Neophocaena asiaeorientalis asiaeorientalis (Yangtze finless porpoise): 112413143
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Entry
112413143 CDS
T08872
Symbol
LSM1
Name
(RefSeq) U6 snRNA-associated Sm-like protein LSm1
KO
K12620
U6 snRNA-associated Sm-like protein LSm1
Organism
nasi
Neophocaena asiaeorientalis asiaeorientalis (Yangtze finless porpoise)
Pathway
nasi03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
nasi00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
112413143 (LSM1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
nasi03019
]
112413143 (LSM1)
Messenger RNA biogenesis [BR:
nasi03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
112413143 (LSM1)
mRNA degradation factors
5'-3' decay
Lsm complex
112413143 (LSM1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LSM
Motif
Other DBs
NCBI-GeneID:
112413143
NCBI-ProteinID:
XP_024620771
UniProt:
A0A341D190
LinkDB
All DBs
Position
Unknown
AA seq
133 aa
AA seq
DB search
MNYMPGTASLIEDIDKKHLVLLRDGRTLIGFLRSIDQFANLVLHQTVERIHVGKKYGDIP
RGIFVVRGENVVLLGEIDLEKESDTPLQQVSIEEILEEQRVEQQTKLEAEKLKVQALKDR
GLSIPRADTLDEY
NT seq
402 nt
NT seq
+upstream
nt +downstream
nt
atgaactatatgcctggcaccgccagcctcatcgaggacatcgacaaaaagcacttggtc
ctgcttcgagatggaaggacgcttataggctttttaagaagcattgatcaatttgctaac
ttagtgctacatcagactgtggagcgtattcatgtgggcaaaaaatacggtgatattcct
cgagggatttttgtggtcagaggagaaaatgtggtcctactaggagaaatagacttggaa
aaggagagtgacacacccctccagcaagtgtctattgaagaaatcctagaagaacagagg
gtggagcagcagaccaagctggaagccgagaagctgaaagtccaggccctgaaggatcga
ggcctgtctatccctcgagcagatactcttgatgagtattaa
DBGET
integrated database retrieval system
