Natrinema sp. J7-2: NJ7G_0245
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Entry
NJ7G_0245 CDS
T02184
Name
(GenBank) DEAD/DEAH box helicase domain protein
KO
K03725
putative ATP-dependent RNA helicase [EC:5.6.2.-]
Organism
nat
Natrinema sp. J7-2
Brite
KEGG Orthology (KO) [BR:
nat00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
nat03019
]
NJ7G_0245
Messenger RNA biogenesis [BR:
nat03019
]
Prokaryotic type
Archeal mRNA degradation factors
Exosome components
Others
NJ7G_0245
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_19
DEXQc_Suv3
SNF2-rel_dom
Motif
Other DBs
NCBI-ProteinID:
AFO55500
UniProt:
I7BRX5
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Position
236142..238325
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AA seq
727 aa
AA seq
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MSPIRPTVSIAAADETAASGRDVSAQSEPLKYRPIILVVVSKQVQQVETIFCHETGDDYL
VVVERDGKRLFRAKLGLSETSAGPRPAKFRLKEGSSEEPRQPDEFVELARRATRLRISEQ
TSAEGRRDLREMFAGYQLEDKLKTVRTCRYCAGAGRYSPITTETAVKDDSDWICRDCARQ
ELERQLSFSGGGEVTGAAKERLEDLMMEVQDLERIVNLLKGQLDPDLTKFDTISATTDEV
DPVRTDSLDLHPGLQTLLEDRFDTLLPVQSLAVEHGLFDGDDQLVVSATATGKTLVGELA
GINRVLNDEGTMLFLVPLVALANQKYEDFQDEYGHLVDVSIRVGASRVADEGERFDPNAD
VIVGTYEGIDHALRTGKDMGNIGTVVIDEVHTLKEEDRGHRLDGLISRLKYTCEQRATRR
DDYGGAQWVYLSATVGNPEQLTEALEATLIEFEERPVPIERHVTFADGQEKVRVENKLVR
REFDSESSKGYRGQTIVFTNSRRRCHEISRKLDYSAAPYHAGLDYKRRKEVERKFGDQDL
AAVVTTAALAAGVDFPASQVIFDSLAMGIEWLSVQEFHQMLGRAGRPDYHDKGKVYVLVE
PETVYHNSMEMTEDEVAFKLLKGEMESVMTHYDEAAAVEETLANITVGGKAAKALNDRML
GEIPTKHAVGKLLEYDFIDGFEPTPLGRVVTEHFLEPGQAFMLIDGIRKDAHPYELVADL
ELRDADL
NT seq
2184 nt
NT seq
+upstream
nt +downstream
nt
atgtcacctattcgacccaccgtctcgatcgccgcggccgacgagacggccgcaagcggt
cgggacgtatcggcccagtccgaaccgctgaaataccgccccatcatactggtggtcgtg
tcgaagcaggtccagcaggtcgaaacgatcttttgtcacgagacgggcgatgactatctc
gtcgtcgtcgaacgtgacggcaaacggctgttccgcgcgaaactcggactctcggagacc
tcggccggcccccgccccgcgaagttccggctcaaggagggctcgagcgaagagccccgc
caacccgacgagttcgtcgaacttgcccgccgagccacgcggctgcgcatctccgaacag
acctccgccgagggtcgtcgcgacctccgggagatgttcgcgggctaccaactcgaggac
aagctcaagaccgtccggacctgtcggtactgtgccggcgcgggccggtactccccgatc
accaccgagaccgccgtcaaggacgactccgactggatctgtcgggactgcgctcggcag
gaactcgagcgccagctgtccttttccggcggcggcgaggtgacgggcgctgcgaaagaa
cggttagaagacctcatgatggaggtccaggatctcgagcggatcgtcaacctgctcaag
ggccaactcgatccggacctgacgaagttcgataccatctcggcgacgaccgacgaggtc
gaccccgtccgaaccgactcgttggacctgcatcccggtctccaaaccctgctcgaggac
cggttcgataccctgctgccggtccagagcctcgcggtcgaacacggcctgttcgacggc
gacgaccagctcgtggtgtcggcgaccgcgaccgggaagacgctcgtcggcgaactggcg
gggatcaaccgcgtgttgaacgacgaggggacgatgctctttctcgtcccgctggtcgcg
ctggccaaccagaagtacgaggactttcaggacgagtacggccacctcgtcgacgtctcg
attcgcgtgggcgcgagccgcgtcgccgacgagggcgagcggttcgaccccaacgccgac
gtcatcgtcggcacctacgaggggatcgaccatgccctgcggacgggcaaagatatgggc
aatatcgggaccgtcgtcatcgacgaggtccacaccctcaaagaagaggatcgagggcac
cgactcgacgggctcatctcccggctcaagtacacctgcgaacaacgcgccacgcgacgg
gacgactacggtggcgcacaatgggtctacctctcggcgaccgtcggcaaccccgaacag
ctcaccgaagcgctcgaggcgacgctcatcgagttcgaagaacggccggtaccgatcgag
cgccacgtcaccttcgccgacgggcaggagaaggtccgcgtcgagaacaaactcgtcaga
cgcgagttcgacagcgaatcctccaaggggtatcgcgggcagacgatcgttttcacgaac
tcccgccggcgctgtcacgagatttcgcggaaactcgattactcggccgcgccgtaccac
gccggactcgattacaaacgtcggaaggaagtcgaacgcaagttcggcgaccaggacctc
gcggccgtcgtcacgaccgccgcgctcgcggcgggggtcgacttccccgcctcgcaggtc
atcttcgactcgctggccatgggcatcgagtggctctccgtccaagagttccaccagatg
ctcggccgcgcgggccggcccgactaccacgacaagggcaaagtgtacgtcctggtcgaa
cccgagacggtctatcacaactcgatggagatgaccgaggacgaagtcgcattcaaactg
ctcaaaggggagatggagtcggtcatgacccactacgacgaggccgccgccgtcgaggag
acgcttgcgaacatcaccgtcggcggcaaagccgccaaggcgctcaacgatcgcatgctc
ggcgagatccccacaaaacacgccgtcgggaaactcctcgagtacgacttcatcgacggc
ttcgaacccacgccgctgggccgggtcgtcaccgaacacttcttggagcccggtcaggca
ttcatgctcatcgacggcatccggaaggacgcccacccctacgagttggtcgcggacctc
gagctacgcgatgccgacctctaa
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