Neophocaena asiaeorientalis asiaeorientalis (Yangtze finless porpoise): 112414553
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Entry
112414553 CDS
T08872
Symbol
COL1A2
Name
(RefSeq) collagen alpha-2(I) chain
KO
K06236
collagen type I alpha
Organism
nasi
Neophocaena asiaeorientalis asiaeorientalis (Yangtze finless porpoise)
Pathway
nasi04151
PI3K-Akt signaling pathway
nasi04510
Focal adhesion
nasi04512
ECM-receptor interaction
nasi04518
Integrin signaling
nasi04611
Platelet activation
nasi04820
Cytoskeleton in muscle cells
nasi04926
Relaxin signaling pathway
nasi04933
AGE-RAGE signaling pathway in diabetic complications
nasi04974
Protein digestion and absorption
nasi05146
Amoebiasis
nasi05165
Human papillomavirus infection
nasi05205
Proteoglycans in cancer
nasi05415
Diabetic cardiomyopathy
Brite
KEGG Orthology (KO) [BR:
nasi00001
]
09130 Environmental Information Processing
09132 Signal transduction
04151 PI3K-Akt signaling pathway
112414553 (COL1A2)
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
112414553 (COL1A2)
04518 Integrin signaling
112414553 (COL1A2)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
112414553 (COL1A2)
09142 Cell motility
04820 Cytoskeleton in muscle cells
112414553 (COL1A2)
09150 Organismal Systems
09151 Immune system
04611 Platelet activation
112414553 (COL1A2)
09152 Endocrine system
04926 Relaxin signaling pathway
112414553 (COL1A2)
09154 Digestive system
04974 Protein digestion and absorption
112414553 (COL1A2)
09160 Human Diseases
09161 Cancer: overview
05205 Proteoglycans in cancer
112414553 (COL1A2)
09172 Infectious disease: viral
05165 Human papillomavirus infection
112414553 (COL1A2)
09174 Infectious disease: parasitic
05146 Amoebiasis
112414553 (COL1A2)
09166 Cardiovascular disease
05415 Diabetic cardiomyopathy
112414553 (COL1A2)
09167 Endocrine and metabolic disease
04933 AGE-RAGE signaling pathway in diabetic complications
112414553 (COL1A2)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
nasi00536
]
112414553 (COL1A2)
Glycosaminoglycan binding proteins [BR:
nasi00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
112414553 (COL1A2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Collagen
COLFI
Motif
Other DBs
NCBI-GeneID:
112414553
NCBI-ProteinID:
XP_024622854
UniProt:
A0A341D7J4
LinkDB
All DBs
Position
Unknown
AA seq
1366 aa
AA seq
DB search
MLSFVDTRTLLLLAVTSCLTTCQSLQEATARKGPTGDRGPRGERGPPGPPGRDGDDGIPG
PPGPPGPPGPPGLGGNFAAQYDGKGVGIGPGPMGLMGPRGPPGASGAPGPQGFQGPPGEP
GEPGQTGPAGARGPPGPPGKAGEDGHPGKPGRPGERGVVGPQGARGFPGTPGLPGFKGIR
GHNGLDGLKGQPGAPGVKGEPGAPGENGIPGQIGARGLPGERGRVGAPGPAGARGSDGSV
GPVGPAGPLGSAGPPGFPGAPGPKGELGPVGNPGPAGPAGSRGEVGLPGVSGPVGPPGNP
GANGLHGAKGAAGLPGVAGAPGLPGPRGIPGPVGAAGATGARGLVGEPGPAGSKGESGNK
GEPGAAGPTGPPGPSGEEGKRGTTGEIGSAGPPGPPGLRGNPGSRGLPGADGRAGAMGPH
GSRGGTGPAGVRGPSGDSGRPGEPGLMGPRGFPGSPGNVGPAGKEGPMGLPGIDGRPGPI
GPAGTRGEPGNIGFPGPKGPTGDPGKNGEKGHAGLAGPRGAPGPDGNNGAQGPPGLQGVS
GGKGEQGPAGPPGFQGLPGPAGTAGEAGKAGERGIPGEFGLPGPAGPRGERGPPGESGAA
GPAGPIGSRGPSGPAGPDGNKGEPGVVGAPGTAGPSGPNGLPGERGAAGIPGGKGEKGET
GLRGDAGSHGRDGARGAPGAVGAPGPAGANGDRGEAGPAGPAGPAGPRGSPGERGEVGPA
GPNGFAGPAGAAGQPGAKGERGTKGPKGENGPTGPTGPVGAAGPAGPNGPPGPAGSRGDG
GPPGATGFPGAAGRTGPPGPSGITGPPGPPGPAGKEGLRGPRGDQGPVGRTGETGASGPP
GFVGEKGPSGEPGTAGSPGTPGPQGLLGAPGFLGLPGSRGERGLPGVAGSVGEPGPLGIA
GPTGARGPPGAVGNPGVNGAPGEAGRDGNPGNDGPPGRDGQAGHKGDRGYPGNAGPTGTV
GAPGPQGPVGPTGKHGNRGEPGPSGPVGLAGAVGPRGPSGPQGIRGDKGEPGDKGPRGLP
GLKGHNGLQGLPGLAGHHGDQGAPGTVGPAGPRGPSGPSGPSGKDGRTGHPGAVGPAGIR
GSQGSQGPSGPPGPPGPPGPPGPSGGGYDFGFEGDFYRADQPRSPPSLRPKDYEVDATLK
SLNNQIETLLTPEGSRKNPARTCRDLRLSHPEWSSGYYWVDPNQGCTMDAIKVYCDFSTG
ETCIRAQPENIPVKNWYRSSKAKKHVWVGETINGGTQFEYNVEGVTTKEMATQLAFMRLL
ANHASQNITYHCKNSIAYMDEETGNLKKAVILQGSNDVELVAEGNSRFTYTVLVDGCSKK
INEWRKTIIEYKTNKPSRLPILDIAPLDIGGADQEIRLNIGPVCFK
NT seq
4101 nt
NT seq
+upstream
nt +downstream
nt
atgctcagctttgtggatacgcggactctgttgctgcttgcagtaacttcgtgcctaaca
acatgccaatctttacaagaggcaactgcaagaaagggcccaactggagatagaggacca
cgtggagaaaggggtccgccaggcccaccaggcagagatggtgatgatggtatcccaggc
ccacctggtccacctggtcctcctggtccccctggtcttggtgggaactttgctgctcag
tatgatggaaaaggagttggaattggccctggaccaatgggtttgatgggacctagaggc
cctcctggtgcatctggagcccctggccctcaaggtttccaaggacctcctggtgagcct
ggtgagcctggtcaaactggtcctgcaggtgctcgtggtccacctggccctcctggcaag
gctggtgaggatggtcaccctggaaaacctggacggcctggtgagagaggagttgttggg
ccacagggtgctcgtggtttccctggaactcctggactccctggcttcaagggcattagg
ggtcacaatggtctggacgggttgaagggacagcctggtgctccaggtgtgaagggtgaa
cctggtgcccctggtgaaaatggaattccaggtcaaataggagctcgtgggcttcctggt
gagagaggacgtgtcggtgcccctggcccagctggtgcccgtggaagtgatggaagtgtg
ggtcctgtgggtcctgctggtcctcttgggtctgctggccctccaggcttcccaggtgct
cctggccccaagggtgaacttggacctgtcggtaaccctggtcctgctggtcccgcgggt
tcccgtggtgaagtgggtcttccaggtgtttctggccctgttggacctcctggcaaccct
ggagccaatggccttcacggtgctaagggtgctgccggccttccaggcgttgctggggct
cctggcctccctggaccccggggtattcctggccctgttggtgctgctggtgctactggt
gccagaggacttgttggtgagcctggtccagctggttccaaaggagagagtggcaacaag
ggcgagcctggtgctgctgggcccacaggtcctcctggtcccagtggcgaagaaggaaag
agaggcaccactggtgaaattggatccgctggccccccaggacctcctggtctgagggga
aatcctggttctcgtggtcttcctggagccgacggcagagctggtgccatgggccctcat
ggtagtcgtggtggaactggccctgctggtgtgcgaggtcccagtggagattctggtcgc
cctggagagcctggcctcatgggaccccgaggttttcctggttcccctggaaatgttggc
ccagctggtaaagaaggtccgatgggcctccctggtattgatggcaggcctggaccaatt
ggcccagctggaacaagaggagagcctggcaacatcggattccctggacccaaaggcccc
actggtgatcctggcaaaaatggtgaaaaaggtcatgctggtcttgccggtcctcggggt
gctccaggtcctgatggaaacaatggtgctcagggacctcctggactacagggtgtctca
ggtggaaaaggtgaacagggtcccgctggtcctccaggcttccagggtctgcctggccct
gcaggtacagctggtgaagctggcaaagcaggagaaaggggtatccctggtgaatttggt
ctccctggtcctgctggtccaagaggagagcgtggtcccccaggtgaaagtggtgctgct
ggtcctgctggtcctattggaagccgaggtccttctggacctgcagggcctgatgggaac
aagggcgaacctggtgtggttggtgctccaggcactgctggtccatctggtcctaatgga
ctcccaggagaaaggggtgctgctggcatacctggaggcaagggagaaaagggtgaaact
ggtctcagaggtgatgctggtagccacggcagagacggtgctcgtggtgctcctggtgct
gtaggtgcccctggtcctgctggagccaacggggaccggggtgaagctggtcctgctggt
cccgctggtcccgctggtcctcgtggtagccctggtgaacgtggtgaggtcggtcccgct
ggccccaatggatttgctggtcctgctggcgctgctggtcaacctggtgctaaaggagag
agaggaaccaaaggacccaagggtgaaaatggccctactggtcccacaggccccgttgga
gctgctggcccagctggtccaaatggtccccctggtcctgctggaagtcgtggtgatgga
ggcccccctggtgctacgggtttccctggtgctgctggaaggactggtcctcctggaccc
tctggtatcactggcccccctggtccccctggtcctgctggtaaagaaggacttcgtggg
cctcgtggtgaccaaggtccagttggtcgaactggagaaacaggtgcttctggcccccct
ggctttgttggtgagaagggtccctctggagagcctggtactgctggatctcctggcacc
ccaggtcctcaaggtcttcttggtgctcctggttttctgggtctcccaggctctagaggt
gaacgtggtctaccaggtgttgctggatctgtgggtgaacctggccctctcggcattgca
ggcccaactggggcccgtggtccccctggtgctgtgggtaatcctggcgtcaatggtgct
cctggtgaagctggtcgtgatggcaaccctgggaatgatggtcccccaggccgcgatggt
caagctggacacaagggggatcgtggttaccctggtaacgctggtcccactggtactgtg
ggtgcacctggtcctcaaggccctgtgggtccaactggcaaacatggaaaccgcggtgaa
cctggtccttctggtcccgttggtctggccggtgctgttggtccaagaggtcctagtggc
ccacaaggtattcgaggtgataagggagagcctggtgataaggggcccagaggtcttcct
ggcttaaagggacacaatggattgcagggtcttcctggtcttgctggtcatcatggcgat
caaggtgctcctggcactgtgggtcctgctggtcctaggggcccttctggtccttctggc
ccttctggcaaggacggtcgcactggacatcctggtgcagtcggacctgctggcattcgt
ggctctcagggtagccaaggtccttctggccctcctggtcctcctggccctcctggccct
cctggccccagtggtggtggttatgacttcggttttgaaggagacttctacagggctgac
cagcctcgctcaccaccatctctcagacccaaggattatgaagttgatgctactctgaaa
tctctcaacaaccagattgagactcttcttactccagaaggctctaggaagaacccagcg
cgcacatgccgtgacttgagactcagccacccagaatggagcagtggttactactgggtt
gaccctaaccaaggatgtactatggatgctatcaaagtatactgtgatttctctactggc
gaaacctgcatccgggctcagcctgaaaacatcccagtcaagaactggtacagaagttcc
aaggccaagaagcacgtctgggtaggagaaactatcaatggtggtacccagtttgaatat
aatgttgaaggagtaactaccaaggaaatggctacccaacttgccttcatgcgcctgctg
gccaaccatgcctctcaaaacatcacctaccattgcaagaacagcattgcatacatggat
gaggagactggcaacctgaaaaaggctgtcattctgcaaggatccaatgatgttgaactt
gttgctgagggcaacagcagattcacttacactgttcttgtagatggctgctctaaaaag
ataaatgaatggagaaagacaatcattgaatataaaacaaataagccatctcgcctgccc
atccttgatattgcacctttggacatcggtggcgctgaccaagaaatcagattgaacatt
ggcccagtctgtttcaaataa
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