGRPGRRGPPGDNGAKGSKGYQGNTGAPGSPGLKGAKGGP
GPRGPKGEPGRRGDPGTKGSPGSDGPKGEKGDPGPEGPRGLAGEVGNKGAKGDRGLPGPR
GPQGTVGEPGKQGSRGDPGDAGPRGDSGQPGPKGDPGRPGFSYPGLRGAPGEKGEPGPRG
PEGGRGDFGSKGEPGRKGQKGEPADPGPPGEPGPRGQRGAPGPEGEPGPPGDPGLTECDV
MTYVRETCGCCDCEKRCGALDVVFVIDSSESIGYTNFTLEKNFVINVVNRLGAIAKDPKS
ETGTRVGVVQYSHDGTFEAIQLDDERINSLSSFKEAVKNLEWIAGGTWTPSALKFAYDQL
IKESRRQKTRVFAVVITDGRHDPRDDDLNLRALCNRDVTVTAIGIGDMFHEKHESENLYS
IACDKPQQVRNMTLFSDLVAEKFIDDMEDVLCPDPQIVCPELPCQTELYVAQCTQRPVDI
VFLLDGSERLGEQNFHKARRFVEEVSRRLTLARRDDDPLNARVALLQFGGPREQQVAFPL
TSNLTVIQEALASARYLNSFSHVGVGIVHAINQVVRSTRAGARRHAELDFVFLTDGVTGN
DSLEEAVHSMRKQNVVPTVVAVGSDVDADVLSKISLGDPAAIFREKDYDSLAQPGFFDRF
IRWIC
NT seq
3078 nt
NT seq
+upstream
nt +downstream
nt
atgtcggggcgcacgggcgctgccaagatgctcccaggcccctgctccgccctcctgctc
tggggcctcctgggggccgtccacgctcagcagcaggaggtcatcagccccagcacctcc
gagaggaacagctgcccagagaaggccgactgcccgatccacgtgtacttcgtgctggac
acgtcggagagcatcaccatgcagtcccccaccgacagcctgctctaccacatgcagcag
ttcgtgctgcagttcatcagccagctgcaggacgagctctacctggaccaggtggccctg
agctggcgctacggcggcctgcacttctccgacctggtggaggtgttcagcccgcccggc
agcgaccgggcctccttcaccaagagcctgcagggcatcagctccttccgccgcggcacc
ttcaccgactgcatgctggccaacatgaccaaggaggtccggcggctcatgggcagtgtc
gacttcgcggtgatcatcaccgacggccacgtcacgggcagcccgtgcgggggcatcaag
ctgcaggcggagcgggcccgcgaggagggcatccggctcttcgcggtgccgcccaacctg
aagctgaacgagcagggcctgcgggacatcgccagcacgccgcacgagctctaccggaac
aactacgccaccatgcggcccgactccaccgagatcgacgaggacaccatcaaccgcatc
atcaaggtcatgaaacatgaagcctacggagagtgctacaaggtgagctgtctggagatc
cccgggccccccggccccaagggctaccgcggacagaagggcgccaagggcaacatgggt
gagcccggagagcctggacagaaggggcgacagggagatccaggcatcgaaggccccatc
ggattcccaggacccaagggtgttcctggtttcaaaggagagaagggcgagtttggagcc
gaagggcgaaagggcgcccccggcctggtgggcaagaacgggacggatggacagaagggc
aagttggggcgcatcggacctcctggctgcaagggagacgccggggatcggggcccggat
ggttacatgggggaagccggcagccctggggagccaggagatcaaggctccaagggagac
cctggccgcccgggacgcagagggccccccggggataacggggcaaaaggaagcaagggc
taccaaggcaacaccggagccccaggaagtcccggtctgaaaggagccaagggtgggcct
gggccccgaggccccaaaggcgagcccgggcgcaggggagaccctggaaccaagggcagc
ccaggcagcgatggccccaagggcgagaagggggaccctggccctgaggggccccggggc
ctggctggagaggttggcaacaaaggagccaagggagaccgaggtttacctggacccaga
ggtccccaagggactgttggagagcccgggaagcagggatctcggggagaccctggggat
gctggcccccgcggagactcgggacagcctggccccaagggagacccgggcaggcctggc
ttcagctacccgggactccgaggagcacctggagagaaaggcgagcctggcccccgcggc
cccgaggggggcagaggtgactttgggtccaaaggagaacccgggaggaaaggccagaag
ggcgagcctgcagatcctggtccccctggtgagccaggcccgcgggggcagagaggagca
ccaggacccgagggagagcctggccccccaggagaccccggcctcacggagtgcgacgtc
atgacctacgtgagggagacgtgcgggtgctgtgactgtgagaagcgctgtggcgctctg
gacgtggtgttcgtcatcgacagctccgagagcattggctacaccaacttcaccctggag
aagaacttcgtcatcaacgtggtcaacaggctgggggccatcgccaaggaccccaagtcg
gagacagggacccgcgtgggcgtcgtgcagtacagccacgacggcaccttcgaggccatc
cagctggacgacgagcgcatcaactcactgtccagcttcaaggaggccgtcaagaacctt
gagtggatcgcgggcggcacctggacgccctcagccctcaagttcgcctacgaccagctc
atcaaggagagccggcgccagaagacccgcgtgttcgcggtggtcatcacggacggccgc
cacgacccccgcgacgacgacctcaacctgcgggcgctgtgcaaccgcgacgtgacggtg
acggccatcggcatcggggacatgttccacgagaagcacgagagcgagaacctgtactcc
atcgcctgcgacaagccgcagcaggtacgcaacatgacgcttttctccgacctggtggcc
gagaagttcatcgacgacatggaggacgtgctgtgcccggacccccagatcgtgtgcccg
gaacttccctgccaaacagagctgtacgtggcccagtgcacccagcggcccgtggacatc
gtcttcctgttggacggctccgagcggctgggcgagcagaacttccacaaggcgcggcgc
ttcgtggaggaggtgtcccggcggctgaccctggcgcgcagggacgacgacccgctcaac
gcgcgcgtggcgctgctgcagttcggaggcccgcgcgagcagcaggtggccttcccgctg
acctccaacctgaccgtcatccaggaggcgctggcgagcgcgcgctacctcaactccttc
tcgcacgtgggcgtgggcatcgtgcatgccatcaaccaggtggtgcgcagcacgcgggcc
ggtgcgcgccgccacgccgagctggacttcgtgttcctcacggacggcgtcacgggcaac
gacagcctggaggaggcggtgcactccatgcgcaagcagaacgtggtgcccaccgtggtg
gccgtgggcagcgacgtggacgcggacgtgctctccaagatcagcctgggtgacccggcc
gccatcttccgcgagaaggactacgacagcctggcccagcctggcttcttcgacaggttc
atccgctggatctgctag
DBGET
integrated database retrieval system
