Nicotiana attenuata (coyote tobacco): 109205631
Help
Entry
109205631 CDS
T05870
Name
(RefSeq) paired amphipathic helix protein Sin3-like 2 isoform X1
KO
K11644
paired amphipathic helix protein Sin3a
Organism
nau
Nicotiana attenuata (coyote tobacco)
Brite
KEGG Orthology (KO) [BR:
nau00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
nau03036
]
109205631
Chromosome and associated proteins [BR:
nau03036
]
Eukaryotic type
Histone modification proteins
HDAC complexes
Sin3A-HDAC complex
109205631
REST complex
109205631
Heterochromatin formation proteins
Other heterochromatin formation proteins
109205631
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PAH
Sin3a_C
Sin3_corepress
PAH_ZNF598
Motif
Other DBs
NCBI-GeneID:
109205631
NCBI-ProteinID:
XP_019223897
LinkDB
All DBs
Position
Unknown
AA seq
1358 aa
AA seq
DB search
MKRLRDDVYANPQFKRPFGSSRGESYGQSQVPGSGAGGGGSGVGGTGGGVGASASTQKLT
TNDALSYLKEVKDMFQDQREKYDLFLDVMKDFKAQRIDTSGVIARVKDLFKGHPNLILGF
NTFLPKGYEITLTEAEEAPPKKTVEFEEAISFVNKIKKRFQNDDHVYKSFLDILNMYRKE
HKGITEVYQEVAALFEDHPDLLDEFTRFLPDSSATASATQTSLGRPSFHRYDERSSATLL
RQPHMDKQRFRRDRIISPHAERDPSAERPEMDDDKTMIKLHKEQKRRAEKENRDRRSRDQ
DYREPDNENNGDISMHRIADKRKSARKVEEFGGTYDDKDGVKNMYSQEFTFCERVKERLC
SPTDYQAFLKCLHIYSTEIISRKELQSLVADLLGKHPDLMEGFCEFLERCERIDGYLAGV
MSNKSLWNEGHTSKSVKEEEKDKEQKREIDGGKEKDRYKEKYWGKSIQELDLSNCKRCTP
SYRLLPEDYPIPTASQRSELGAQVLNDHWVSVTSGSEDYSFKHMRRNQYEESLFRCEDDR
FELDMLLESVSSTAKRAEELLNALNDNSVGVDGPIRIEDHFTALNLRCIERLYGDHGLDV
MDILRKNPPLALPVVLTRLKQKQEEWTKCRSDFNRVWAEIYSKNHYKSLDHRSFYFKQQD
SKNLSTKSLVAEIKEIKEKKQKEDDMILAIAAGSRRPISPHLEFEFADSDVHQDMYKLIK
YSCEEVCSTEEQLNKVLRLWTSFLEPIFGVPYRHHGSEATDDDVLSKHHGLKSNGTSIGE
SDRSPSADATTTKSKQSKDICNGDANSSPQRLNSSRAIFTNTDARPKEDGLAVAGERLLS
SDAVAALGADNACARLESTSGRGTRPGNDAAEDGLGAKSNTDNVPISEGGTSRSLPLANG
GFADGSRVDGFNADSVDPSKNEKEEGELSPNQDFEEDNFVVFRDGAARKGNMQYQSGGAE
MVGCQDTAGENDADADVEDSESVSEAGDVSGSESAANECSREEHEEEDDGEHDELDGKVE
SEGEAEGTSEANFVGGDATVLQMSERFLLTSKPLAKHVVSPHCGGAKNDLRVFYGNDDFY
VLFRLHQILYERLLSAKLNAASSESKWRTGEDTGSDPYTRFMSALYSLLDGSADNAKFED
DCRSIIGNQSYVLFTLDKLIYKLVKQLQTVSSDELDGKLLQLYEYERSRKPEKYVDSVYY
ENAHVLLHEENIYRFESTSSPTRVSIQFMDDGSEKSEVVAVYVDPNFAGYLYNDYLSVEH
GKKESSAVMLKRSVSRNKRKHTDHDVSSALCTVMENIILVNGLECKMASNSSKISYVLDT
EDFFYRLGRKRKKISAGRLLWHGQARVARFNRVLTSSL
NT seq
4077 nt
NT seq
+upstream
nt +downstream
nt
atgaagcgattacgggatgatgtttatgctaatcctcaattcaagcgtccatttggttct
tctcgtggagaatcatacggccaatcacaggttcctggaagtggtgctggcggcggaggc
agtggtgttggaggcactggagggggtgttggtgccagtgctagcacccaaaagttgaca
actaatgatgcattgtcttatttgaaggaagttaaggacatgtttcaagaccaaagggag
aagtatgacttgttccttgatgttatgaaggactttaaggctcaaagaattgacacttcc
ggtgtcatagcaagagtgaaagatttgtttaaagggcatccaaatttgatccttgggttc
aatactttcttgcccaagggctatgaaataaccctcactgaagcagaggaggctcctcca
aagaaaacagttgagtttgaagaagctatcagctttgtgaacaaaataaagaaacgtttc
caaaatgatgatcacgtgtacaagtctttcttagacattttgaacatgtataggaaggaa
cacaaaggcattactgaggtgtaccaggaggttgcagcacttttcgaagaccatcctgat
ttgctggatgagttcacgagattcttgccagattcttcagctactgcatcagcaacacag
acttcattgggccgaccttctttccatcgttatgatgagaggagctctgctacattgctt
cggcaaccacacatggacaagcaacgtttccgccgggataggattatcagtcctcatgca
gaacgtgatcctagtgctgagcgccctgagatggacgatgataaaacaatgataaagttg
cataaagagcaaaagaggcgtgctgaaaaagagaacagggaccgcagaagtcgcgatcag
gattatagagaacctgataatgagaataatggagatataagcatgcaccgcattgctgat
aaaagaaaatctgctcggaaggttgaagagttcggaggcacttacgatgataaagatggc
gtgaaaaatatgtatagccaagagttcactttctgtgaaagagtaaaggagagactatgc
agtccaactgactaccaggcattcctaaagtgcctccatatttatagtacagaaataatt
agcagaaaggagttacaaagtttggttgctgatttacttggaaagcatcctgatcttatg
gaggggttctgtgaattcttggagcgctgtgaacgaattgatggatatctcgcaggtgtt
atgagcaacaaatctttgtggaatgaagggcatacatcaaagtcagtgaaggaggaggag
aaagacaaagaacagaagcgtgaaattgatggaggtaaagaaaaggaccggtacaaggag
aaatactggggaaagtccattcaagagcttgacctttctaactgtaagcgctgcactccc
agttatcgacttcttcctgaagattatccgatacctacagcgagccaaaggtcagagctc
ggggctcaagtgttaaatgatcattgggtatctgtgacctcaggaagtgaggactactct
tttaagcacatgcgcagaaaccagtatgaagaaagcctgtttcgatgtgaagatgatagg
tttgagctagacatgttattggagtcagtgagttcaactgctaagcgtgcagaagagttg
ttgaatgcccttaatgataattcagttggtgtggatggcccaatccgcatcgaagaccac
ttcacagcactgaatttaaggtgcattgaacgtctctatggtgaccatggcctggatgtg
atggacattttgcggaaaaacccacctcttgctctgcctgtggtattaacccgcttgaag
cagaaacaggaggagtggacgaagtgtcgctcagacttcaacagagtttgggctgaaatt
tattctaagaaccattacaagtcgcttgaccaccgaagtttctatttcaagcaacaagat
tcaaagaaccttagcacaaaatccttagtggcggagatcaaagaaattaaggagaaaaag
cagaaagaagatgacatgattcttgctattgccgctggtagtagacgtccaataagccct
catcttgaatttgaatttgctgattctgatgttcaccaagacatgtacaaacttatcaag
tattcttgcgaagaggtttgttccacagaagagcagttaaataaagttctgaggctgtgg
accagctttcttgagccaatctttggtgttccttatcgtcatcatggctctgaggctact
gacgacgatgtcttgtcaaagcatcatggtttgaagagcaatggaacaagcattggcgaa
agtgatagaagtccaagtgcggatgctaccactactaagtctaagcaatcaaaagatatc
tgcaacggagatgcaaattcttcccctcaacgactaaattcttccagggcaatcttcact
aatacagatgctcgccccaaggaagatggattagcagtagctggtgaacgcttacttagt
tctgatgcagttgctgcccttggagcagataatgcttgtgcaagattggaaagtacttca
ggccgtggcacacgacctggtaatgacgctgctgaggatggcctaggagcgaagtctaat
actgataacgtgccaatttcagagggtggcacttcaagatcactacccttggcaaatggc
ggatttgctgatggttctagagttgatgggtttaatgctgactctgttgatccctctaaa
aatgagaaagaagaaggtgagttgtcgcctaatcaggattttgaagaggacaattttgtt
gtctttcgagatggtgccgcacgcaaaggaaatatgcaatatcaatctggaggtgctgaa
atggttggttgtcaggatactgctggtgaaaacgatgcagatgctgatgttgaagatagt
gaaagtgtttccgaggccggagatgtttcaggtagtgagtctgctgctaatgagtgctct
cgggaggagcatgaggaagaagacgatggagagcatgacgagcttgatggtaaagttgag
agtgaaggtgaggctgagggcacgagtgaagcaaactttgttggaggtgatgccactgtg
cttcaaatgtctgaacgttttttgcttacttcaaagcctcttgctaaacatgtggtttca
cctcattgtgggggtgcaaagaacgaccttcgagtcttttacggaaatgatgacttttat
gtgctttttaggcttcatcagattttgtatgaaaggttattatcggcaaagctgaatgca
gcatcatctgaatcaaagtggagaactggagaggatactggttctgatccatataccaga
ttcatgagtgcactgtatagtttgctagatggatctgcagataatgcaaagtttgaggat
gattgccgatcaatcattgggaatcagtcatatgtgctatttactttggacaaactgata
tataaactggtcaagcagcttcaaactgtttcaagtgatgagctagacggtaagctgctt
cagttatatgaatatgaaagatcacggaaacctgagaagtatgtcgattcagtttattac
gaaaatgctcatgtcctcctccatgaggagaacatttaccggtttgaaagtacatcttcc
ccaactcgtgtgtctatccagttcatggatgatggaagtgagaagtctgaagttgttgca
gtttatgtagaccccaattttgctggttatctatataatgattatctatctgttgaacat
gggaagaaagagtcgtctgcagtgatgctgaagagatctgtgagcagaaacaagagaaaa
catactgaccatgacgtatcttccgccctgtgcacggtgatggaaaatattatactcgta
aatggcttggaatgtaagatggcttcaaattcatcaaagatttcttatgtactggacaca
gaggacttcttttaccgtcttggaaggaaaagaaaaaagatttcggctggcagattattg
tggcatggccaggcgagagtagcacgcttcaaccgtgttttgacatcctcgttatga
DBGET
integrated database retrieval system
