Neophocaena asiaeorientalis asiaeorientalis (Yangtze finless porpoise): 112413511
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Entry
112413511 CDS
T08872
Symbol
PCDH8
Name
(RefSeq) LOW QUALITY PROTEIN: protocadherin-8
KO
K16499
protocadherin delta 2
Organism
nasi
Neophocaena asiaeorientalis asiaeorientalis (Yangtze finless porpoise)
Brite
KEGG Orthology (KO) [BR:
nasi00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
nasi04515
]
112413511 (PCDH8)
Cell adhesion molecules [BR:
nasi04515
]
Cadherins
Protocadherins
112413511 (PCDH8)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
Motif
Other DBs
NCBI-GeneID:
112413511
NCBI-ProteinID:
XP_024621239
UniProt:
A0A341D2T3
LinkDB
All DBs
Position
Unknown
AA seq
1071 aa
AA seq
DB search
MSPARRGGIPCLFPLQLFSLCWVLSVAQSKTVRYSTFEEDAPGTVIGTLAEDLHMKVSGD
TSFRLMKQFNSSLIRVREGDGQLTVGDAGLDRERLCGQAPQCVLAFDVVSFSQEQFRLVH
VEVEVRDVNDHAPRFPRAQIPVEVSEGAAVGTRIPLEVPVDEDVGANGLQSVRLAEPHSP
FRVELQTRADGAQCADLVLLQELDRESQAAYNLELVAQDGGRPPRSATAALSVRVLDAND
HSPAFPQGAVAEVELAEDAPVGSLLLDLDAADPDEGPNGDVVFAFGSRTPPEARRLFRLD
PRSGRLTLAGPVDYERQDTYELDVRAQDRGPGPRAATCKVIVRIRDVNDNAPDIAITPLA
APGAPVASPFAAAAAALGGADATSSTGPGTPEAGAISLVPEGAARESLVALVSTSDRDSG
ANGQVRCALYGHEHFRLQPAYAGSYLVVTAGSLDRERIAEYNLTLVAEDRGAPPLRTVRP
YLVRVSDENDNEPLFTRPVYEVTVRENNPPGAYLATVAARDPDLGRNGQVTYRLLEAEVG
RAGGAVSTYVSVDPATGAIYALRSFDYETLRQLDVRIQASDGGSPQLSSSALVQVRVLDQ
NDHAPVLVHPAPANGSLEVAVPGRTARDTAVARVQARDADEGANGELAFDLLQQEPREAF
AIGSRTGEIVLTGDLSQEPPGRVFRALLVVSDGGRPPLSTTAAVSFVVTAGGGRGLVSPA
SAANSERSRPPGSRLATSGPALQWDTPLIVIIVLAGSCTLLLAAIIAIATTCNRRKKEVR
KGGPRRXXXXXXXXXXXXXXXXXXXXXXXXXXGPRPNMFDVLTFPGSGKAPFGSPAADAP
PPAVAAAEVPGSEGGSATGESSCHFEGQQRLRGAHAEPYGASPGFGKEPAPPVAVWKGHS
FNTISGREAEKFSGKDSGKGDSDFNDSDSDISGDALKKDLISHMQSGLWACTAECKILGH
SDRCWSPSCAGGPSTHASTHPPAQMSTFCKSTSLPRDPLRRDNYYQAQLPKTVGLQSVYE
KVLHRDYDRTVTLLSPPRPGRLPDLQEIGVPLYESSPGRYLSPKKEDNENV
NT seq
3216 nt
NT seq
+upstream
nt +downstream
nt
atgagtccagcgaggcgcgggggaatcccctgccttttccccctgcagctcttcagtctt
tgctgggtgctctccgtggcccagagcaagacagtgcgatacagcactttcgaggaggat
gcccccggaacggtcatcgggaccctggctgaagacctgcatatgaaagtgtccggagac
acaagcttccgcctgatgaagcagttcaacagctcgctgatccgagtgcgcgagggcgac
gggcagctgaccgtcggagacgcgggcctggaccgcgagcggctgtgcggccaggccccg
cagtgcgtgctggccttcgacgtggtcagcttctcgcaggagcagttccggctggtgcac
gttgaagtggaggtgagagacgtcaatgaccacgcgccgcgctttccccgggcccagatc
cccgtggaggtgtccgaaggcgcggccgtgggcacgcgcatacccttagaggtgccggtg
gacgaggacgtgggcgccaatgggctgcagagcgtgcgcctggccgagccgcacagcccc
ttccgcgtggagctgcagacgcgcgcggacggtgcccagtgcgccgacctggtgctgctg
caggagctggaccgcgagagccaggccgcctacaacctggagttggtggcccaggacgga
ggccgcccgccgcgctccgccacggccgccctcagtgtgcgcgtgctggacgcgaacgac
cacagcccggccttcccgcagggcgccgtggccgaggtggagctggcggaggacgcgccc
gtgggctcgctactgctcgacctggacgcggcggaccccgacgagggccccaacggcgac
gtggtgttcgccttcggctcccgtaccccgccggaggcgcgccgcctcttccgcctcgat
ccgcgctcgggccgcctcaccctggccgggcccgtggactacgagcgccaggacacttac
gaactggacgtgcgggcgcaggaccgcggccccgggccccgcgccgccacctgcaaggtc
atcgtgcgcatccgcgacgtcaatgacaacgcgccggacatcgccatcaccccgctggcc
gccccgggcgcgcctgtcgcctcgcccttcgccgccgccgccgctgctctcgggggtgcg
gacgcgacctcgtcgaccgggcccgggacgccagaggccggagccatctctctagtgcca
gagggggcggcacgcgagagcctggtggcgctggtcagcacctcggacagggactcggga
gccaacgggcaggtgcgctgcgccctctatgggcacgagcacttccgactgcagccggcc
tacgcgggcagctacctggtggtgaccgcggggtcgctggaccgcgagcgcatcgccgag
tacaacctgaccctggtggccgaggaccgcggcgcgcccccgctgcgcaccgtgcggccc
tacctggtgcgggtgagcgacgagaacgacaacgagccgctcttcacgcggccggtctac
gaggtgacggtgcgtgagaataacccgcccggggcttacttggccacggtggccgccagg
gacccggacctgggccgcaacggacaggtcacctaccggctgctggaggccgaggtgggc
cgcgctgggggcgccgtgtccacctatgtctcggtggacccggctaccggggccatctac
gcgctgcgcagcttcgactatgagacgcttcgccagctcgacgtgcgcatccaagcgagc
gacggcggctcccctcagctctccagcagtgccctggtgcaagtgcgggtgcttgaccag
aacgaccacgcaccggtcctggtgcacccggcaccggccaacggctccctggaagtggcg
gtccccgggcgcacggcaagggacacggccgtggcgcgcgtgcaggcccgggacgcagac
gagggtgccaacggggagctggcattcgaccttctacagcaggagccgcgagaagccttc
gccatcggcagccgaacgggggagatcgtgctcaccggcgacctatctcaggagccgccc
ggccgagtattccgggcgttgctggtcgtatccgacggcggccggcccccgctctccacc
accgccgctgtcagcttcgtggtgacagcaggaggcgggcgcgggctggtgtctccagcc
agtgcagcgaactcggagcgctctcgccctcccggctctcggctcgcgacgtcggggccg
gcgctacagtgggacacgccgctgatcgtcatcatcgtgctggccgggagctgcacgctg
cttctggccgccatcatcgccatcgccaccacctgcaaccgccgcaagaaggaggtgcgc
aaaggggggccccgccgnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn
nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnncgggcccaggcccaacatgttcgac
gtgctcaccttccctggcagcggcaaagcgccctttggcagccccgcggccgacgcgccc
ccgcccgcggtcgccgcggccgaagtgccgggctcggagggcggcagcgccaccggggaa
agctcctgtcacttcgaggggcagcagcggctccgcggcgcgcacgccgagccctacggc
gcctcccctggtttcggaaaggagccggcgccccctgtggctgtctggaaaggacattct
ttcaacaccatctccggccgagaagcggagaagttcagcggcaaagacagcggcaaaggg
gacagtgatttcaacgatagcgattccgacatcagcggggacgctctgaagaaggatctc
atcagccacatgcagagtggactgtgggcatgcaccgcggagtgtaagatcctgggccac
tctgaccgatgctggagcccctcctgcgctggagggcccagcacacatgcttccactcac
cccccagcccagatgtcgaccttctgtaagagcacgtccctgccccgggatcctctccgt
agggacaattactaccaggcccagctgcccaagacagtggggctgcagagcgtctatgag
aaagtgctacacagagactatgacaggacagtcactctgctctcccctcctcgtccaggg
aggctcccagacttgcaggagattggggtacccctctatgagtcctcccctggcaggtac
ctgtccccaaagaaggaagacaatgaaaatgtgtaa
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