KEGG   Nicotiana attenuata (coyote tobacco): 109205524
Entry
109205524         CDS       T05870                                 
Name
(RefSeq) uncharacterized protein LOC109205524
  KO
K10842  CDK-activating kinase assembly factor MAT1
Organism
nau  Nicotiana attenuata (coyote tobacco)
Pathway
nau03022  Basal transcription factors
nau03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:nau00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    109205524
  09124 Replication and repair
   03420 Nucleotide excision repair
    109205524
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:nau03021]
    109205524
   03400 DNA repair and recombination proteins [BR:nau03400]
    109205524
Transcription machinery [BR:nau03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIIH
     109205524
DNA repair and recombination proteins [BR:nau03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TFIIH complex
     109205524
SSDB
Motif
Pfam: MAT1 DUF5962 DUF5721
Other DBs
NCBI-GeneID: 109205524
NCBI-ProteinID: XP_019223781
UniProt: A0A314KYK9
LinkDB
Position
Unknown
AA seq 188 aa
MVVASGTNNAFGKEMAIRKRIASIFNKREEDFPSLREYNDYLEEVEDMIFNLIEGIDVPA
IEAKIAQYQRENAEQIMIAQARKAEEYAAALAASKGQPTQPDGDAALGLGPRAESSTGPQ
GHYAPAVAGGIAQPRPTQPLPVGSIPGLEYEDEETMKLKAEKAARAGGWSLEISRKRALE
EAFGSLWV
NT seq 567 nt   +upstreamnt  +downstreamnt
atggtggtggcatcaggaactaataatgccttcggcaaagaaatggccatcagaaaacgc
attgccagcatctttaataaaagagaagaggatttcccgtcattgcgcgagtacaatgat
tatttagaggaagtggaggatatgatattcaatttaattgaaggaatagatgttcctgct
attgaggcaaagattgcacagtaccagagagaaaatgcagaacaaatcatgattgctcaa
gcacgtaaggctgaagaatatgcagcagccttggcagccagcaagggacagcctacccag
cctgatggtgatgcagctttgggcctaggtcctcgggcagagtccagtactggtccacaa
gggcactatgcccctgcagttgccggaggtatagctcagccacggcccacacagcctctt
ccagttggatcaattccagggttagagtatgaagatgaagaaacgatgaaactaaaagct
gagaaggctgctagggctggagggtggagtctagagataagcaggaaaagggcacttgaa
gaagcctttggaagcctatgggtctga

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