Neophocaena asiaeorientalis asiaeorientalis (Yangtze finless porpoise): 112411489
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Entry
112411489 CDS
T08872
Symbol
PRPF4
Name
(RefSeq) U4/U6 small nuclear ribonucleoprotein Prp4 isoform X1
KO
K12662
U4/U6 small nuclear ribonucleoprotein PRP4
Organism
nasi
Neophocaena asiaeorientalis asiaeorientalis (Yangtze finless porpoise)
Pathway
nasi03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
nasi00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
112411489 (PRPF4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
nasi03041
]
112411489 (PRPF4)
Spliceosome [BR:
nasi03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6 snRNP specific factors
112411489 (PRPF4)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40_Prp19
WD40
WD40_CDC20-Fz
WD40_WDHD1_1st
Beta-prop_EML_2
Beta-prop_CAF1B_HIR1
EIF3I
WDR55
Beta-prop_WDR90_POC16_2nd
Beta-prop_WDR75_1st
Beta-prop_TEP1_2nd
WD40_MABP1-WDR62_2nd
PRP4
ANAPC4_WD40
WDR90_beta-prop_4th
Beta-prop_EML
WD40_MABP1-WDR62_1st
NBCH_WD40
Beta-prop_TEP1_C
Beta-prop_DCAF4
Beta-prop_SCAP
Beta-prop_EIPR1
Beta-prop_IFT122_1st
Beta-prop_Vps41
WD_LRWD1
Beta-prop_IFT140_1st
WD40_like
Ge1_WD40
Beta-prop_WDR35_TULP_N
Beta-prop_WDR11_1st
Motif
Other DBs
NCBI-GeneID:
112411489
NCBI-ProteinID:
XP_024618420
UniProt:
A0A341CVL1
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All DBs
Position
Unknown
AA seq
523 aa
AA seq
DB search
MASSRASSAVQATKTKASDDLVAPVVKKPHIYYGSLEEKERERLAKGESGILGKEGLKAG
IEAGNINITSGEVFEIEDHISERQAEVLAEFERRKRARQINVSTDDSEVKACLRALGEPI
TLFGEGPAERRERLRNILSVVGTDALKKTRKDDEKSKKSKEEYQQTWYHEGPNSLKVARL
WIANYSLPRAMKRLEEARLHKEIPETTRTSQMQELHKSLRSLNNFCSQIGDDRPISYCHF
SPNSKMLATACWSGLCKLWSVPDCNLLHTLRGHNTNVGAIVFHPKSTVSLDQKDVNLASC
AADGSVKLWSLDSDEPVADIEGHTVRVARVMWHPSGRFLGTTCYDRSWRLWDLEAQEEIL
HQEGHSMGVYDIAFHQDGSLAGTGGLDAFGRVWDLRTGRCIMFLEGHLKEIYGINFSPNG
YHVATGSGDNTCKVWDLRQRRCVYTIPAHQNLVTGVKFEPIHGNFLLTGAYDNTAKIWTH
PGWSPLKTLAGHEGKVMGLDISSSGQLIATCSYDRTFKLWMAE
NT seq
1572 nt
NT seq
+upstream
nt +downstream
nt
atggcctcctcacgagcttcctccgcggtacaggcaaccaaaactaaggcatctgatgac
ttagtcgctcctgttgtgaagaaaccacacatctattatggaagtttggaagagaaggag
agggagcgcctggccaaaggagaatctgggattttgggaaaagaaggacttaaagcagga
attgaagcagggaacattaacataacctctggagaagtgtttgaaattgaagaccacatc
agtgagcgacaggccgaggtgttagctgagtttgagaggaggaagcgagcccggcaaatc
aatgtttctacagatgactcagaggtcaaggcttgccttagggccttgggggaacccatc
acactttttggagagggtcctgctgaaagaagagaaaggttaagaaatatcctttcagtg
gtcggtactgatgccttaaaaaagaccagaaaagatgatgagaaatcaaagaagtccaaa
gaagagtatcagcaaacctggtaccatgaaggaccaaacagcctgaaggttgctagactg
tggattgctaattactcactgcccagggcaatgaaacgcttggaagaggcccgtcttcat
aaagagattcctgagacaacgagaacctcccagatgcaagaactgcacaaatctctccgg
tctttgaataatttctgcagtcagattggggatgatcggcctatctcctactgtcacttt
agtcccaattccaaaatgctggccacagcttgttggagtgggctttgcaagctctggtct
gttcctgattgcaacctcctccatactcttcgaggccataacacaaacgtgggagcaatt
gtattccatccaaaatccactgtctccttggaccaaaaagatgtcaatctggcctcttgt
gctgctgatggttctgtgaagctttggagccttgacagtgatgaaccagtggcagatatt
gaaggccatacagtgcgtgtggcccgtgtaatgtggcatccatcaggacgtttcttaggt
accacctgctatgaccgttcatggcgcttatgggatttggaggctcaagaggaaatcctg
catcaggaaggccacagcatgggtgtgtatgacattgccttccatcaagatggctctttg
gctggcactgggggactggatgcatttggtcgagtttgggacctgcgtacaggacgttgc
atcatgttcctggaaggtcacctgaaggaaatctatggaataaatttctcccccaatggc
taccacgttgcaactggcagtggtgacaacacctgcaaagtgtgggaccttcggcagcgg
cgttgtgtctataccattcctgcccaccagaacttagtgactggtgtcaagtttgagcct
atccatgggaatttcttgcttactggtgcctatgataacacagccaagatctggacccac
ccaggctggtcgccactgaagactctggccggccacgaaggcaaagtgatgggcctagac
atttcttccagcgggcagctcatagccacttgctcatatgacaggaccttcaagctctgg
atggctgaatag
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