Natrinema sp. J7-2: NJ7G_0457
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Entry
NJ7G_0457 CDS
T02184
Name
(GenBank) helicase c2
KO
K10844
DNA excision repair protein ERCC-2 [EC:
5.6.2.3
]
Organism
nat
Natrinema sp. J7-2
Pathway
nat03022
Basal transcription factors
nat03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
nat00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
NJ7G_0457
09124 Replication and repair
03420 Nucleotide excision repair
NJ7G_0457
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
nat03021
]
NJ7G_0457
03036 Chromosome and associated proteins [BR:
nat03036
]
NJ7G_0457
03400 DNA repair and recombination proteins [BR:
nat03400
]
NJ7G_0457
Enzymes [BR:
nat01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
NJ7G_0457
Transcription machinery [BR:
nat03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
NJ7G_0457
Chromosome and associated proteins [BR:
nat03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
NJ7G_0457
DNA repair and recombination proteins [BR:
nat03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
NJ7G_0457
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Helicase_C_2
DEAD_2
DEAD
ResIII
nSTAND_NTPase5
SLFN-g3_helicase
PhoH
nSTAND3
UvrD-helicase
Motif
Other DBs
NCBI-ProteinID:
AFO55711
LinkDB
All DBs
Position
complement(425725..428097)
Genome browser
AA seq
790 aa
AA seq
DB search
MTNWRTVFGHAQPYDPQVDGIETAIDTGREGGYTVIEGACGTGKTMIALTAGIDLVRDPD
TDYERVLVLTSVKQQLRQFEADLETINENLPADWDPVSGLTLVGKADVCPYNRETTAGFD
DGTVYDRCETLRDRTRDLTGEGGDTTAQNLAARARSQQIGLADSGTGSQNTFLETAGEPT
PYPPELPEYGEGGPVGAETEYCPFYAQYLADLPEDEDGSAAEAVPYDFTDAGMVTPEDLV
ARSVKHGTCPHSVMGAALGEVEVVIGNYYHAFDPRTVGSFTGALLDESTFVVCDEAHMLE
PRVRDLVSEGVADRTLRDAETELSRVIQPITFEREGRQAEGGSKTADADLVRGELNDSDV
SFEELNRTLEFVQDLRAELDRRVTSYLDRNHRGWQSNLNDLHDAEIPLRDPGEPAEDELS
EWAREAGYGDADWVRAEAVGAIVERVLNEAEDEDRTRAAPAVGRVLGEWYRRGHTDYFRE
IELERTWDDTEPPESWRRAYNARLALHNCVPSDAIGDRLGHFGGGILMSATLEPMDAFTE
VTGLQYLAREDDRPVVERRYGLHFPAENRESFAVAAPKYTYDNRGSPGEDNPTRRSYANA
IAKVAQLHGNVLVGMPSYAEAEWAAGTLEERVEKPVLLDAASDDETTQSLKNEFFAGAGK
VLVTSLRGTLTEGVDYSGDRLAAAVVCGVPIVNTSSPRTTAVRRAYDDAFGDGFTYALTI
PAVRKARQAIGRVIRSPDDVGVRVLLDERYARESWDSVRSYLPDDGEFQTVSPDMLDVGL
ERFRPRLSSQ
NT seq
2373 nt
NT seq
+upstream
nt +downstream
nt
atgacgaactggcggacggtgttcggccacgcccagccctacgacccgcaggtcgatggc
atcgagacggctatcgacaccgggcgggaaggcgggtatacggtcatcgaaggggcctgt
ggcaccgggaagacgatgatcgcgctcaccgcggggatcgatctggtgcgcgatccggac
accgactacgagcgcgtgctcgtcctgacgagcgtcaaacagcaactgcgccagttcgaa
gcggacctcgagacgatcaacgagaacctgcccgccgactgggacccggtttcgggactc
acgctcgtcgggaaggccgatgtctgcccgtacaaccgcgagacgacggcggggttcgac
gacggcaccgtctacgaccgctgtgaaacgctgcgggatcgcacccgcgacctcaccggt
gagggcggcgacacgaccgcgcagaacctggccgcccgcgcacggagccaacagatcggg
ctggccgacagcgggacggggtctcaaaacactttcctcgagaccgccggcgaaccgact
ccctacccgcccgaactaccggagtacggcgagggtgggccggtcggggccgagacggag
tactgtccgttctacgcgcaatatctggctgatctgcccgaggacgaggacggctcggcc
gccgaagcggttccctatgatttcaccgacgccggaatggtcacgcccgaagacctcgtc
gctcgctcggtgaaacacggtacgtgcccccactccgtgatgggggccgccctcggcgag
gtcgaggtcgtgatcgggaactactaccacgccttcgatccacgaacggtcggctccttc
accggcgcgctcctcgacgagtcgacgttcgtcgtctgcgacgaggcccacatgttagag
ccgcgcgtccgcgatctcgtcagcgaaggggtcgccgaccgcaccctccgtgacgccgaa
accgaactctcgcgggtcatccagccgatcacattcgaacgcgaggggcggcaggccgaa
ggcggttccaagaccgccgacgccgacctcgtccgcggcgaactgaacgatagcgacgtc
tcgttcgaggaactcaatcgaacgctcgagttcgttcaggacctccgggccgaactcgat
cggcgcgtgaccagctatctcgaccgcaaccatcggggctggcaatcgaacctgaacgac
cttcacgacgcggaaatcccgctccgcgacccgggcgagcccgccgaggacgaactctcg
gagtgggccagggaggcgggctacggcgacgctgactgggtccgcgccgaggccgtcggc
gcgatcgtcgaacgagtcctgaacgaagccgaagacgaggaccgaacccgcgccgcgccc
gccgtcggccgcgtgctcggcgagtggtatcgccgcggccacaccgactacttccgggag
atcgaactcgagcggacgtgggacgacaccgagccaccggagtcgtggcggcgagcctac
aacgcccgactcgccctgcacaactgcgtgccaagcgacgccatcggcgaccgactcgga
cacttcggcggcggcatcttgatgagcgcgaccctcgagccgatggacgccttcaccgag
gtcacggggcttcagtatctcgcccgggaggacgacaggccggtcgtcgagcgccggtat
ggcctgcacttccccgcggagaaccgcgagagcttcgcggtcgccgcgccgaagtacacc
tacgacaaccgtggcagtccgggggaagacaatccgacgcggcgctcgtacgcgaatgcg
atcgcgaaagtcgcgcaactccacggcaacgtcctcgtcgggatgcccagttacgccgaa
gccgagtgggccgccgggacgctcgaggagcgagtcgagaagccggtcctgctcgacgcc
gcgagcgacgacgagaccacgcaatcgctcaaaaacgagttcttcgcgggcgcggggaag
gtactcgtcacgagtctccgggggacgctgaccgagggtgtcgactacagcggtgaccgc
ctcgccgctgccgtcgtctgcggggtcccgatcgtcaacacctcgagtccgcgaaccacg
gccgtgcgtcgggcctacgacgacgcgttcggcgacggcttcacctacgcactgactatt
cccgcagtccggaaggcccggcaggcgatcggccgcgtcatccgcagtcccgacgacgtc
ggcgttcgcgtcctgctcgacgagcgctacgcccgcgagagttgggattccgttcggtcg
taccttcccgacgacggcgagttccagacggtgagcccggacatgctcgacgtcggcctc
gagcggttccgaccgcggctgtcctcacagtaa
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