Natrinema sp. J7-2: NJ7G_0704
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Entry
NJ7G_0704 CDS
T02184
Name
(GenBank) nucleic acid binding OB-fold tRNA/helicase-type
KO
K07466
replication factor A1
Organism
nat
Natrinema sp. J7-2
Pathway
nat03030
DNA replication
nat03420
Nucleotide excision repair
nat03430
Mismatch repair
nat03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
nat00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
NJ7G_0704
03420 Nucleotide excision repair
NJ7G_0704
03430 Mismatch repair
NJ7G_0704
03440 Homologous recombination
NJ7G_0704
03460 Fanconi anemia pathway
NJ7G_0704
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
nat03000
]
NJ7G_0704
03032 DNA replication proteins [BR:
nat03032
]
NJ7G_0704
03400 DNA repair and recombination proteins [BR:
nat03400
]
NJ7G_0704
Transcription factors [BR:
nat03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
NJ7G_0704
DNA replication proteins [BR:
nat03032
]
Eukaryotic type
DNA Replication Elongation Factors
RPA (replication protein A)
NJ7G_0704
DNA repair and recombination proteins [BR:
nat03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
RPA (replication factor A)
NJ7G_0704
MMR (mismatch excision repair)
NJ7G_0704
DSBR (double strand breaks repair)
HR (homologous recombination)
NJ7G_0704
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
tRNA_anti-codon
REPA_OB_2
OB_MEIOB_N
OB_Ssb-like
CDC24_OB3
SHLD2_OB1
Motif
Other DBs
NCBI-ProteinID:
AFO55961
LinkDB
All DBs
Position
648277..649734
Genome browser
AA seq
485 aa
AA seq
DB search
MSDIEGVYEDLEADVSLEEFREAVEAKVEQMGGLADEETAAMLVAHEVGESEVGGIADIE
PGMEEAKFVAKVLSIGEKRTFERDGEDEDGQVVNVEVADETGSVRAAFWDDHAEAAIDEL
EEGQVLRIAGRPKEGFSGVEISVDNVEPDPDTEIDVQVSDTYTVEDLSLGLSNVNLVGLL
LDTDSVRTFDRDDGSEGKVSNLVLGDSTGRVRVTLWDEQAALATELETGTTVEVIDGYVK
DRDGSLELHVGNRGAVEEIDAEVEYVPENTPIEDVEIDQVVDIAGVVRSADPKRTFDRDD
GSEGQVRNIRVQDATDDIRVALWGDKADLDVGPGDEVTLGDVEIQDGWQDDLEASAGWQS
TITVLESESSGPDAADDDSSDSTDENAGLSAFAGDEDGSQMTDGTGRTDAAESADTASTD
AGSDDPDDGEELEFTGVVVQAGSPVVLDDGETTMSVATDADVGLGEEVTARGVVRDGHLE
ANDVF
NT seq
1458 nt
NT seq
+upstream
nt +downstream
nt
atgagcgacatcgagggcgtatatgaggacctcgaggccgacgtttctctcgaggagttt
cgcgaggccgtcgaggcgaaagtcgagcagatgggtggactcgcggacgaggagacggcg
gcgatgctcgtcgctcacgaagtcggcgagagcgaggtcggcggtatcgccgacatcgaa
cccgggatggaagaggcgaagttcgtcgcgaaagtgctctcgatcggcgagaaacggacc
ttcgagcgcgacggcgaagacgaggacgggcaggtcgtcaacgtcgaggtcgcggacgag
accgggtccgttcgagcggccttctgggacgaccacgccgaagcggccatcgacgaactc
gaggagggacaggtcctgcggatcgcgggccgtcccaaggagggcttttcgggcgtcgag
atcagcgtggataacgtcgaaccggaccccgacaccgagatcgacgttcaggtctccgat
acgtacaccgtcgaggacctttcgcttggcctctcgaacgtcaacctcgtcggcttgctt
ctggataccgacagcgtccgcacgttcgaccgcgacgacggctccgaggggaaagtctcg
aacctcgtcctcggggattcgaccggccgcgttcgcgtcacgctctgggacgagcaagcg
gctctcgccacggagctcgagaccgggaccactgtcgaggtgatcgacggctacgtcaag
gaccgcgacggcagcctcgaactccacgtcggcaaccgcggtgccgtcgaggaaatcgac
gcggaggtcgagtacgttcccgagaacacgccgatcgaagacgtcgaaatcgaccaagtg
gtcgacatcgcgggcgtcgtccggtcggccgatccgaagcggacgttcgaccgcgatgac
ggttcggaggggcaggtccgcaacatccgcgtccaagacgcgaccgacgatatccgcgtc
gccctctggggcgacaaggccgacctcgacgtgggcccgggggacgaggtcacactcggc
gatgtcgaaattcaggacggctggcaggacgatctcgaggcctcggcggggtggcagtcg
acaatcacggttctcgagtccgagtcgtccggtcccgacgcggccgacgacgattcgagc
gactcgacggacgaaaacgccggtctatcggcgtttgctggcgacgaagacggctcgcag
atgacggacggcaccggccggaccgacgcggcggaatcggccgacaccgccagcacggat
gccggctcggacgaccccgacgacggcgaggaactcgagttcaccggcgtcgtcgttcag
gccggcagcccggtcgttctcgacgacggcgagacgacgatgagcgtcgcgaccgacgcc
gacgtcggtctcggggaggaggtaaccgcccgcggggtcgttcgcgacgggcatctcgaa
gcaaacgacgtgttctga
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