Neophocaena asiaeorientalis asiaeorientalis (Yangtze finless porpoise): 112411858
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Entry
112411858 CDS
T08872
Symbol
BARD1
Name
(RefSeq) BRCA1-associated RING domain protein 1 isoform X1
KO
K10683
BRCA1-associated RING domain protein 1
Organism
nasi
Neophocaena asiaeorientalis asiaeorientalis (Yangtze finless porpoise)
Pathway
nasi03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
nasi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
112411858 (BARD1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
nasi03019
]
112411858 (BARD1)
04121 Ubiquitin system [BR:
nasi04121
]
112411858 (BARD1)
03036 Chromosome and associated proteins [BR:
nasi03036
]
112411858 (BARD1)
03400 DNA repair and recombination proteins [BR:
nasi03400
]
112411858 (BARD1)
Messenger RNA biogenesis [BR:
nasi03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Negative regulators of mRNA 3' end processing
112411858 (BARD1)
Ubiquitin system [BR:
nasi04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
BRCC complex
112411858 (BARD1)
Chromosome and associated proteins [BR:
nasi03036
]
Eukaryotic type
Centrosome formation proteins
Centrosome duplication proteins
Regulators of centriole replication
112411858 (BARD1)
DNA repair and recombination proteins [BR:
nasi03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA1-core complex
112411858 (BARD1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-RING_6
Ank
Ank_4
Ank_2
Ank_5
Ank_3
BRCT
BRCT_2
Ank_KRIT1
zf-RING_5
ANK_LRRK2
zf-C3HC4
zf-C3HC4_2
RTT107_BRCT_5
zf-C3HC4_3
zf-C3HC4_4
Motif
Other DBs
NCBI-GeneID:
112411858
NCBI-ProteinID:
XP_024618959
UniProt:
A0A341CW53
LinkDB
All DBs
Position
Unknown
AA seq
778 aa
AA seq
DB search
MRGNKQPRVRSGNEPHPAPAMEPAGRGAWAHSRAALYRLEKLLRCSRCTNILRDPVCLGG
CEHIFCSNCVSDCIGTACPVCYTPAWIQDVKINRQLDSMIQLCSKLRNLLHDTDFSDVKE
ETSRKSLFSDAEYKKNSIKMWFSPRSKKVRYVVSKVSVQTHPPVINDENAQQASMYEFVS
ASPPVDVSERAKKASTKSGKKKKKKTLAEINQKWNLQKKAEKEDGKLDSEEEFKEKPVSF
CSQPSVTASPQINAKIDLLASGSITKSECFRSLTEVSLPLAEQIESPEIESRSEVVTPEK
TLCENNLTSKKSLPSGHNGKRGRRNRLSSSVSKRCRSSSPSTSENSIKRTVLSKNMPLPG
CSSPPSKKLEVGHTVRRKSSNILDESISPSPGTPPSTLNSPSYRRMMCSPSGMKLSPSSL
MAMKRNHRGETLLHIASIKGDIPSVEYLLQNGSDPNVKDHAGWTPLHEACNHGHLKVVEL
LLQHKALVNTTGYQNDSPLHDAAKNGHVDIVKLLLSYGASRSAVNIFGLRPVDYTDSENM
KSLLLLPEKNESSSTSHCSVVNTGQRRDGPLVLIGSGLSSEQQQMLSELAAILKAKKCAE
FDSTVTHVIVPGDTVQSTLKCMLGILSGCWILKFEWVKACLQRKEYEQEEKYEIPEGPRR
SRLNREQLLPKLFDGCYFYFGGSFRHHPKDSLIKLVTASGGQILSRKPKPDSDVTQTINT
VAYHAKPDSDQHFCTQYIIYEDLSNHLPERVRQGKVWIASSSWFIDCVMSFELIPLDS
NT seq
2337 nt
NT seq
+upstream
nt +downstream
nt
atgcgggggaacaagcagccgagggtccgctccgggaacgagcctcatcctgcgcccgcc
atggagccggctggtcgcggcgcatgggcccacagccgcgccgcgctctaccggctggag
aagctgctacgctgctcgcgttgcactaatattctgagggaccctgtgtgtttaggagga
tgtgagcacatcttctgtagtaattgtgtaagtgactgcattggaaccgcatgtccagtg
tgttacaccccagcctggatacaagatgtgaagataaatagacaattggacagcatgatc
cagctttgtagtaagcttcgaaatttgctacatgacactgatttttcagatgtgaaagaa
gaaacatctaggaaaagtttatttagtgatgcagaatataagaagaattcaataaaaatg
tggtttagtcctcgaagtaagaaggtcaggtatgttgtgagtaaagtttcagtgcaaact
catcctcctgtgataaacgatgaaaatgctcagcaggcctccatgtacgaatttgtctct
gcaagccctccagtggatgtttctgagagagctaagaaggcttccacaaaatctggaaaa
aaaaagaaaaagaaaactttggctgaaatcaaccaaaaatggaacttacagaaaaaggca
gaaaaagaagacggtaaacttgactccgaagaggaatttaaggaaaagccagtatccttc
tgtagccaaccatctgttactgctagtccgcagataaatgctaaaatagacttactagca
agtggctccataacaaaatctgaatgttttagaagcttaactgaagtctctttaccattg
gctgagcaaattgagtctccagaaattgagagcaggagtgaagtagtgactcctgagaag
actctctgtgaaaacaatcttacatctaagaaatccttgccatcaggtcataatgggaaa
cgtgggcgtcgcaacagactttccagttctgtttctaagagatgtagaagcagcagtccg
agcaccagtgaaaattctattaagcgaacagtgctctcaaaaaacatgccattgcctgga
tgttcttcaccaccttcaaagaaacttgaagttggtcacacagtgaggaggaaaagcagt
aatatattagatgaatccattagcccttcaccaggtacgcccccttctacactgaatagt
ccaagttacagacgaatgatgtgtagtccctcaggaatgaagctatcgcccagtagtctt
atggctatgaaaagaaatcatcgaggagagactttgctccatattgcttcaattaagggc
gacataccttctgttgaatacctcttacaaaatggaagtgacccgaatgttaaagaccat
gctggatggacaccattgcacgaagcctgcaatcacgggcacctgaaggtggtggaattg
ctgctccagcacaaggcgttggtgaacaccactgggtatcagaatgactcacctcttcac
gacgcagccaagaatgggcacgtggatatagtcaagctgttactctcctatggagcctcc
aggagcgcggttaacatatttggtctgcggcctgtggattatacagacagtgaaaatatg
aaatcgctgttgctgctaccagagaagaatgaatcatcatcaactagccattgttcagta
gtaaacactggtcagcgcagggatgggcctcttgtacttataggcagtggactttcttca
gaacaacagcaaatgctcagtgagcttgcagcaattcttaaggctaaaaaatgtgctgag
tttgacagtacagtaactcatgtcattgttcctggtgatacagttcaaagcaccctgaaa
tgtatgcttgggattctcagtggttgctggatcctaaaatttgaatgggtgaaagcatgt
ctacaaagaaaagaatatgaacaggaagaaaagtatgaaattcctgaaggaccacgtaga
agcaggctcaacagagaacagctgttgccaaagctgtttgatggatgctatttctatttt
gggggaagcttcagacaccatccaaaggacagccttattaagcttgtcactgcatctggg
ggacagatcctcagtagaaagcccaagccagacagtgacgtgactcaaaccatcaataca
gtcgcgtaccatgccaaacctgattctgatcagcacttctgcacacagtatatcatctat
gaggatttgtctaatcatctcccagagagagttaggcagggcaaagtctggatagcttct
tccagctggtttatagattgtgtgatgtcctttgagttgatccctcttgacagctga
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integrated database retrieval system
