Neophocaena asiaeorientalis asiaeorientalis (Yangtze finless porpoise): 112409549
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Entry
112409549 CDS
T08872
Symbol
THOC6
Name
(RefSeq) THO complex subunit 6 homolog isoform X1
KO
K13175
THO complex subunit 6
Organism
nasi
Neophocaena asiaeorientalis asiaeorientalis (Yangtze finless porpoise)
Pathway
nasi03013
Nucleocytoplasmic transport
nasi03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
nasi00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
112409549 (THOC6)
09122 Translation
03013 Nucleocytoplasmic transport
112409549 (THOC6)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
nasi03019
]
112409549 (THOC6)
03041 Spliceosome [BR:
nasi03041
]
112409549 (THOC6)
Messenger RNA biogenesis [BR:
nasi03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
TREX complex
112409549 (THOC6)
Spliceosome [BR:
nasi03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
112409549 (THOC6)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40_WDHD1_1st
WD40
Beta-prop_WDR3_1st
Beta-prop_THOC3
Beta-prop_WDR5
WD40_Prp19
Beta-prop_WDR36-Utp21_2nd
WDR55
WD40_CDC20-Fz
Beta-prop_WDR3_2nd
Beta-prop_EML
Beta-prop_TEP1_2nd
Beta-prop_EML_2
WD40_Gbeta
Beta-prop_IP5PC_F
NBCH_WD40
Beta-prop_WDR36-Utp21_1st
WDR54
EIF3I
WD40_MABP1-WDR62_2nd
Beta-prop_CAF1B_HIR1
Beta-prop_IFT122_1st
Beta-prop_TEP1_C
Beta-prop_EIPR1
Beta-prop_WDR75_1st
Beta-prop_RIG_2nd
Beta-prop_SCAP
Beta-prop_SPT8
Beta-prop_DCAF4
Motif
Other DBs
NCBI-GeneID:
112409549
NCBI-ProteinID:
XP_024615540
UniProt:
A0A341CMB4
LinkDB
All DBs
Position
Unknown
AA seq
341 aa
AA seq
DB search
MERTMPQAVPLGQMEVFQALQRLHMIIFSQNVSPCGKFLAAGNNYGQIAIFSLSAALSSE
AKEESKKPMVTFQAHDGPVYSMVSTDRHLLSAGDGEVKAWLWAEILKKGCKELWRRQPPY
RTSLEVPEINALLLVPKENSLILAGGDCQLHTMDLETGTFTRALWGHTDYIHCLALRERS
PEVLSGGEDGAVRLWDLRTAKEVQTIEVYKHEECSRPHNGRWIGCLATDSDWMVCGGGPA
LTLWHLRSSTPTTVFPMRAPQKHVTFYQDLILSAGQGRCVNQWQLSGELKAQVPGSSPGL
LSLSLNQQPAAPECKVLTAAGNSCRVDVFTNLGYRAFSLSF
NT seq
1026 nt
NT seq
+upstream
nt +downstream
nt
atggagcgaaccatgccgcaagcggtgcctctgggtcagatggaagtatttcaggccctg
cagcggctgcacatgatcattttttcccagaatgtctcaccctgtgggaagttcctggca
gccggcaacaattacgggcagatagccatctttagcttgtctgctgctttgagctctgag
gccaaagaggaaagtaagaagcccatggtgaccttccaagcccacgatggacccgtctac
agcatggtctccactgatcgacatctgctcagtgctggggatggggaggtgaaggcctgg
ctttgggcagagatccttaagaagggctgtaaggagctgtggcgtcgtcagcccccatac
aggaccagtctggaagtacctgagatcaatgctttgcttctcgtccccaaggagaattcc
ctcatcctggcagggggagactgtcagttgcatacgatggaccttgagacggggaccttc
acgcgggccctctggggccacacagactacatccactgcctggcactgcgggagcggagc
cccgaggtgctgtcaggtggcgaggatggggccgtgcggctttgggacctccgcacggcc
aaggaggtccagacgattgaggtctacaagcacgaggagtgctcgaggccccacaatggg
cgctggattggatgtttggcaactgactctgactggatggtctgtggaggtggcccagca
ctaaccctctggcaccttcgatcctccacacccaccaccgtcttccccatgcgggcacca
cagaagcatgttaccttctaccaggacttgattctatcagctggacagggtcgctgtgtc
aatcagtggcagctgagcggggagctcaaggcccaggtgcctggctcctccccagggctg
ctaagcctcagcctcaaccagcaaccagcagcccctgagtgcaaggtcctgacagccgca
ggcaacagctgcagggtggatgtcttcaccaatctgggctaccgagctttctccctgtcc
ttctga
DBGET
integrated database retrieval system
