Natrinema sp. J7-2: NJ7G_0061
Help
Entry
NJ7G_0061 CDS
T02184
Name
(GenBank) tRNA intron endonuclease
KO
K01170
tRNA-intron endonuclease, archaea type [EC:
4.6.1.16
]
Organism
nat
Natrinema sp. J7-2
Brite
KEGG Orthology (KO) [BR:
nat00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
nat03016
]
NJ7G_0061
Enzymes [BR:
nat01000
]
4. Lyases
4.6 Phosphorus-oxygen lyases
4.6.1 Phosphorus-oxygen lyases (only sub-subclass identified to date)
4.6.1.16 tRNA-intron lyase
NJ7G_0061
Transfer RNA biogenesis [BR:
nat03016
]
Prokaryotic type
tRNA spricing factors
tRNA splicing endonucleases
NJ7G_0061
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_int_endo
tRNA_int_endo_N
Motif
Other DBs
NCBI-ProteinID:
AFO55315
LinkDB
All DBs
Position
60980..62056
Genome browser
AA seq
358 aa
AA seq
DB search
MSLEGRFDADEGVVRVGGDARQRYHDSRGYGYPLEGNEIALAPVEAAHLLYRGDLEAVVN
TASGDRLGFRAFIAREPGDDFGVRFLVYADLRSRGFYLSPASEPWVSDPPGGEADFAVFP
RGKGPGDGEIAYALRIIGERTDIPAAELREGVLAVVDEESEITYFEVDSRDPTGTSDADT
SLPEGCAADLLADRVVVWEPPLGLYERTFYGQPLEGREYDEPTLQCSLLEAAYLAERGAI
DLEPGTVRERGREVEGERFDRRLRVYTALRERGVVPKTGYKFGADFRTYADVESVENLGH
SELLVRVHPADYVFEPRDLALDVRLAHGVRKTMVFALVADGAAGTDGIEWWSLERLTP
NT seq
1077 nt
NT seq
+upstream
nt +downstream
nt
atgtcactcgagggacggttcgacgcggacgagggagtcgtccgcgtaggcggcgacgca
cgccagcgatatcacgactcacgggggtacggctacccgctcgagggaaacgaaatcgcc
ctcgcacccgtggaagcggcccacctgctctaccggggggacctcgaggcagtcgtgaat
actgcgagcggcgaccgactcggattcagggcgttcatcgcccgcgaacccggcgacgat
ttcggcgttcggtttctcgtctacgcggacctccgatcgcgcgggttttatctctccccc
gcgtcggagccgtgggtgtccgatccgcccggcggcgaagccgacttcgcggtgttcccg
cgtgggaaggggcccggcgatggcgaaatcgcctacgccttgcggattatcggcgagcga
acggatattcccgccgccgagctccgggaaggcgtgttggccgtcgtcgacgaggagagc
gagatcacctatttcgaggtcgacagccgtgacccgaccggcacgtcggacgccgacacg
tcgctgccggaggggtgtgcggccgacctgctcgccgaccgggtcgtggtctgggagccg
ccgctcggcctctacgagcgaacgttctacggccagccgctcgagggccgggagtacgac
gagccgacgctgcagtgttccctgctcgaggcggcctacctcgccgaacggggtgcgatc
gacctcgagcccgggacggtccgcgagcgcggccgcgaggtcgagggtgagcgcttcgac
cggcggctgcgcgtctacacggcgctgcgggagcgtggcgtcgtccccaagacggggtac
aagttcggtgcggacttccggacctacgccgacgtcgaatccgtcgagaacctcggccac
tccgagttgctcgttcgcgtccatccggccgactacgtcttcgaaccgcgggatctggcg
cttgacgtacggctcgctcacggcgtccggaaaacgatggtgttcgcgctggtagccgac
ggagccgcggggacggacggaatcgagtggtggtcgctcgagcggctgacgccctga
DBGET
integrated database retrieval system
