Neophocaena asiaeorientalis asiaeorientalis (Yangtze finless porpoise): 112412796
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Entry
112412796 CDS
T08872
Symbol
TRIM54
Name
(RefSeq) tripartite motif-containing protein 54
KO
K10653
tripartite motif-containing protein 54
Organism
nasi
Neophocaena asiaeorientalis asiaeorientalis (Yangtze finless porpoise)
Pathway
nasi04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
nasi00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
112412796 (TRIM54)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
nasi04121
]
112412796 (TRIM54)
Ubiquitin system [BR:
nasi04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
112412796 (TRIM54)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-RING_UBOX
zf-C3HC4_2
zf-C3HC4
RING_XB3-XBAT31
zf-B_box
zf-RING_5
zf-RING_2
zf-C3HC4_4
zf-C3HC4_3
zf-RING_6
Sina_RING
PHP
DUF349
UvrD_C
DUF1421
Zn_ribbon_FGT1_2
zf-RING_11
Motif
Other DBs
NCBI-GeneID:
112412796
NCBI-ProteinID:
XP_024620283
UniProt:
A0A341CZV0
LinkDB
All DBs
Position
Unknown
AA seq
364 aa
AA seq
DB search
MNFTVGFKPLLGDAHSMDSLEKQLICPICLEMFSKPVVILPCQHNLCRKCANDVFQASNP
LWQSRGSTTVSSGGRFRCPSCRHEVVLDRHGVYGLQRNLLVENIIDIYKQESSRPLHSKA
EQHLMCEEHEDEKINIYCLSCEVPTCSLCKVFGAHKDCEVAPLPTIYKRQKSELSDGISM
LVAGNDRVQAVITQMEEVCQTIEDNSRRQKQLLNQRFEALCAVLEERKGELLQALALKQE
EKLQRVRGLIRQYGDHLEASSKLVESAIQSMEEPQMALYLQQAKELINKVGTMSKVELGG
RPEPGYESMEQFTVSVEHVAEMLRTIDFQPGASGEEEDEEVALDGEEGSAGPEEERLEGP
EGLH
NT seq
1095 nt
NT seq
+upstream
nt +downstream
nt
atgaacttcacagtgggtttcaagccactgctaggggatgcacacagcatggacagcctg
gagaagcagctcatctgccccatctgcctggagatgttctccaaaccggtggtgatcctg
ccctgccagcacaacctgtgccgcaagtgtgccaatgacgtcttccaggcctcaaacccg
ctgtggcaatcccggggttccaccactgtgtcttcaggaggccgtttccgctgcccgtct
tgcaggcatgaggttgtcctggaccgacatggtgtctacggcctgcagcggaacctgcta
gtggagaacattatcgacatttacaagcaggagtcctcccggccgctgcattccaaggct
gagcagcacctcatgtgcgaggagcacgaagatgagaagatcaatatctactgcctgagc
tgtgaagtgcccacctgctctctctgcaaggtcttcggcgcccacaaggactgtgaggtg
gccccactgcccaccatttacaaacgccagaagagtgagctcagtgatggcatctcaatg
ctggtggcaggcaacgaccgtgtgcaagcagtgatcacacagatggaggaggtgtgccag
accattgaggacaacagccggaggcagaagcagttgctaaaccagaggtttgaggccctg
tgcgcagttctggaggagcgtaagggtgagctgctgcaggcgctggccctgaagcaggag
gagaagctgcagcgcgtcaggggcctcatccgccagtacggagaccacctggaggcctcc
tctaagctggtggagtccgccatccagtccatggaggaaccgcagatggcgctctacctg
cagcaggccaaggagctgatcaataaggtcgggacaatgtcaaaggtggagctgggtgga
cggccggagccgggctatgaaagcatggagcaattcaccgtgagcgtggagcatgtggcc
gaaatgctgaggaccatcgacttccagccaggcgcttctggggaggaagaggatgaggag
gtagcgttggacggggaagagggcagcgcagggccagaggaagagcggctggaggggccg
gaaggcctgcactga
DBGET
integrated database retrieval system
