Nicotiana attenuata (coyote tobacco): 109205477
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Entry
109205477 CDS
T05870
Name
(RefSeq) vacuolar protein sorting-associated protein 28 homolog 2 isoform X1
KO
K12184
ESCRT-I complex subunit VPS28
Organism
nau
Nicotiana attenuata (coyote tobacco)
Pathway
nau04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
nau00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
109205477
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
nau04131
]
109205477
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
nau04147
]
109205477
Membrane trafficking [BR:
nau04131
]
Endosome - Lysosome transport
Endosomal sorting complexes required for transport (ESCRT)
ESCRT-I complex
109205477
Exosome [BR:
nau04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
109205477
Exosomal proteins of other body fluids (saliva and urine)
109205477
Exosomal proteins of colorectal cancer cells
109205477
Exosomal proteins of bladder cancer cells
109205477
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
VPS28
DAHL
Motif
Other DBs
NCBI-GeneID:
109205477
NCBI-ProteinID:
XP_019223744
LinkDB
All DBs
Position
2:23992621..23997221
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AA seq
278 aa
AA seq
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MSQAKSTDLNFSLLFFVDRLPAATLNFPLFRAACVFHLLLYLTKSSIFARVPSSSPTLLT
KVKIVSPTLMEVKLWNDKREREMYDNFAELFAIIKATEKLEKAYVRDIISPAEYETECQK
LIAHFKTLSSTLKDTVPSIERFHDTYKMDCPAALNRLVTSGVPATVEHRAAAAMSATTSA
AVVAECVQNFITAMDSLKLNMVAVDQVHPLLSDLSSSLNKLSILPADFEGKTKMREWLSR
LSKMGAADELTEQQARQLHFDLESSYNSFMAALPTAGT
NT seq
837 nt
NT seq
+upstream
nt +downstream
nt
atgtcgcaagcaaagagtacagacctcaatttctctctcttattctttgttgatagatta
cctgctgcaacactcaatttcccattattcagagccgcgtgcgtctttcaccttcttctt
tacctgacaaagagtagcatctttgcgcgtgtcccatcctcttctccaacccttttgaca
aaggtcaaaatagtctccccaactctaatggaggttaagctatggaatgataagcgggaa
agagaaatgtatgacaacttcgccgagctctttgctataataaaggcaaccgaaaagctc
gagaaggcttatgttcgtgacatcatctcacctgcagaatacgaaactgaatgccagaaa
ttgattgctcatttcaagaccttatcttccactttgaaagatactgtacctagcattgag
agatttcatgacacctacaaaatggattgccctgcagccctaaaccgtcttgtgacctct
ggggtgcccgctactgtggagcacagagccgccgctgcaatgtcagctacgacctcagct
gctgttgtggctgaatgtgtgcagaacttcatcactgctatggactctttgaagctgaat
atggttgctgttgaccaggtccatcccctattatcggatctatcatcttcccttaataaa
ctttcaattctgccagctgattttgaggggaagacaaagatgagggagtggctctcaagg
ctatcaaaaatgggagctgcagatgagttgacagaacagcaggctcgtcaactccacttc
gatcttgaatcatcatacaattctttcatggcagcactgcccactgctggaacttaa
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