Neophocaena asiaeorientalis asiaeorientalis (Yangtze finless porpoise): 112414260
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Entry
112414260 CDS
T08872
Symbol
SRRM1
Name
(RefSeq) serine/arginine repetitive matrix protein 1 isoform X1
KO
K13171
serine/arginine repetitive matrix protein 1
Organism
nasi
Neophocaena asiaeorientalis asiaeorientalis (Yangtze finless porpoise)
Pathway
nasi03013
Nucleocytoplasmic transport
nasi03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
nasi00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
112414260 (SRRM1)
03015 mRNA surveillance pathway
112414260 (SRRM1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
nasi03019
]
112414260 (SRRM1)
03041 Spliceosome [BR:
nasi03041
]
112414260 (SRRM1)
Messenger RNA biogenesis [BR:
nasi03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
112414260 (SRRM1)
Spliceosome [BR:
nasi03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
SR-related proteins
112414260 (SRRM1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PWI
FliX
Motif
Other DBs
NCBI-GeneID:
112414260
NCBI-ProteinID:
XP_024622400
UniProt:
A0A341D6Q5
LinkDB
All DBs
Position
Unknown
AA seq
918 aa
AA seq
DB search
MDAGFFRGTSAEQDNRFSNKQKKLLKQLKFAECLEKKVDMSKVNLEVIKPWITKRVTEIL
GFEDDVVIEFIFNQLEVKNPDSKMMQINLTGFLNGKNAREFMGELWPLLLSAQENIAGIP
SAFLELKKEEIKQRQIEQEKLASMKKQDEDKDKRDKEEKESSREKRERSRSPRRRKSRSP
SPRRRSSPVRRERKRSHSRSPRHRTKSRSPSPAPEKKEKTPELPEPSVKVKEPSVQEATS
TSDILKVPKPEPVPEPKEPSPEKNSKKEKEKEKTRPRSRSRSKSRSRTRSRSPSHTRPRR
RHRSRSRSYSPRRRPSPRRRPSPRRRTPPRRMPPPPRHRRSRSPVRRRRRSSASLSGSSS
SSSSSRSRSPPKKPPKRTSSPPRKTRRLSPSASPPRRRHRPSPPATPPPKTRHSPTPQQS
NRTRKSRVSVSPGRTSGKVTKHKGTEKRESPSPAPKPRKVELSESEEDKGGKMAAADSVQ
QRRQYRRQNQQSSSDSGSSSSSEDERPKRSHVKNGEVGRRRRHSPSRSASPSPRKRQKET
SPRMQMGKRWQSPVTKSGRRRRSPSPPPARRRRSPSPAPPPRRRRSPTPPPRRRTPSPPP
RRRSPSPRRYSPPIQRRYSPSPPPKRRTASPPPPPKRRPSPSPPPKRRVSHSPPPKQRSS
PVTKRRSPSLSSKHRKGSSPSRSTREARSPQPNKRHSPSPRPRAPQTSSSPPAVRRGASS
SPQRRLSPSPSSRPIRRVSRTPEPKKIKKAASPSPQSVRRVSSSRSVSGSPEPAAKKPPA
PPSPVQSQSPSTNWSPAVPVKKAKSPTPSPSPARNSDPEGGGKKKKKKKDKKHKKDKKHK
KHKKHKKEKAVAAAAAAPVTPAAIAAPTTASAQEEPEAEPEPKKETESEAEDNLDDLEKH
LREKALRSMRKAQVSPQS
NT seq
2757 nt
NT seq
+upstream
nt +downstream
nt
atggacgcgggattcttccgcggaacaagtgcagaacaggataatcggttcagcaacaaa
cagaagaagctactgaagcagctgaaattcgcagaatgcctagaaaaaaaggtggacatg
agcaaagtaaatttggaggttataaagccttggataacaaaacgagtaacggaaatcctt
gggtttgaagatgatgttgtgattgagtttatattcaaccagctggaagtgaagaatcca
gactccaaaatgatgcaaatcaacctgactgggtttttgaatggaaaaaatgctagagaa
tttatgggagaactgtggcccctgctcttaagtgcacaagaaaacatcgctggaatccct
tctgctttcctagaactgaagaaagaagaaataaaacagagacagattgaacaagaaaag
ttggcatctatgaaaaagcaagatgaagacaaggataagagggataaggaagaaaaagaa
agcagcagagaaaagagggagcggtctcgaagcccaagaagacgcaaatccagatctcct
tcccctagaagacgatcttcccctgtcaggagagagagaaagcgcagtcattctcgatct
ccccgtcacagaaccaagagccggagtccttcccctgctccagagaagaaggaaaaaact
ccagagctcccagagccatcagtgaaagtaaaagaaccttcagtacaagaggccacttct
actagtgacatcctgaaagttcccaagcctgaaccagtaccagagcctaaagaaccttct
ccggagaaaaactccaaaaaggaaaaggaaaaggagaagacccgaccaagatctcggtcg
cgttccaagtcaagatcccggacacgttctcgctctccttctcatactcgaccgaggagg
cgccatagatcccgatcaagatcatactcacctagaaggcggccaagcccaagaagacgg
ccatctcctcgaagaagaactccaccgagacgaatgcctcctccaccaaggcatagaagg
agtagatctccagtgagacgaagaaggcgttcatcggcatccttgtccgggagtagctcg
tcctcttcttcatctcgttcccggtcaccgccaaagaagcctccaaagaggacatccagc
ccccctcgaaaaactcgtaggttatctccttcagcaagtcctccgaggcgaaggcacagg
ccatcacctccagcaactccaccaccaaaaactcgtcattccccgacaccccagcagtca
aaccgtacgaggaaaagtcgtgtttctgtctctccagggagaacttcaggtaaagtgaca
aaacataaaggtactgagaaaagagagtccccttcaccagcacccaagcctagaaaagta
gagttatctgaatcagaagaagataaaggtggcaaaatggctgcagcagattctgtgcag
cagagacgccaatacagacgacagaaccagcagtcttcctctgattctggctcctcctct
tcctcagaagatgagcgacccaaaaggtcccacgtgaagaatggtgaggtaggcaggcgg
cggagacattccccttcccggagtgcctctccatcacctcgaaagcgccagaaagagact
tcccctcggatgcagatgggaaagcgatggcaatcgccagtgactaaaagtggtagacgg
aggagaagcccctccccaccgcctgccagaaggcgacgttctccttctcctgctcctcca
cctcgtcgacgcaggtctcccacaccaccaccacgacgcaggactccttctcctccccca
cgtcgtcgctcaccttccccaagaagatactctcctccaatacagaggagatattctcct
tctccacctccaaagagaagaacggcttcaccccctccccctcctaaacgaaggccatca
ccgtctccaccaccaaagcgtcgggtctcccattcgccacctcccaaacaaagaagctcc
ccagtcaccaagagacgttcgccttcgttgtcatcaaagcatcggaaagggtcttccccg
agccgatctacccgggaggcccggtcaccacaaccaaacaaacggcattcgccctcacca
cggcctcgagctcctcagacctcctcaagtcctccagctgttcgaagaggagcatcgtca
tcaccccaaagaaggctgtccccatctccaagttctaggcccattaggagagtctccagg
actccggaacccaaaaagataaaaaaagctgcctcaccaagccctcagtcggtaaggagg
gtctcatcttcccgatctgtctcgggatctcctgagccagcagctaaaaaacccccagca
cctccatcccctgtccagtctcagtcaccctctaccaactggtcaccagcggtaccggtt
aaaaaggctaaaagcccaacaccaagcccatcaccggcaaggaattcagacccagaagga
ggtggaaagaaaaagaagaaaaagaaggacaagaaacacaaaaaggataagaagcacaag
aagcacaaaaaacacaagaaggaaaaggctgtagctgcagctgctgcagctcctgtgacc
cctgcagccattgctgctcccacaaccgcgtcagcacaggaagaaccagaggcagagcca
gagcctaagaaggagactgaaagtgaggctgaagataaccttgatgacttagaaaagcac
ctgcgtgaaaaggccctgagatcaatgcggaaggctcaagtgtccccacagtcctag
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