Neophocaena asiaeorientalis asiaeorientalis (Yangtze finless porpoise): 112415785
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Entry
112415785 CDS
T08872
Symbol
SCN11A
Name
(RefSeq) sodium channel protein type 11 subunit alpha isoform X1
KO
K04843
voltage-gated sodium channel type XI alpha
Organism
nasi
Neophocaena asiaeorientalis asiaeorientalis (Yangtze finless porpoise)
Brite
KEGG Orthology (KO) [BR:
nasi00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
nasi04040
]
112415785 (SCN11A)
Ion channels [BR:
nasi04040
]
Voltage-gated cation channels
Sodium channel, voltage-gated (Nav)
112415785 (SCN11A)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ion_trans
Na_trans_assoc
PKD_channel
IQ_SCN5A_C
GPHH
Motif
Other DBs
NCBI-GeneID:
112415785
NCBI-ProteinID:
XP_024624717
UniProt:
A0A341DEB0
LinkDB
All DBs
Position
Unknown
AA seq
1609 aa
AA seq
DB search
MFIICTVIINCVFMAMTRGKDSVNVDTESAEFVSYSPYIKDSSISLSSLRTFRVFRALKA
ISVISGLKVIVGALLRSVKRLVDVMILTLFCLSIFTLVGQQLFMGNLNQKCVRKDCGSDY
KDDCFEKKDSTEFRICGTWMESGACSEQFECKHTNKNPDYNYTNFDSFGWSFLAVFRLMT
QDSWEKLYQQTLRTSGLYSVFFFVVVIFLGSFYLINLTLAVVTMAYEEQNKNVAAETEAK
EKMFQEAQQLLKEEKEALVAMGIDRSSLNSLEASSFSLKKRKLFGNKKGKSFFLRKSGKD
QVPGLDSDEDSSKKPHLLEQTKRLSQNLSVDHCDEHRDPFQRQRALSAVSILTITVHEQE
KSQEPCLPCGENLASKYLVWDCSPRWLCIKKALRTMMTDPFTELAITICIIINTLFLAME
HYKMDQSFENMLYTGNLVFTGIFMAEMCLKIIALDPYHYFRGGWNIFDSIVALLSFAEVI
INSMCPGKQSCMSLRSLRVLRVFKLAKSWPTLNTLLKIIGHSVGALGNLTVVLAVVVFIF
SVVGMQLFGSKFNCIKSNSKSHDPAVPCLRRWHMGDFYHSFLVVFRILCGEWIENMWECM
QEANQALCVIVFLLIMVIGKLVVLNLFIALLLNSFSNEERDGHLEGEVRKTKVQLALDRF
CRAFCFVIYTLEHFCTKWCRRQHLPKEKEVTEGPEAESKGVIPLVIEMRKGPETWEEFGV
LTSAPKTLSVGHDRTWLAPLAEEEDDAESPGEDKAQPITQPEPGKQCQASELHQKTKEPT
SPGAQIVEMDIFSEGDPYLSVQNPRKKSDATSVLSECSTTGPQDPFRRVLEMVPKKEPER
CLPKGLNYCSPCCTMDKRKSPWIIWWNLRKTCYQIVKHSWFESFIIFVILLSSGALVFED
IYLGTQPKIQTILNCTDSIFTYIFILEMGLKWVAFGFRKYFTSAWCWLDFIIVIVSVTSL
IDLKVLKSFRILRALRPLRALSQFEGMKVVVNALIGAIPAILNVLLVCLIFWLIFCILGV
SLFSGKFGRCVNVTDGNSVINYNIVANRSQCESGNFSWFTLKVNFDNVGMAYLALLQVAT
FKGWMDIMYAAVDSRGEGQQPRFEENSLMYVYFVVFIIFGSFFTLNLFIGVIIDNFNQQQ
KKLGGQDIFLTEEQKKYYNAMKKLGSKKPQRPIPRPLNKCQGFVFDLVTHQVFDIVIIIL
IFLNMVSMMAESYGQSKAMELFLERLNLAFVVVFTTECLIKIFALRQYYFTSGWNLFDCV
IVVISIVSTVVSALKTQAHIPFPPTFFRIVRLARIGRILRLVRAARGIRTLLFALMMSLP
SLFNIGLLLFLVMFIYAIFGMNCFCKVKEESGIDDIFNFKTFKGSMLCLFQITTSAGWDA
LLSPMLQSKDSCNPKSENCHLSAIAIAYFVSYIIISFLIVVNMYIAVILENFNIATEESE
DPLGEDDFEIFYEVWEKFDPEATQFIEYSALSDFADALPEPLRVAKPNKYQFLVMDLPMV
SGDRLHCLDILFAFTARVLGESSGLDSMKAVMEEKFMEANPFKKLYEPIVTTTKRKEEER
CAAVIQKAFRKYMTKTKCTLEDRPHSPLQTLCNGDLSGSGVAECKVHYD
NT seq
4830 nt
NT seq
+upstream
nt +downstream
nt
atgttcatcatctgcaccgtcatcatcaactgcgtgttcatggccatgactcgtgggaag
gacagcgttaacgtagatactgagagtgcggagtttgtatcatattcaccatatatcaag
gacagcagcatcagtctgtcatccctgcgtaccttccgagtgttcagagctttgaaagca
atttcagtaatttcaggtctgaaggtcattgttggggccttgctgcgctctgtgaagagg
cttgtcgatgtgatgatcctgactctcttttgcctcagcatcttcaccctggtaggtcag
cagctcttcatgggaaatctgaaccagaaatgtgtgaggaaagactgtggctctgactat
aaagacgattgctttgaaaagaaagattccactgaattcagaatatgtggcacatggatg
gagagcggggcttgttctgaacaatttgaatgcaaacataccaataaaaatcctgactat
aattacacgaattttgacagctttggctggtcttttcttgccgtgttccggcttatgacc
caagattcctgggagaagctttatcaacagactttgcgcacctcagggctctactcagtc
ttcttctttgtggtggtcatcttcctgggctctttctacttgattaacttaaccctggct
gttgtcaccatggcttacgaggaacagaacaagaatgtagctgctgagacagaagccaag
gagaagatgttccaggaagcccagcagctgttaaaggaggagaaggaggctctggttgcc
atgggtattgacagaagttcacttaattcccttgaagcatcatctttttccctgaagaag
agaaagctatttggtaataagaaaggaaaatccttctttttgagaaagtctgggaaagac
caggttccaggattagattctgatgaagattcttcaaaaaagccacacctacttgaacaa
accaaacgactgtcccagaatctgtcagtggaccactgtgatgagcacagagaccccttc
caaaggcagagagcgctgagcgctgtgagcatcctcaccatcaccgtgcacgaacaagaa
aaatcacaggaaccttgcctcccatgtggggaaaacctggcatccaaatacctcgtgtgg
gactgtagcccccggtggctgtgcattaagaaggccctgagaaccatgatgactgacccc
tttactgagctggccatcaccatctgcatcataatcaacactctcttcttggccatggag
cattacaaaatggaccagagttttgagaacatgttgtacacagggaatttggttttcact
ggcattttcatggctgaaatgtgcctaaaaatcattgcgctggatccctaccactacttt
cgtggaggctggaacatttttgacagcattgttgctcttctgagttttgcagaggtgata
ataaacagtatgtgtccaggaaaacaaagttgtatgtcacttcgttccttaagagtgctg
agggtcttcaagttagccaaatcctggccaactttaaacacactgcttaagataattggc
cattccgttggagcccttggaaacctgactgtggtcttggccgttgtggtctttattttc
tcagtagttggcatgcagctttttggctctaaattcaattgcataaagagtaattcaaag
tcccatgaccctgcagtcccatgtttacgacgctggcacatgggggatttctaccactcc
tttctggtggtattccgcatcctctgtggggaatggatcgaaaacatgtgggaatgtatg
caagaagctaaccaagcactgtgcgttattgtgtttctgttgatcatggtgataggaaaa
ctcgtggtactcaacctcttcattgccttgctgctcaattccttcagcaatgaggagaga
gatggacacttggaaggagaggtcaggaaaaccaaagtccagttagccctggaccggttc
tgccgggcgttttgttttgtcatatatactcttgagcatttttgtaccaagtggtgcagg
agacaacatttaccaaaggaaaaagaggtgacagaaggccctgaggcagagagcaaaggt
gtcattcccctggtcatagagatgagaaagggcccagagacctgggaggagtttggtgta
ctgacttccgcaccaaagaccttgagtgtcgggcatgatcggacttggttggccccacta
gcagaggaagaagatgatgctgaatcccctggtgaagataaggcacagcctatcacacaa
cctgagcctggaaaacagtgtcaggccagtgaactccatcagaagaccaaggagcccacc
agtccaggagctcagattgtggaaatggacatattctctgaaggtgatccttatctgtcg
gtacagaatccccgaaagaagtctgatgctacgagtgtgctctcagaatgtagcaccact
ggtccacaggatccctttaggcgggtacttgaaatggttcccaaaaaggaaccagagaga
tgtttgcccaaaggcctgaattactgttctccatgctgtactatggacaagaggaagtcc
ccctggatcatttggtggaacctgcggaaaacctgctaccaaatagtgaaacacagctgg
tttgagagctttattatctttgtgattctgctgagcagtggggcactggtatttgaagat
atttaccttggtacacaacccaaaatccaaacaatacttaattgtactgacagtattttc
acatacatttttatcttggagatgggtctgaaatgggtggcctttggatttaggaagtat
ttcaccagtgcctggtgctggctcgatttcatcattgtgattgtctctgtgaccagtctc
atcgacttaaaggtcttgaagtccttccggattctgcgagcgctgaggcctctgcgagcg
ctgtcccagtttgaaggaatgaaggtggtagttaacgctctcataggtgccatacctgcc
atcctgaatgttttgcttgtctgcctcattttctggctcatattttgtatcctgggagta
agtttgttttctggaaaatttggaagatgcgttaacgtaacagatggaaactcagttata
aattacaacattgttgcaaaccggagtcaatgtgaaagtggaaatttctcctggttcacc
ctgaaagtcaactttgacaatgtgggaatggcttacctcgcgctgctgcaagtggcaaca
tttaagggctggatggatattatgtatgcagctgttgattccagaggggaaggacaacag
ccaaggtttgaggagaactcattaatgtatgtttacttcgtagtttttatcatctttggc
tcattcttcactctgaatctctttattggtgttattattgacaacttcaaccaacagcag
aaaaagttaggtggccaagacatctttctgacagaagaacagaagaaatactataatgca
atgaaaaaattaggatccaaaaaacctcaaaggcccatcccaaggcctctgaacaaatgc
cagggttttgtttttgacctagttacacaccaggtctttgacatcgtcatcatcatcctc
attttcctcaacatggttagcatgatggctgaatcatatggccagtccaaagccatggaa
ctcttccttgagcgtctcaacctggcctttgtggtcgtctttacaactgagtgtctcatc
aaaatctttgctttgaggcaatactacttcaccagtggctggaatttatttgattgtgtg
atcgtggtcatttctattgttagtacagttgtttctgccttgaaaacccaggcacacatt
cctttccctccaacattcttcagaattgtccgcttggctcggattggccgaatcctgaga
cttgttcgggcagcacgaggaatcagaactctccttttcgcgctaatgatgtctcttccc
tctctattcaacattggtcttctactctttctggttatgtttatttatgccatttttggt
atgaactgtttttgcaaagtgaaggaagagtctggaattgatgacatattcaacttcaaa
actttcaaaggcagcatgctctgcctcttccagataaccacgtcagcaggctgggatgcc
ctcctcagccccatgttgcaatcaaaagactcatgtaaccccaagtcagagaactgtcac
ctctctgccatagccatagcctacttcgtcagttatatcatcatctcctttctcatcgtg
gtcaacatgtatattgctgtgattttagaaaacttcaatatagccactgaagaaagtgag
gaccctttgggtgaagacgactttgaaatattctacgaagtctgggaaaagtttgacccg
gaagcaacacaatttatcgaatattctgctctttctgactttgctgatgcccttcctgag
cctctgcgtgtggcaaagccaaataaataccaatttttagtcatggacttgcccatggtg
agcggagatcgccttcattgcctggatattctgttcgctttcaccgctagggtacttggt
gagtccagtggcctggatagcatgaaagcagtgatggaggagaagttcatggaagccaac
cctttcaagaagttatatgaacccatagtcaccaccaccaagaggaaggaagaggaaaga
tgtgctgctgttattcaaaaggcctttcgaaagtacatgacgaagaccaagtgtaccttg
gaagacaggcctcattcacccctccagacactctgcaatggagacttgtccggctctggg
gtggccgagtgcaaggtccactatgactga
DBGET
integrated database retrieval system
