KEGG   Neophocaena asiaeorientalis asiaeorientalis (Yangtze finless porpoise): 112411563
Entry
112411563         CDS       T08872                                 
Symbol
RXRA
Name
(RefSeq) retinoic acid receptor RXR-alpha
  KO
K08524  retinoid X receptor alpha
Organism
nasi  Neophocaena asiaeorientalis asiaeorientalis (Yangtze finless porpoise)
Pathway
nasi03320  PPAR signaling pathway
nasi04148  Efferocytosis
nasi04151  PI3K-Akt signaling pathway
nasi04659  Th17 cell differentiation
nasi04919  Thyroid hormone signaling pathway
nasi04920  Adipocytokine signaling pathway
nasi04928  Parathyroid hormone synthesis, secretion and action
nasi04932  Non-alcoholic fatty liver disease
nasi04976  Bile secretion
nasi05160  Hepatitis C
nasi05200  Pathways in cancer
nasi05202  Transcriptional misregulation in cancer
nasi05207  Chemical carcinogenesis - receptor activation
nasi05216  Thyroid cancer
nasi05222  Small cell lung cancer
nasi05223  Non-small cell lung cancer
nasi05226  Gastric cancer
nasi05417  Lipid and atherosclerosis
Brite
KEGG Orthology (KO) [BR:nasi00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   04151 PI3K-Akt signaling pathway
    112411563 (RXRA)
 09140 Cellular Processes
  09141 Transport and catabolism
   04148 Efferocytosis
    112411563 (RXRA)
 09150 Organismal Systems
  09151 Immune system
   04659 Th17 cell differentiation
    112411563 (RXRA)
  09152 Endocrine system
   04920 Adipocytokine signaling pathway
    112411563 (RXRA)
   03320 PPAR signaling pathway
    112411563 (RXRA)
   04919 Thyroid hormone signaling pathway
    112411563 (RXRA)
   04928 Parathyroid hormone synthesis, secretion and action
    112411563 (RXRA)
  09154 Digestive system
   04976 Bile secretion
    112411563 (RXRA)
 09160 Human Diseases
  09161 Cancer: overview
   05200 Pathways in cancer
    112411563 (RXRA)
   05202 Transcriptional misregulation in cancer
    112411563 (RXRA)
   05207 Chemical carcinogenesis - receptor activation
    112411563 (RXRA)
  09162 Cancer: specific types
   05226 Gastric cancer
    112411563 (RXRA)
   05216 Thyroid cancer
    112411563 (RXRA)
   05222 Small cell lung cancer
    112411563 (RXRA)
   05223 Non-small cell lung cancer
    112411563 (RXRA)
  09172 Infectious disease: viral
   05160 Hepatitis C
    112411563 (RXRA)
  09166 Cardiovascular disease
   05417 Lipid and atherosclerosis
    112411563 (RXRA)
  09167 Endocrine and metabolic disease
   04932 Non-alcoholic fatty liver disease
    112411563 (RXRA)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:nasi03000]
    112411563 (RXRA)
  09183 Protein families: signaling and cellular processes
   03310 Nuclear receptors [BR:nasi03310]
    112411563 (RXRA)
Transcription factors [BR:nasi03000]
 Eukaryotic type
  Zinc finger
   Cys4 hepatocyte nuclear factor 4-like
    112411563 (RXRA)
Nuclear receptors [BR:nasi03310]
 2. Hepatocyte nuclear factor 4 like
  2B. Retinoid X receptor (RXR)
   112411563 (RXRA)
SSDB
Motif
Pfam: Hormone_recep Nuc_recep-AF1 zf-C4 tRNA_bind_3
Other DBs
NCBI-GeneID: 112411563
NCBI-ProteinID: XP_024618558
UniProt: A0A341CV07
LinkDB
Position
Unknown
AA seq 439 aa
MAAPSLHPSLGPGIGSSLGSPGQLHSPISTLSSPINGMGPPFSVISSPMGPHSMSVPTTP
TLGFGTGSPQLNSPMNPVSSSEDIKPPLGLNGVLKVPAHPSGNMASFTKHICAICGDRSS
GKHYGVYSCEGCKGFFKRTVRKDLTYTCRDNKDCLIDKRQRNRCQYCRYQKCLAMGMKRE
AVQEERQRGKDRAENEVESTSSANEDMPVEKILEAELAVEPKTETYVEANVGLNPSSPND
PVTNICQAADKQLFTLVEWAKRIPHFSELPLDDQVILLRAGWNELLIASFSHRSIAVKDG
ILLATGLHVHRNSAHSAGVGAIFDRVLTELVSKMRDMQMDKTELGCLRAIVLFNPDSKGL
SNPAEVEALREKVYASLEAYCKHKYPEQPGRFAKLLLRLPALRSIGLKCLEHLFFFKLIG
DTPIDTFLMEMLEAPHQMT
NT seq 1320 nt   +upstreamnt  +downstreamnt
atggccgccccctcgctgcacccctccctggggcccggcatcggctcctcgctcggctcc
ccgggacagctgcactcgcccatcagcaccctgagctcccccatcaacggcatgggcccg
cccttctcggtcatcagctcccccatgggcccccactccatgtccgtgcccaccacaccc
accctgggcttcggcaccggcagcccccagctcaactcgcccatgaaccccgtcagcagc
agcgaggacatcaagcccccgctgggcctcaacggcgtcctcaaagtcccggcccatccc
tcagggaacatggcgtccttcaccaagcacatctgtgctatctgcggggaccgctcctca
ggcaagcactatggggtgtacagctgcgagggctgcaagggcttcttcaagcggacggtg
cgcaaggacctgacctacacctgccgggacaacaaagactgcctgattgacaagcggcag
cggaaccggtgccagtactgccgctaccagaagtgcctggccatgggcatgaaacgcgaa
gctgttcaggaggaacggcagcggggcaaggaccgggctgagaacgaggtggagtccacg
agcagcgccaacgaggacatgccggtggagaagatcctggaggccgagctggccgtcgaa
cccaagaccgagacgtacgtggaggcaaacgtggggctgaaccccagctcgcccaatgac
cctgtcaccaacatctgccaagcggcggacaaacagctcttcaccctggtggagtgggcc
aagcggatcccgcacttctccgagctgcccctggacgaccaggtcatcctgctgcgggca
ggctggaacgagctgctcatcgcctccttctcccaccgctccatagccgtgaaggacggc
atcctcctggccaccgggctgcacgtccaccgcaatagcgcccacagcgcgggggtgggc
gccatctttgacagggtgctgacggagctggtgtccaagatgcgggacatgcagatggac
aagacggagctgggctgcctgcgcgccatcgtcctcttcaaccccgactccaaggggctc
tcaaacccggccgaggtggaggcgcttcgcgagaaggtctacgcgtccctggaggcgtac
tgcaaacacaagtaccccgagcagccaggaaggtttgcaaagctgctgcttcgtctgccg
gccctgcgctccatcggcctcaagtgcctggaacacctcttcttcttcaaactcatcggg
gacacgcccatcgacaccttcctcatggagatgctggaagccccgcaccaaatgacttag

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