Nicotiana attenuata (coyote tobacco): 109205346
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Entry
109205346 CDS
T05870
Name
(RefSeq) ERAD-associated E3 ubiquitin-protein ligase HRD1B-like
KO
K10601
E3 ubiquitin-protein ligase synoviolin [EC:
2.3.2.27
]
Organism
nau
Nicotiana attenuata (coyote tobacco)
Pathway
nau04120
Ubiquitin mediated proteolysis
nau04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
nau00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
109205346
04120 Ubiquitin mediated proteolysis
109205346
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
nau04121
]
109205346
Enzymes [BR:
nau01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
109205346
Ubiquitin system [BR:
nau04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
109205346
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-rbx1
zf-C3HC4
zf-RING_UBOX
zf-C3HC4_2
zf-C3HC4_3
zf-ANAPC11
zf-RING_11
zf-RING_16
zf-RING_5
Herpes_IR6
Motif
Other DBs
NCBI-GeneID:
109205346
NCBI-ProteinID:
XP_019223606
UniProt:
A0A314KXR4
LinkDB
All DBs
Position
Unknown
AA seq
530 aa
AA seq
DB search
MMRLQTYAGLSIIATLAVIYHAFNSRGQFYPAMVYLSTSKISLVLLLNMGLVLMCILWQL
TKKIFLGSLREAEVERLNEQSWRELMEILFAITIFRQDFSVMFLAMVTALLLIKGLHWLA
QKRVEYIETTPTVTTLSHVRIVSFLGFLLLIDSLFLYDSVSYLIQTRQASVSLFFAFEYM
ILATTTVSTFVKYVFYISDMLMEGQWEKKPVYTFYLELIRDLLHLSLYLCFFMVIFMNYG
VPLHLIRELYETFRNFKIRVADYIRYRKITSNMNDRFPDATPEELDVSDATCIICREEMT
TAKKLICGHLFHVHCLRSWLERQHTCPTCRALVVPAENGTNVVGSRPDAQQGPGSSGAST
SQSSQANTVANNNVSQHQARLQAAAAAAAVYQKSFVYPSVPTLLWSPGYAPVPPSDSPTG
SSVNVHPDGERASNEQSPQHQLANMPFAQYPQCGFLPFQYPGANNLSIPNAQLEAHKILL
QQQIEVLQNQLKLLENPNTQKSADAVRISDSKGKTILPELSQGQTEGAEM
NT seq
1593 nt
NT seq
+upstream
nt +downstream
nt
atgatgaggttacaaacttatgcggggcttagcataatagctacactggccgttatttat
catgcatttaatagcagaggccaattttacccagcaatggtttatttatcaacgtccaag
atcagcctggtgcttcttcttaatatgggtcttgtcctcatgtgcattttgtggcagctg
actaagaaaatcttccttggttcccttcgagaggctgaggtggagaggctgaacgagcag
tcttggagggaactcatggaaatactttttgccatcacaattttccggcaagacttctca
gttatgtttcttgcaatggtaactgcgctcttgcttatcaagggcttgcactggttggct
caaaagagggttgagtatattgaaacaactccaactgttactacattatcccacgttcgc
atagtctccttcttgggctttctcctcctcatagacagtctcttcttgtacgactctgtc
agctatttgatacagacaagacaggcatctgtttctctattctttgcattcgagtacatg
atacttgcgacaacaactgtctcaacttttgtaaaatatgtcttctacataagcgacatg
cttatggaaggacaatgggagaagaagcctgtctatactttctacttagaacttatccga
gacttgctccacttgtctttgtacttgtgcttcttcatggtgattttcatgaactatggc
gtgcccctgcatttgattcgggagctttatgagacattccgcaacttcaagattcgagtt
gccgattacatacgctatcggaagatcacttcaaatatgaatgaccgttttccagatgct
acaccagaagagctcgatgtaagtgatgctacctgcatcatatgtcgtgaggagatgacc
actgctaagaaacttatttgtgggcatctgtttcatgtgcattgcctccgttcatggcta
gagcgtcaacacacctgtcctacttgcagagcccttgttgtgccagctgaaaatgggacg
aatgtggtaggatcgcgaccagatgctcaacaaggccctggatcaagtggtgcaagtaca
tctcagagttcgcaagcaaataccgtggcaaataataatgttagccaacaccaggctaga
ctccaagctgctgctgcagcagcagcagtttatcagaagtcctttgtttacccttctgta
ccaacgctattgtggtctcctggatatgctccagttcctccgtccgatagtccaacaggc
agttctgtcaatgtgcacccagatggggagcgggcatcaaatgaacagtcaccgcaacat
cagttagcaaatatgccctttgctcaatatccacaatgtggtttcctcccttttcagtat
cctggtgctaacaaccttagtattccaaatgctcaacttgaggcccataagatactttta
cagcaacaaattgaggttttgcaaaaccagctcaagcttttagagaatccaaacacacag
aaatcagcagatgctgtaagaatttctgatagtaagggaaaaacaattttgccagagctc
tctcaaggacaaaccgaaggcgcagaaatgtga
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