Neophocaena asiaeorientalis asiaeorientalis (Yangtze finless porpoise): 112415878
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Entry
112415878 CDS
T08872
Symbol
DHX36
Name
(RefSeq) ATP-dependent RNA helicase DHX36
KO
K14442
ATP-dependent RNA helicase DHX36 [EC:
5.6.2.6
]
Organism
nasi
Neophocaena asiaeorientalis asiaeorientalis (Yangtze finless porpoise)
Pathway
nasi03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
nasi00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
112415878 (DHX36)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
nasi03019
]
112415878 (DHX36)
03012 Translation factors [BR:
nasi03012
]
112415878 (DHX36)
Enzymes [BR:
nasi01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
112415878 (DHX36)
Messenger RNA biogenesis [BR:
nasi03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
112415878 (DHX36)
Translation factors [BR:
nasi03012
]
Eukaryotic type
Initiation factors
Initiation associated factors
112415878 (DHX36)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
OB_NTP_bind
DEAD
HA2_C
Helicase_C
HA2_N
AAA_22
AAA_19
PhoH
nSTAND3
ATPase
AAA_34
DUF6782
NPHP3_N
RsgA_GTPase
Motif
Other DBs
NCBI-GeneID:
112415878
NCBI-ProteinID:
XP_024624833
UniProt:
A0A341DCK4
LinkDB
All DBs
Position
Unknown
AA seq
1015 aa
AA seq
DB search
MSYDYHQNWGRDGGGRDGGSRSSGGGYGGSYGGGHGGNRGSGGGGGGGGGGGGGRGGRGR
HPGHLKGREIGLWYAKKQGQKNKEAERQERAVVHMDERREEQIVQLLHSVQAKNDKDSEA
QISWFAPEDHRYGTDAPAENKPNSVKKVEDQEKKLINQEKRPFRIRDKYIDRDSEYLLQE
NEPDVTLDQQLLEDLQKKKTDLRYIEMQHFREKLPSYGMQKELVNMIDNHQVTVVSGETG
CGKTTQVTQFILDNYIERGKGSACRIVCTQPRRISAISVAERVAAERAESCGNGNSTGYQ
IRLQSRLPRKQGSILYCTTGIILQWLQSDPHLSSVSHIVLDEIHERNLQSDVLMTVVKDL
LNYRPDLKIVLMSATLNAEKFSEYFGNCPMIHIPGFTFPVVEYLLEDIIEKTRYVPEQKE
HRSQFKRGFMQGHVNRQEKEEKEAIYKERWPGYVRELRKRYSPSTIDVIGMMDDDKVDLN
LIAALIRYIVLEEEDGAILVFLPGWDNISTLHDLLMSQVMFKSDRFLIIPLHSLMPTVNQ
TQVFKRTPPGVRKIVIATNIAETSITIDDVVYVIDGGKIKETHFDTQNNISTMSAEWVSK
ANAKQRKGRAGRVQPGHCYHLYNGLRASLLDDYQLPEILRTPLEELCLQIKILRLGGIAY
FLSRLMDPPSNEAVLLSIKHLMELNALDKQEELTPLGVHLARLPVEPHIGKMILFGALFC
CLDPVLTIAASLSFRDPFVIPLGKEKVADARRKELAKDTKSDHLTVVNAFEGWEEARQRG
FRYEKDYCWEYFLSSNTLQMLHNMKGQFAEHLLGAGFVSSRNPKDPKSNINSDNEKIIKA
VICAGLYPKVAKIRLNLGKKRKMVKVYTKTDGLVAIHPKSVNVEQTEFHYNWLIYHLKMR
TSSIYLYDCTEVSPYCLLFFGGDISIQKDNDQETIAVDEWIIFQSPARIAHLVKELRKEL
DILLQEKIESPHPVDWKDTKSRDCAVLSAIIDLLKTQEKATPRNLPPRFQDGYYS
NT seq
3048 nt
NT seq
+upstream
nt +downstream
nt
atgagctatgactaccatcagaactggggccgcgatggcgggggccgcgatggcgggtcc
cgcagctccggcgggggttacggaggaagctatggagggggccacggagggaatcgaggc
tccggaggtggcggcggcggcggcggcggaggagggggtggtcgaggcggccgaggccga
catcccgggcacctgaaaggccgcgaaatcggcttgtggtacgcgaagaaacaaggccag
aagaacaaggaagcggagaggcaggagagagctgtggtacatatggatgaacgtcgagaa
gaacaaattgtgcagctgctgcattctgtgcaggctaagaatgataaagattcggaagca
cagatatcctggtttgctcctgaagatcacagatatgggactgatgctcctgctgagaac
aaaccaaactcagtaaagaaagttgaggatcaggaaaaaaaattgataaatcaagaaaag
aggccatttagaatcagggacaaatatattgaccgcgattctgaatatctcttgcaagaa
aatgaaccagatgtaactttagaccaacaattattggaagatttacaaaagaaaaaaact
gaccttcggtatattgaaatgcagcatttcagggaaaagctgccttcatatggaatgcaa
aaggaattggtaaatatgatcgataaccatcaggtaacagtagtaagtggtgaaactggt
tgtggaaaaaccactcaagttactcagttcattttggataactacattgaaagaggaaaa
ggatctgcatgcaggatagtttgtactcagccaagaagaattagtgccatttcagttgca
gagagagtggctgcagaaagggcagaatcttgtggcaatggtaatagtaccggataccaa
attcgtctccagagtcggttgccaaggaaacagggttctatcttatattgtacgacagga
attatccttcagtggcttcagtcagacccgcatttgtccagtgttagtcatatcgtgctt
gatgaaatccatgagagaaatctacagtcagatgttttaatgactgttgttaaagatctt
ctcaattatcgacctgacctgaaaatagttttgatgagtgcaacattgaatgctgagaaa
ttttcagaatattttggtaactgtccaatgatacatatacctggttttacttttccggtt
gtggagtatcttttggaagatataattgaaaaaacaagatatgttccagaacaaaaagaa
cacagatcccagtttaagaggggtttcatgcaagggcatgtaaatagacaagaaaaagaa
gaaaaagaagcaatctataaagaacgctggccaggttatgtaagggaattgcgaaaaagg
tattctccaagcactatagatgttataggaatgatggatgatgataaagttgatctgaat
ttgattgctgcccttattcgatacattgttttggaagaagaggatggtgcaatattggtc
tttctaccaggttgggacaatatcagtactttacatgatctcttgatgtcacaagtgatg
tttaaatcagacaggtttcttattatacccttacattcactgatgcctacagttaaccag
acacaggtatttaaaagaacccctcctggtgttcggaaaatagtaattgctaccaacatt
gcagagactagcattaccatagatgatgtagtttatgtaatagatggaggaaaaataaag
gagacacactttgacacacagaacaacatcagtacaatgtctgctgagtgggttagtaaa
gctaatgctaaacaaaggaaaggtcgagctggaagagttcaacctggtcattgctatcat
ctgtataatggtcttagagcaagccttctagatgactatcaactgccagaaattttgaga
acgcctttggaagaactttgtttacaaataaagattttaaggctaggtggaattgcttac
tttctgagtaggctaatggatccaccatcgaatgaagcagtgttactttccataaaacac
ctgatggaactgaacgctttggataaacaagaagaattgacacctcttggagtccactta
gcacgattaccagttgagccacacattggaaaaatgattctttttggagctctgttctgt
tgcctcgacccggtgctcaccattgctgctagtcttagcttcagagatccctttgtgatt
ccactgggaaaagaaaaggtcgcagatgcaagaagaaaggaattggcaaaggatactaaa
agtgatcacctgacagttgtgaatgcatttgagggctgggaagaagctagacaacgtggt
ttcagatatgaaaaagactattgctgggaatattttctgtcttcaaacacactgcagatg
ctgcataacatgaaagggcagtttgctgagcatcttcttggagctggatttgtaagcagt
agaaatcctaaagatccaaaatctaatataaattcagataatgagaagataattaaagct
gtcatctgtgctggtttatatcccaaagttgctaaaatccgactaaatttgggtaaaaaa
agaaaaatggtgaaagtttacacaaaaactgatggactagttgctattcatcccaaatcc
gttaatgtggagcaaacagaatttcattacaactggcttatctatcacctgaagatgaga
acaagtagtatatacttgtatgactgcacagaagtttctccatactgtctcttgttcttt
ggaggtgatatttccattcagaaggataatgatcaggaaactattgctgtagatgaatgg
attatctttcagtctccagcaagaattgcccatcttgttaaggaattacgaaaggaacta
gatatccttctgcaagagaagattgaaagtccccatcctgtagactggaaggacactaaa
tccagagactgtgcagtactctcagctattatagacttgctcaaaacacaggaaaaagca
actcccaggaacttgccaccacgatttcaggatggatattacagctga
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