Nicotiana attenuata (coyote tobacco): 109205867
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Entry
109205867 CDS
T05870
Name
(RefSeq) SWI/SNF complex subunit SWI3A isoform X1
KO
K11649
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily C
Organism
nau
Nicotiana attenuata (coyote tobacco)
Pathway
nau03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
nau00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
109205867
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
nau03021
]
109205867
03036 Chromosome and associated proteins [BR:
nau03036
]
109205867
Transcription machinery [BR:
nau03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
109205867
Chromosome and associated proteins [BR:
nau03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
109205867
PBAF complex
109205867
GBAF(ncBAF) complex
109205867
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SWIRM
SWIRM-assoc_1
Myb_DNA-binding
NPV_P10
Myb_DNA-bind_6
ZZ
SNAPC3
Ins_beta
Motif
Other DBs
NCBI-GeneID:
109205867
NCBI-ProteinID:
XP_019224171
UniProt:
A0A314KW73
LinkDB
All DBs
Position
Unknown
AA seq
579 aa
AA seq
DB search
MDTSRSQNPNHLKPSDEPDHDLYTIPSYTSWFSWQSIHEVERLSLREFFDGSSITRTPRI
YKEYRDFIITSYREDPTRKLTFTEVRKSLVGDISVLHKVFTFLEKWGLINFDPSNAEIAP
AGIGAAEEEDNKEDEKWRIRVEEGAPHGVRVVAAPHSLKPLVPVPSPVVVGDGGGGRGRS
ADVADSVVKASPLASYSDVYGELMDPQKKESVVCDSCKEQCASGYYEYIKNASYNLCEKC
FKSGNYDKEKLADEFKLMDGANSKAVWTEAETLLLLESVLKHGDDWDLVAQNVKTKSKLD
CISKLIQLPFGDLMLGSIHKKIKLLDTNGEVSSVDQAQGAISESGETPGNQSHEQNQEHQ
QNGDAENETPPLKKIRRAPISEASSFLMKQVARISGAVGPHITASAAEAAVTALCYENQC
STDIFDEADDGLGSIADISETERGSQDQSAKGEEKPASSETEVAVSQRNTIPLTLRMRAA
TATALGAAAAHAKLLADQEEREVEYQVSTLVEAQVKKLQRKMKHVEALNLMMEQQHAQMK
DLEESLVTERMDILQKIFSAGVSRWSDHASAKSQSSSIA
NT seq
1740 nt
NT seq
+upstream
nt +downstream
nt
atggatacatctcgctcccaaaaccctaatcacctaaaaccctccgacgaacctgaccac
gacctttatacaatccctagttacacaagttggttttcttggcaaagcatacacgaagta
gagaggctgtcattacgagaatttttcgatggcagttcaattacaaggacacccaggatt
tacaaagagtacagggacttcattattacctcctaccgtgaggatccgacccgaaagctc
actttcacggaggtccggaagtcattagtgggcgatataagcgtgctccacaaggtattt
acttttctagagaagtggggtttgatcaattttgaccctagtaatgctgaaatagcgccg
gcgggcattggtgctgcggaggaagaggataataaggaggatgagaagtggaggattagg
gttgaagaaggggccccacatggggttagggttgtggcagctcctcattctttgaagccc
cttgtgccggttccgtctccggtggtggtcggggacggaggtggtggcagggggaggagt
gctgatgtggcagatagtgtagtaaaggcgtcacctttggcatcctattcggatgtttat
ggggagttgatggatccacaaaagaaggaaagtgtagtgtgtgatagttgcaaagaacag
tgtgcttcaggttattatgagtacatcaagaatgcaagctataatttatgcgagaagtgc
tttaaaagtggtaattatgacaaggagaaattggcagatgagttcaagttgatggatggt
gcgaactccaaagctgtatggactgaagcagaaaccttactcctattagaatctgtactg
aagcatggtgatgactgggatcttgttgctcaaaatgtcaaaacaaagagtaaactggat
tgtatctcaaagcttatacagttgccttttggggatcttatgcttggttctattcataaa
aagattaaacttttggacacaaatggtgaggtaagcagcgtggatcaagctcaaggtgca
ataagtgagtctggagaaactcctggaaatcaatctcatgagcagaaccaggagcatcaa
cagaatggagatgctgaaaacgaaacccctcctctcaagaaaatacgcagggctccaatt
tcagaagccagtagtttcctgatgaaacaggtggctcggatctctggtgctgttggtcca
catatcacagcatctgcagctgaggctgctgttaccgccctttgctacgagaaccagtgt
tcaacggacatttttgatgaagctgatgatggattgggatcaattgctgatatcagtgag
acagagagagggagtcaagatcaaagtgctaaaggggaggaaaagcctgccagctcagaa
acagaggtggcagtctcccaaaggaatactatacctctaactttacgaatgagggccgca
actgcaactgctctcggtgctgctgctgctcatgccaaattgttggctgatcaggaagag
agagaagtagaatatcaggtttctactttagtcgaagcacaggtgaagaagttgcaacgt
aaaatgaaacatgtcgaagctctgaacctgatgatggagcagcagcatgcgcaaatgaag
gatttagaagagtctttagttacggaaagaatggacatcttgcagaagatatttagcgcg
ggggtatctagatggagtgatcatgcttctgccaaatctcaaagtagcagcatagcttga
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