Nicotiana attenuata (coyote tobacco): 109205154
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Entry
109205154 CDS
T05870
Name
(RefSeq) probable polygalacturonase At3g15720
KO
K01184
polygalacturonase [EC:
3.2.1.15
]
Organism
nau
Nicotiana attenuata (coyote tobacco)
Pathway
nau00040
Pentose and glucuronate interconversions
nau01100
Metabolic pathways
Module
nau_M00081
Pectin degradation
Brite
KEGG Orthology (KO) [BR:
nau00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
109205154
Enzymes [BR:
nau01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.15 endo-polygalacturonase
109205154
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Gene cluster
GFIT
Motif
Pfam:
Glyco_hydro_28
Pect-lyase_RHGA_epim
End_N_terminal
Motif
Other DBs
NCBI-GeneID:
109205154
NCBI-ProteinID:
XP_019223377
LinkDB
All DBs
Position
Unknown
AA seq
404 aa
AA seq
DB search
MQDMLDRVSIFLVCVTSFILHKGLAATFDVTDYGAIGDGVTDDSQAFQQAWLDVCYDCEN
PTMNLPSEKLFLLSPIIFQGPCNSPTINIQVLGNITAPQNLTEWVGCENDSWLYFTGISG
LIINGTGQINGQGATWWNISGSAHKVSGTCHKPTAMHFNFCNDLQLSGLNLVNSSRNHIS
ITFSTRVNISNITITAPEDSPNTDGIDLSMSTTQVQILNSTFQTGDDCISINTGCSDINI
TGISCGPGHGISVGSLGFNETFAAVENINVTNCTLQGTQNGVRIKTWQGGMGYARFINFE
NINLTNVRHPIIIDQFYCNGAHNCGIEPNAVQVSNVTYKDIFGTTPSKIAINLNCSDNCT
ACTNLVFEQINITSVLPEKQTRAACNNAHGQANSTLPPITCLLT
NT seq
1215 nt
NT seq
+upstream
nt +downstream
nt
atgcaagacatgttggacagagtttccatctttctagtttgtgttacttcatttattctg
cacaaaggtctagctgctacttttgatgtcactgattatggtgcaatcggagatggagta
actgatgattctcaagcttttcaacaagcttggctagatgtatgctatgattgtgaaaat
ccaacgatgaacctaccaagtgaaaagttattcttgttgagccctataatatttcaaggc
ccttgcaattctcccactattaatatacaggttttagggaatatcactgcaccccaaaat
ttaacagaatgggtagggtgtgaaaatgatagttggctttatttcactgggatatctggt
ctcatcatcaatggcactggtcaaattaatggtcaaggtgctacctggtggaacatttct
ggttccgctcacaaggtcagtgggacttgccacaagccaacggctatgcactttaatttt
tgtaatgatcttcaattgagtggactgaaccttgttaatagttcaagaaaccatattagc
atcacttttagcacaagggtaaatatctccaatatcactataactgcacctgaagatagc
cccaacactgatggtattgacctctctatgtctactactcaagttcaaattctgaattcc
acatttcaaacaggtgatgattgtatttcgatcaatacgggatgttctgatattaatatt
actggtatttcatgtggaccgggacatggtataagtgtaggaagcctaggatttaatgag
acttttgctgctgtggagaatataaatgtaacaaattgtaccctccaaggaacacaaaat
ggtgtaagaatcaaaacatggcagggtggtatgggctatgccagatttataaattttgag
aatatcaacctcacaaatgttcgtcatcccatcattatagaccaattctattgcaatggt
gctcataattgtggaattgagccaaatgcagtccaagtgagtaatgtaacatacaaggat
atatttgggacaacaccaagcaaaatagctataaatctgaattgcagtgacaactgtaca
gcttgcaccaacttagtgtttgagcaaattaatataacatcagttttgcctgaaaaacaa
actcgtgcagcttgtaataatgctcatggacaagccaattcaactttacccccaataaca
tgcttgttaacataa
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