Neophocaena asiaeorientalis asiaeorientalis (Yangtze finless porpoise): 112415304
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Entry
112415304 CDS
T08872
Symbol
SHANK1
Name
(RefSeq) LOW QUALITY PROTEIN: SH3 and multiple ankyrin repeat domains protein 1
KO
K15009
SH3 and multiple ankyrin repeat domains protein
Organism
nasi
Neophocaena asiaeorientalis asiaeorientalis (Yangtze finless porpoise)
Pathway
nasi04724
Glutamatergic synapse
Brite
KEGG Orthology (KO) [BR:
nasi00001
]
09150 Organismal Systems
09156 Nervous system
04724 Glutamatergic synapse
112415304 (SHANK1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ank_2
Ank
Ank_4
SAM_1
Ank_5
SH3_2
SAM_2
SH3_1
SH3_9
FERM_f0
SAM_PNT
PDZ
Motif
Other DBs
NCBI-GeneID:
112415304
NCBI-ProteinID:
XP_024623989
UniProt:
A0A341DAS5
LinkDB
All DBs
Position
Unknown
AA seq
1826 aa
AA seq
DB search
MMTHSPASSEDEERHSASECPEGGSESDSSPDGPGRGPRGTRGRGSGGPGSLASVRGLQG
RSMSVPDDAHFSMMVFRIGIPDLPQTKCLRFNPDATIWTAKQQVLCALSESLQDVLNYGL
FQPATSGRDANFLEEERLLREYPQSFEKGVPYLEFRYKTRVYKQTNLDEKQLAKLHTKTG
LKKFLEYVQLGTSDKVARLLDKGLDPNYHDSDSGETPLTLAAQTEGSVEVIRTLCLGGAH
IDFRARDGMTALHKAACARHCLALTALLDLGGSPNYKDRRGLTPLFHTAMVGGDPRCCEL
LLYNRAQLGIADENGWQEIHQACQRGHSQHLEHLLFYGAEPGAQNASGNTALHICALYNK
ETCARILLYRGADKDVKNNSGQTPFQVAVIAGNFELGELIRNHREQDVVPFQESPKYAAR
RRGPPGVGLTVPPALLRANSDTSMALPDWMVFAAPGTSSAGAPGPTSGPQGQPQPSAPST
KLSSGTLRSASSPRGARARSPSRGRHPEEAKRQPRGRPSSSGTPREGPAGGTGGSGGPGG
SLGSRGRRRKLYSAVPGRSFMAVKSYQAQAEGEISLSKGEKIKVLSIGEGGFWEGQVKGR
IGWFPSDCLEEVANRSQEAKQESRSDKAKRLFRHYTVGSYDSFDAPSLMDGIGPGSLNVL
AFPFRPFQTVLGCTVCLSAVNGQNVVKVGHRQVVNMIRQGGNTLMVKVVMVTRHPDMDEA
VHKKAPPQAKRLPPPTISLRSKSMTSELEEMVSPWKKKSEYEQQAAPVPSMEKKRTVYQM
ALNKLDEILAAAQQTISASESPGPGGLASLGKHRPKGFFATESSFDPHHRSQPSYERPSY
LPPGPGLMLRQKSIGAAEDERPYLAPPAMKFSRSLSVPGSEDIPPPPTTSPPEPPYSTPP
APSSSGRLTPSPRGVPFNPGSGVPHPASSPSSFDGPCPPDSRVGSREKSLYHGGALPPAH
HPPPPHQPHAPLPQPHHHKLPPRAASAAMYVPARSGRGRKGPLVKQTKVEGEPQKGGASP
LGLALAARERALKESAEGGGAPQPPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXA
PPPDPARRELGYRAGLGSQEKSLPASPPAARRSLLHRLPPTAPGVGPLLLQLGSEPPAPH
PGVSKAWRSAAPEEPERLPLHVRFLENCQPRAGGAGGRVPPSEDGPGIPPPSPRRSVPPS
PTSPRGSDENGLPLLVLPPPAPSVDVEDGEFLFVEPLPPPLEFSNSFEKPESPLTPGPPH
PLPDPPTAASPAPPAPPPAVAAAPPTLDSTASSLTSYDSEVATLTQAGPAAAGDAPPPGP
AAPAAPPPPAPQPGPDPPAGTDSGIEEVDSRSSSDHPLETISSASTLSSLSAEGGAGGGV
ASVASGPELLDTYVAYLDGQAFGGSGPPGPPYPPQLMTPSKLRGRALGASGGLRPGPGGG
LRDPVTPTSPTVSVTGAGTDGLLALSGCSGPSTAGVAGGPGAVEPEGPPVPLPSASSLPR
KLLPWEEGPGPPPPPLPGPLAQPQASALATVKASIISELSSKLQQFGGSSAAGGALPWAR
GGGGGSGDGHHGGASYVPERTSSLQRQRXAGDAQPSLLSKPVSSLFQNWSKAPLPPLPTG
GGGSASAAAAPGATSPSATSSSTPARHLQGVEFEMRPPLLRRAPSPSLLPASEHKVSPAP
RPSSLPILPAGPLYPGLFDIRGSPTGGAGGSADPFAPVFVPPHPGMSGGLGGALSGASRS
LSPTRLLSLPPDKPFSAKPLGFWTKFDVADWLEWLGLAEHRARFLDHEIDGSHLPALTKE
DYVDLGVTRVGHRMNIDRALKFFLER
NT seq
5481 nt
NT seq
+upstream
nt +downstream
nt
atgatgacccacagccccgcgtcaagcgaggacgaggaacgccacagtgccagcgagtgt
cccgaggggggctcagagtccgacagctccccagacgggcccgggagaggcccccggggg
acccggggccggggcagcgggggacctggtagcctggcctcggttcgaggcctccagggc
cgctccatgtctgtcccagacgacgcccacttcagcatgatggtctttaggattggcatc
cctgacctgccccagacaaaatgcctgcgcttcaacccagatgccaccatctggacggcc
aagcagcaggtgctctgtgccctgagcgagagcctgcaggatgtcctcaactatggcctg
ttccagccggccacgtcgggccgcgatgccaacttcctggaggaggaacggctgctgcgg
gagtacccccagtcctttgagaagggggtgccctacctggagttccgatacaagacccga
gtttacaaacagaccaacctggatgagaagcagctggccaagttgcacacgaagacgggg
ttgaagaagttcctggagtacgtacagctcgggacatccgataaggtggcacggctgctg
gacaaggggctggaccccaattatcatgactcggattcaggagagacccccctgacgctg
gctgcccagacagaaggctctgtagaggtgattcgaaccctgtgcctgggcggggcccac
atcgacttccgggcccgggatggcatgacagcgctacacaaggccgcgtgtgcccgtcac
tgcctcgctctcacggcgctcctggatcttgggggttcccccaactacaaggaccgccgg
gggctgactcctctgttccatacggctatggtggggggcgacccccgctgctgtgagcta
ctcctgtacaacagggcccagctgggcatagctgatgagaacggctggcaggagatccac
caggcctgccagaggggccattctcagcacctggaacacctgctcttctatggggctgag
cctggagcccagaacgcctcggggaacacggccctgcacatctgcgccctctacaataag
gagacgtgtgctaggatactcctctaccgaggagctgacaaggatgtgaagaataacagc
ggccagacccccttccaggtggcagtgattgctgggaattttgaacttggggagctgatc
cgaaaccatcgagaacaggacgtggtgcccttccaggagtcccccaagtacgcagcccgg
cgacggggaccccccggcgtggggctgacggtgccccccgcgctgctgcgggccaacagc
gataccagcatggccctgcctgactggatggtgttcgccgccccggggacctcgtccgcc
ggggcccccggccctacctcagggcctcagggccagccgcagccctcggcccccagcacc
aagctcagcagtgggaccctccgaagtgccagcagcccccggggcgcccgggcccgctca
ccatcccgagggaggcaccccgaggaggccaagaggcagccccgtggacggcccagctcc
agcgggacaccccgggaagggccagctgggggcaccgggggctccgggggccccgggggc
tccctgggcagccgcgggagacgccggaagctctactcagcggtccccggacgttccttc
atggctgtgaagtcctaccaggcccaagccgagggggagatctccctaagcaagggcgag
aagatcaaagtgcttagcatcggggaaggaggcttctgggaaggccaggtcaaaggtcgc
atcggctggttcccctctgactgcctggaagaggtggccaaccgctcccaggaggcaaag
caagaaagccgaagtgacaaggcaaagagactattccggcattataccgtgggctcctac
gacagctttgatgccccaagcttgatggatgggattggcccagggagtctgaacgtcctg
gccttccctttccggcccttccagactgtgttggggtgcactgtgtgtctgtctgcggtg
aacgggcagaacgtggtgaaggtcggccaccgacaggtggtgaacatgatccgccaaggg
ggtaacacgctgatggtcaaggtggtgatggtcacccggcacccggacatggatgaggct
gttcataagaaagcaccgccgcaggctaagcggctcccgcctccaaccatctccctgcgt
tccaagtctatgacctcagagctggaggagatggtctcgccctggaagaagaagagtgag
tacgagcagcaagctgcgccggtgcccagcatggagaaaaagcggaccgtgtatcagatg
gctctcaacaaactggatgaaattttggcggcagctcagcagaccatcagtgcaagtgag
agtcctgggcctggtggcctcgcgtccctgggcaaacaccgacccaaaggcttctttgcc
actgagtcgagctttgatccccaccaccgctcccagccaagttatgaacgtccttcctac
ctgcctccaggacctgggcttatgctccggcaaaagtctattggggctgcagaagatgag
agaccctacctagcacccccagccatgaagttcagccgcagcctgtctgtgcctggttcg
gaggacatcccgccgccgcccaccacgtccccaccagagcctccctacagcacacctcct
gccccctcttcctccggccgcctcactccctctccccggggagtgcccttcaaccccggc
tcaggtgtcccccaccccgcctcgtcaccgtcgtccttcgatgggccctgccctcctgac
agccgtgtagggagccgtgagaagagcttgtaccacggcggggccctgccccctgcgcac
cacccgccacccccacaccagccgcacgctccgctcccccagccacaccaccacaagctg
cctccccgggcggccagcgcggccatgtacgtgccggcccgttcgggccgcgggcgcaag
ggcccgctcgtcaagcagaccaaagtcgaaggcgagccccagaagggcggcgcctccccg
ctcgggctggccctggccgcccgagagcgggcgctgaaggagtccgcggagggcggtggg
gccccccagccccctnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn
nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnngcc
cccccgccggacccggcgcgccgggagctgggctaccgggccgggctgggcagccaggag
aagtcccttccggccagcccgccagctgcccgacgctccctgctgcaccgcctgccgccc
accgcccccggggtcgggcccctcctgctgcagctggggtccgagcccccggccccgcac
cccggggtgagcaaagcctggaggtccgcagccccggaggagcccgagcggctgcccctc
cacgtgcggttcctcgagaactgccagccccgggccggtggggcggggggcagggtgccc
ccctcggaggacgggccggggatcccgccgcccagccctcgccggtccgtgcccccctcg
ccgacctccccgcggggcagtgacgagaacgggctccccctgctggtcctgccgcccccc
gccccgtcggtggacgtggaagacggcgaatttctctttgtggaaccgctgcccccgccc
ctggagttctccaacagctttgagaagcccgagtcgcccctcacgccggggccgccccac
ccgctgccggacccacccaccgcggccagcccagcgccccctgcgccgccccctgccgtg
gccgccgcccctcccacgctggactccaccgcatccagcctgacttcctatgacagcgag
gtggccacgctgacccaggcgggccccgcagctgctggggacgcgcctccgccgggccca
gcagccccagccgccccgcctccgcctgccccacagcctggcccagaccctccagctggc
acagattccggtatcgaggaggtggacagtcggagcagcagtgaccacccgctggagacc
atcagcagcgcgtccacgctgagcagcctgtctgccgaaggcggggctggcggcggggtg
gccagtgtggccagtgggccggagcttctggacacgtatgtggcctacctggacggccag
gccttcgggggcagcggtcctcctggcccaccatacccgccgcagctcatgactccctct
aagctccggggccgggcgcttggggccagcggaggcctgcggcctggccccggtggggga
ctccgagaccctgtcactcccaccagccccaccgtctcggtgacgggggctggaaccgat
gggctgctggccctgagtggttgctcaggaccttcaacggcaggtgtggccggcggtcca
ggggctgtagagccagaaggcccaccagtgcccttgccatccgcctcctccctgcctcgg
aagctgctgccctgggaggagggcccgggtccaccaccaccccccctgcctgggccctta
gcccagcctcaggcctcagccttggccacagtaaaagccagcatcatcagtgaactcagc
tccaagcttcagcagtttgggggctcctcggcagctggtggcgctctgccctgggcccgg
ggaggcggcgggggaagcggggacggccaccacgggggagccagctacgtcccagagagg
acttcctccctgcagcggcagaggtgagccggggacgcccagccctcgcttctctccaaa
cctgtcagcagcctgtttcagaactggtccaaagcgcctctgccgcccctccccacagga
ggcgggggctccgcttcggccgctgcggccccgggggccacctcgccgtcagccacctcc
tcctccacgcccgcccgccacctccagggcgtggagttcgagatgcggccacctttgctc
cgccgggccccgagcccgtccctgctgcccgcctcggagcacaaggtcagccccgcgccc
cggccctcctccctacccatcctgcctgctggaccgctctacccgggcctctttgacatc
cgcggctcccccaccggaggggcaggaggctcggctgaccccttcgcccctgtctttgtg
ccaccgcaccccgggatgtccgggggtctcggtggggccttgtcaggggcctcgcgctcc
ctctcaccgacccgcctgctctccctgcccccggacaagcccttcagcgctaaacctctg
gggttctggaccaagttcgacgtggctgattggcttgagtggctgggcttggctgagcac
cgagcccgattcctggaccacgagatcgatggctcccacctgcccgccttgaccaaggag
gactacgtcgatttgggggtgaccagggtgggccaccgcatgaacatcgaccgggctctc
aaatttttcctggagaggtga
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integrated database retrieval system
