Neophocaena asiaeorientalis asiaeorientalis (Yangtze finless porpoise): 112414479
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Entry
112414479 CDS
T08872
Symbol
CHD1
Name
(RefSeq) chromodomain-helicase-DNA-binding protein 1 isoform X1
KO
K11367
chromodomain-helicase-DNA-binding protein 1 [EC:5.6.2.-]
Organism
nasi
Neophocaena asiaeorientalis asiaeorientalis (Yangtze finless porpoise)
Brite
KEGG Orthology (KO) [BR:
nasi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
nasi03021
]
112414479 (CHD1)
03036 Chromosome and associated proteins [BR:
nasi03036
]
112414479 (CHD1)
Transcription machinery [BR:
nasi03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
SAGA/TFTC/STAGA complex
112414479 (CHD1)
Chromosome and associated proteins [BR:
nasi03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
SAGA complex
112414479 (CHD1)
SLIK complex
112414479 (CHD1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
HTH_CHD1_Hrp3
CDH1_2_SANT_HL1
CHD1-like_C
Chromo
Helicase_C
DEAD
Motif
Other DBs
NCBI-GeneID:
112414479
NCBI-ProteinID:
XP_024622728
UniProt:
A0A341D6R9
LinkDB
All DBs
Position
Unknown
AA seq
1797 aa
AA seq
DB search
MNGHSDEESVRNSSGESSQSDDDSGSASGSGSGSSSGSSSDGSSSQSGSSDSDSGSESGS
QSESESDNSRENKVQAKPPKVDGAEFWKSSPSILAVQRSAMLKKQQQQQHQTSSNSGSEE
DSSSSEDSDDSSSEVKRKKHKDEDWQMSGSGSPSQSGSDSESEEERDKSSCDETESDYEP
KNKVKSRKPQNRSKSKNGKKIIGQKKRQIDSSEEEEEDEEDYDNDKRSSRRQATVNISYK
EDEEMKTDSDDLLEVCGEDVPQPEEEEFETIERFMDCRIGRKGATGATTTIYAVEADGDP
NAGFEKNKEPGEIQYLIKWKGWSHIHNTWETEETLKQQNVRGMKKLDNYKKKDQETKRWL
KNASPEDVEYYNCQQELTDDLHKQYQIVERIIAHSNQKSAAGYPDYYCKWQGLPYSECSW
EDGALISKKFQACIDEYFSRNQSKTTPFKDCKVLKQRPRFVALKKQPSYIGGHEGLELRD
YQLNGLNWLAHSWCKGNSCILADEMGLGKTIQTISFLNYLFHEHQLYGPFLLVVPLSTLT
SWQREIQTWASQMNAVVYLGDINSRNMIRTHEWMHPQTKRLKFNILLTTYEILLKDKAFL
GGLNWAFIGVDEAHRLKNDDSLLYKTLIDFKSNHRLLITGTPLQNSLKELWSLLHFIMPE
KFSSWEDFEEEHGKGREYGYASLHKELEPFLLRRVKKDVEKSLPAKVEQILRMEMSALQK
QYYKWILTRNYKALSKGSKGSTSGFLNIMMELKKCCNHCYLIKPPDNNEFYNKQEALQHL
IRSSGKLILLDKLLIRLRERGNRVLIFSQMVRMLDILAEYLKYRQFPFQRLDGSIKGELR
KQALDHFNAEGSEDFCFLLSTRAGGLGINLASADTVVIFDSDWNPQNDLQAQARAHRIGQ
KKQVNIYRLVTKGSVEEDILERAKKKMVLDHLVIQRMDTTGKTVLHTGSAPSSSTPFNKE
ELSAILKFGAEELFKEPEGEEQEPQEMDIDEILKRAETHENEPGPLTVGDELLSQFKVAN
FSNMDEDDIELEPERNSKNWEEIIPEDQRRRLEEEERQKELEEIYMLPRMRNCAKQISFN
GSEGRRSRSRRYSGSDSDSVSERKRPKKRGRPRTIPRENIKGFSDAEIRRFIKSYKKFGG
PLERLDAIARDAELVDKSETDLRRLGELVHNGCIKALKDNSSGTERTGGRLGKVKGPTFR
ISGVQVNAKLVISHEEELIPLHKSIPSDPEERKQYIIPCHTKAAHFDIDWGKEDDSNLLI
GIYEYGYGSWEMIKMDPDLSLTHKILPDDPDKKPQAKQLQTRADYLIKLLSKDLARKEAQ
RLSGAGGSKRRKVRAKKNKAMKSIKMKEEIKSDSSPLPSEKSDEDDDKDEITSVKHPNKK
VKTERDSEEKPEPDVCIKKEPEEKREAKEKENKRELKREIKEKEDKKDIKEKDFKEKREN
KVKEAIQKEKDIKEEKLSESKSDSKERSKKSSVSDAPVHITASGEPVPISEESEELDQKT
FSICKERMRPVKAALKQLDRPEKGLSEREQLEHTRQCLIKIGDHITECLKEYTNPEQIKQ
WRKNLWIFVSKFTEFDARKLHKLYKHAIKKRQESQQNNDQNSNLNTQVIRNPDVERLKEN
TNHDDSSRDSYSSDRHLSQYHDHHKDRHQGDSYKKSDSRKRPYSSFSNGKDHRDWDHYKQ
DSRYYSDREKHRKLDDHRSRDHRSNLEGSLKDRTHSDHRSHSDHRLHSDHRSSSEYTHHK
SSRDYRYHSDWQLDHRASSSGSRSPLDQRSPYGSRSPFEHSIEHRSTPEHTWSSRKT
NT seq
5394 nt
NT seq
+upstream
nt +downstream
nt
atgaatggacacagtgatgaagaaagtgttagaaacagtagtggagagtcaagccagtcg
gatgatgattctgggtcagcgtcaggctctggatctggttcaagttctggaagcagtagt
gatggaagcagtagccagtcaggtagcagtgactctgattctggatccgaatcgggcagt
cagtcagagtctgagtcagacaattcccgagaaaataaagttcaagcaaaaccaccgaaa
gttgatggagctgagttttggaaatctagccctagtattctggctgttcagagatctgca
atgctcaagaagcagcagcagcagcaacatcaaacttcatctaatagtggatcagaagag
gattcttctagcagtgaagattctgatgactcatcgagtgaggtcaaaaggaaaaaacat
aaagatgaagattggcagatgtctgggtcaggatctccatctcagtctggttcagattca
gaatctgaagaagaaagagataaaagtagttgtgatgaaacagaatctgattatgagcca
aaaaacaaagttaaaagtagaaaacctcagaatagatctaagtcaaaaaatggaaaaaag
attattggacaaaaaaagagacagattgattcatctgaggaggaggaggaggatgaagaa
gactatgataatgataaaagaagctctcgtcgacaagcaactgtcaatattagctataag
gaagacgaagaaatgaaaacagattctgatgacctacttgaagtctgtggagaggatgtt
cctcaacccgaggaagaggaatttgaaacaatagaacggtttatggattgtcggattggg
agaaaaggagctactggtgctactacaaccatctatgcagttgaagcagatggtgaccca
aatgcaggatttgaaaaaaacaaggaaccaggagagatccagtatttaattaaatggaaa
ggatggtcacatatccacaatacttgggagacagaagaaacccttaagcagcagaatgtt
agaggaatgaaaaaattagataattataagaaaaaagatcaggaaacaaaaagatggttg
aaaaatgcttctccagaagatgtggaatattataattgccagcaagaacttacagatgat
ctccataagcagtatcaaatagtggagcgaataattgctcattcaaatcaaaagtcagct
gctggctatcctgattattattgcaaatggcagggccttccatactcagagtgcagctgg
gaagatggagctctcatttccaaaaagtttcaggcgtgcatagatgagtatttcagcagg
aatcagtcaaaaactactccttttaaagactgcaaagttttaaaacaaaggccaagattt
gtagccctgaagaagcagccatcctatattggaggacatgagggattagaattaagagat
tatcaactgaatggtttaaattggcttgctcactcttggtgcaaaggaaatagttgcata
ctcgctgatgaaatgggccttggaaaaacaatacagacgatctcatttctaaactatttg
tttcatgaacaccaattatatggaccttttctattagtagtaccactctccactctcact
tcctggcaaagggagattcaaacatgggcttctcaaatgaatgctgtggtttatttaggt
gacatcaacagcagaaacatgataagaactcatgaatggatgcatccccagaccaaacgg
ttaaagtttaatatactgttaacaacttatgaaatcttattgaaggataaggcattcctt
ggaggcctaaattgggcatttataggtgtagatgaagcacatcgattaaagaatgatgat
tctcttctgtataaaactttaatagattttaagtccaatcaccgtctccttatcactgga
actcctctgcaaaactccctgaaagagctctggtctttgctacatttcattatgccagaa
aagttttcttcctgggaagattttgaagaagaacatggcaaaggcagagaatatggttat
gcaagcctccacaaggagcttgagccatttctgttacgcagggttaagaaagatgtggaa
aaatctcttcctgccaaggttgagcagattttaagaatggaaatgagtgctttacagaaa
caatactacaaatggatattaactaggaattacaaagccctcagcaaaggttccaagggc
agtacctcaggctttttgaatattatgatggagctaaagaaatgttgtaaccattgctac
ctcattaaaccaccagataataatgaattctataataaacaggaggccttacaacactta
atccgtagtagcggaaaattaattcttcttgacaaactgttaattcgcctaagagagcga
ggcaatagagttcttattttttctcaaatggtgcggatgttagatatacttgcagaatat
ttgaagtatcgtcaattcccctttcaaagattagatggatcaataaaaggagagctgagg
aagcaagctctagatcattttaatgctgaaggatcagaggatttctgctttttgctttcc
acaagagctggaggtttaggaattaacttagcttcagctgacactgttgttatatttgat
tctgattggaatccacaaaatgatcttcaggcacaggctagagctcatcgaattgggcaa
aagaaacaggtgaacatttatcgtctagttacaaagggatcagttgaagaggatattctt
gaaagggccaaaaagaagatggttttagatcatcttgtgattcaaagaatggacacaact
gggaagacagtattacacacgggctctgctccctcaagttctactcctttcaataaagaa
gagttatcagccattttaaagtttggtgctgaggaactttttaaggagcccgagggagaa
gaacaagagccccaggaaatggatatagatgaaatcttgaagagggctgaaactcatgaa
aatgaaccaggacctttaactgtaggagatgaattactttctcaattcaaggttgccaac
ttttcaaatatggatgaggatgacattgagttggaacctgaaagaaattcaaagaattgg
gaagaaatcattcctgaagatcaaagaagacgattagaagaggaagaaagacaaaaggaa
cttgaagaaatttatatgctccccagaatgagaaactgtgcaaaacagattagtttcaat
ggaagtgaagggaggcgcagtagaagtaggagatactctggatctgatagtgattcagtc
tcagaacggaaaaggccaaagaaacgtggaagaccacgaactatccctcgggaaaatatt
aaaggatttagtgatgcagaaattcggcggtttatcaagagttacaagaaatttggtggc
cctctggaaagattagatgcaattgctcgagatgctgaattagttgataagtcagagaca
gacctcagacgactaggagaattggtacataatggttgcattaaagctttaaaggacaat
tcttcaggaacagaacgaacaggtggtagacttggaaaagtaaagggtccaacattccga
atatcaggagtacaagtgaatgccaagctagtcatctcccatgaagaagaattaataccg
ttgcacaaatccattccttcagacccagaagaaagaaagcagtatatcatcccatgccac
acgaaggcagctcattttgatatagactggggcaaagaagatgattccaatttgttaatt
ggtatctacgaatatggatatggaagctgggaaatgattaaaatggatcctgacctcagt
ctgacacacaagattcttccagatgatcctgataaaaaaccacaagcaaaacagttacag
acacgtgcggactacctcatcaaattacttagtaaagatcttgcaagaaaagaagctcag
aggctttctggtgcaggaggttcaaaaaggaggaaagtaagagctaagaagaataaagca
atgaagtctataaaaatgaaagaggaaataaagagcgattcttctcccctgccctcagaa
aagtctgatgaagatgatgataaggatgagatcacttctgtgaaacatccaaataaaaaa
gttaaaacagaaagagacagtgaagaaaaacctgagccagatgtttgtataaagaaggaa
ccagaagaaaagagggaagcgaaagaaaaggaaaataaaagagaacttaaaagggagata
aaagaaaaagaggataagaaagatataaaggaaaaagattttaaagagaaaagagaaaac
aaagtaaaagaagctatacagaaagaaaaagacataaaggaagaaaagttgagtgaatcc
aagtctgatagcaaggaaagatctaagaaatcttcagtgtcagatgctccagttcatatc
actgcaagtggtgaaccagttcccatatctgaagaatctgaagagctagatcagaagaca
ttcagcatatgtaaagaaagaatgaggcctgtcaaagcagctttgaagcaacttgatagg
cccgagaaaggcctttcagaaagagaacaactggaacatactagacagtgcttaataaaa
attggagaccatatcacggaatgtctgaaagagtatacaaatcctgaacaaatcaagcag
tggagaaaaaacctgtggatttttgtatctaagtttactgagtttgatgcaagaaaatta
cataaattatataagcatgctattaaaaaacggcaggaatctcagcaaaataatgaccag
aacagcaacttgaatactcaagtgattagaaatccagatgtggaaagattaaaagagaat
acaaatcatgatgatagcagcagggacagttactcatctgataggcacttatctcaatat
catgatcatcataaagaccgacatcagggagattcttataaaaagagtgactctaggaaa
agaccctattcttcttttagtaatggtaaagatcatcgtgattgggatcactacaagcaa
gacagcagatactatagtgatagagagaaacacagaaaactggatgatcacaggagtaga
gaccacaggtcaaatttggaaggaagtttaaaagacagaactcattctgatcatcgttct
cattcagatcatcggttgcattcagaccatcggtcaagttctgaatatacacaccataaa
tcttccagggattataggtatcactcagattggcagttggaccatagagcttccagtagt
ggctctagatcaccactagatcagaggtctccttatggctccagatctccatttgaacac
tcaattgaacacagaagtacacctgagcatacctggagtagtcggaaaacataa
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integrated database retrieval system
