Nicotiana attenuata (coyote tobacco): 109205979
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Entry
109205979 CDS
T05870
Name
(RefSeq) sister chromatid cohesion protein PDS5 homolog B
KO
K11267
sister chromatid cohesion protein PDS5
Organism
nau
Nicotiana attenuata (coyote tobacco)
Brite
KEGG Orthology (KO) [BR:
nau00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
nau03036
]
109205979
03400 DNA repair and recombination proteins [BR:
nau03400
]
109205979
Chromosome and associated proteins [BR:
nau03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Other sister chromatid cohesion factors
109205979
DNA repair and recombination proteins [BR:
nau03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Shu complex and associated proteins
109205979
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PDS5
PTM_DIR17_Tudor
TPR_DNAAF5
Tudor_5
Rad9_Rad53_bind
Xpo1
DegR
Motif
Other DBs
NCBI-GeneID:
109205979
NCBI-ProteinID:
XP_019224292
LinkDB
All DBs
Position
Unknown
AA seq
1594 aa
AA seq
DB search
MGSKLQLQLKELGSKLDDPPSTKDSLIKLLKQGTTFLSELEQSPPKAMLEAMQPLQAAMV
KPELLKHQDREVKLLVATCICEITRITAPEAPYSDDVLKDIFHLIVSTFSGLGDINSPSF
GRRVVILETLARYRSCVVMLDLECDDLINEMFRTFLSVVRDEHQDSVLTSMQTIMVVLIE
ESEDIREDLLHVMLSVLGRHKKDVTMAGRGLAMKVIEECAGKLEPSIKQFLVSSMSGDSR
PTTFEIDYHEVIYDIYRCAPQILSGVVPYVTGELLTDQLDVRLKAVHLIGDLFALSGSAI
SEAFQPIFLEFLKRLTDRIVEVRMSVLEHVKGCLLSNPVRQEAPQIISALRDRLLDYDEN
VRKQVVAVLCDAACNTLTSMKVETIKLVVRAHSPETGNAESFALNVGEIRALEKLLEQKQ
RLQQEMRRYLSLRQMHQDGDATEIQKKVVFCFRIMSRCFTDPGKAEENFQILDQLKDANV
WRILTALLDPNSSSIQASSSRDELLKILGEKHRLYDFLGTLSLKCSYVLFNKEHVNEILQ
ETNIQKSAGSTDLILCCTHILVILARFCPLLLTGIEEDLIHLLEDDNEIIKEGVLHVLAK
AGGAIREKLGDSSRSLDLMLERICLEGSRRQAKYAVHALASIMKDDGLKSLSVLYKRLVD
MLDEKSHLPAVLQSLGCIAQTAMPVFETREKEIEQFIKKNILERGHTSEGKTKESWEEQS
EICSLKIFGIKTLVKSYLPVKDAHLRLGVDDLLGILKNILSFGEISMQIKSSSVDKAHLR
LAAAKAMLRLSKHWDHKIPVDIFYLTLGTSEARFPQVKKLFLDKVHQYLKDRYLDPKYTC
AFLLDLQFQQPDFEEVKNNLSDVIQIYQQGKARQLSAQSEPLTPAPYPEYILPYLVHALA
HHSSFPDIDECKDVKAFESIYRQLHLFLSMLVHGDEEGKSEGDISREKESILTINSILHS
IKHSEDAVDSAISKNSYAVSDLGLMIAKRLLPNQDDLKESEASVSLPPSLYKQLEKGEQK
DQSLVEVKTWLADESVMVHFESIKFETNGTLKSEITEDEAMKDSETEGNEVPLGKIMERL
KARSKMRKEVKDDPSPPEVRTEHDLDILKVLREIDSNNAGDDNKLDASNGHESAVKTKAT
NKRQKRKTGTDISVPKGAKRQRSSSSWGHKLSAKIKESIEKEDDLLSISEDKSSEEDVYE
PEESDLLTSSIRKKTSFSPKQKRKSTDKTCGDTHEVGVDSRGLKKSKQNTEAVDTHVESN
NMSGSHKQRKKRSIAGLAKCTSKGDTAPTVDLIGCRIKVWWPMDKKFYEGVIKSFDTQKN
KHVVLYDDGDVEVLRLEKECWELVGGGQKPVKGSNSKKASNSKKVSRYEKVNGERKNKAL
AASKQKKETDNMSPLSQVRGKRTPRKNLKYGQKGPSKSSFSRGRLLLGKPLATSKSKENN
LSSGNSEGEQKESMHGSLSEHELSDKDDRSYSDGKPGADDDDRSSGMEESVKEESPLENK
EFEDEPGTPQDSHGSDEEISSSHEKPQPDVSTEKSNDDAERSDSQGSLGDDADSHSIDRD
DSERSSATKSDEELSDDELLSTWKSRAGKSAGGK
NT seq
4785 nt
NT seq
+upstream
nt +downstream
nt
atgggttcaaagctgcaactccagctgaaggagctgggatccaagctcgacgaccctccc
tctaccaaagactctcttatcaagctcttaaagcaaggcacaacatttctttctgagttg
gagcagtcaccgccaaaagctatgttggaggccatgcagcccttacaagctgctatggtt
aaaccagaactcctaaagcatcaagatagggaggttaagcttcttgttgccacctgtatc
tgtgagataacaagaattactgcacctgaagctccttacagtgatgatgttctaaaggac
atcttccatttgattgtcagcactttcagcggcttaggtgatataaatagtccatccttt
ggaagaagagttgtcatcttagaaactctagcaagatatagatcatgtgtcgtaatgctg
gatcttgagtgtgatgatcttatcaatgaaatgttccggacttttctcagtgttgtcagg
gacgagcatcaagatagtgttctgacatcaatgcaaactattatggttgttctcatagaa
gagagtgaggatattcgggaggatcttttacatgtcatgttgtcggttctaggtcgccat
aagaaagatgttacaatggctggaagggggctcgctatgaaggtgatagaggagtgtgca
ggaaaattagagcccagcataaagcagtttcttgtttcttcgatgtctggagacagcagg
ccaacaacatttgaaattgactaccatgaagtcatttatgatatttaccgttgtgctcct
cagatcctatcaggagttgttccctacgtcacaggagagctactgacagatcagctggat
gtacgattaaaagctgtgcacttaattggggatctttttgctctgtcgggatctgctata
tctgaagcctttcaaccaattttcttggaatttttgaagagacttactgatagaatagtt
gaggtccgaatgtctgttcttgaacatgtcaagggatgtcttctgtcaaatccagttaga
caagaagcgcctcagatcatctctgcccttcgggaccggctgttggattatgatgaaaat
gtgcgcaaacaagttgttgccgtgctttgtgatgcggcatgtaacacccttacgtccatg
aaggttgaaacgattaagctggtagtcagagcgcattcgcccgagactggtaacgctgaa
agctttgcgttgaacgtaggtgagattagagcgcttgagaagctgctggagcagaagcaa
aggttgcagcaagagatgaggaggtatctttctttaaggcagatgcaccaggatggcgat
gccactgagatccaaaagaaagttgtattttgcttccgaatcatgtctcgttgttttact
gatcctggaaaggcagaagagaactttcagattcttgatcagttaaaagatgctaatgtc
tggaggatattaacagctctccttgatccaaacagtagctctattcaagcttctagttct
cgggatgaattgctcaagatccttggtgagaagcatcggctctatgactttctgggcaca
ctttcattgaagtgctcatatgtacttttcaacaaggagcatgtaaatgaaatccttcag
gagactaacatacaaaaatctgctggaagcactgatttgattctgtgttgcacacatata
cttgtgattcttgcacgtttctgtccgttgctgcttactggaattgaggaagatttgata
catctgcttgaagatgataatgagataattaaagaaggtgtcttgcatgttttggcaaag
gctggtggagccatccgagaaaaattgggagattcttcaaggtcattagaccttatgctt
gagaggatttgcttggagggaagccggaggcaggccaagtatgctgtacacgcacttgca
tcaataatgaaggatgatgggctcaagtcactttctgttctatataagagacttgttgat
atgctagatgagaagtcacatttacctgctgtactacaatctcttggatgtattgcgcag
actgctatgccagtctttgagacaagggagaaagagatagagcagttcataaagaaaaac
atattggagcgcggtcatacatcagaaggtaaaaccaaagaaagttgggaagaacagagt
gagatctgttcactgaagatatttggaattaagacactggtcaaaagttatttaccagtg
aaggatgcccaccttcgcttgggggttgatgacttgttgggaatcctgaaaaacatactt
tctttcggggaaatctcaatgcaaatcaagtcaagttctgttgataaagcccatttaaga
cttgctgcagcaaaagctatgcttcgtctatcaaagcactgggaccacaagattcctgtg
gatatattttaccttactctggggacatcggaggcccgtttccctcaagtaaagaagtta
tttctcgacaaagttcaccaatacctaaaggatcgttatttggacccaaagtacacttgt
gcattcttacttgacttgcagtttcagcagccagattttgaagaggtcaagaacaattta
agtgatgttatccagatctatcagcaggggaaggcacgccaactttctgcgcaatctgaa
cctttgaccccagctccttatccagaatatattctaccatacttggtccatgctcttgct
catcattcttcatttcctgacattgacgaatgcaaggatgttaaagcatttgaatctatt
tataggcaattgcaccttttcctctcaatgttggtgcatggagatgaagaggggaaatct
gaaggtgatattagtagagagaaggaaagcattttaactataaattctattcttcacagc
ataaaacattcagaagatgcagtagattcggcaatatcaaagaactcatatgctgtctca
gaccttggcctgatgattgcgaaacggctattacctaaccaggatgatcttaaggagtcc
gaagcatcagtatctcttcctccatctctttacaaacaacttgagaagggtgaacagaag
gaccagtctctggttgaagtgaagacatggttggctgatgagagcgtcatggttcacttt
gaatcaatcaagtttgaaactaatggaacattgaaatcagaaattactgaagacgaggcc
atgaaagacagtgaaaccgaaggaaatgaggtgcctttgggaaaaataatggaacggctt
aaagctagatctaagatgcggaaagaggtgaaggatgatccttcacctcctgaggtgaga
actgaacatgatcttgacatcttgaaagtgttgagggagatagattcaaataatgccggc
gatgacaataagttggatgcaagcaatggccatgaatctgcagtcaaaactaaagcaacc
aataaacgtcagaaaagaaaaacaggaactgatatttctgtaccaaaaggtgcaaagcga
caaagatcatcttcttcttggggtcataaactttctgcaaaaatcaaggagtctattgaa
aaggaggatgatcttctatccatctcggaagataagtcctcagaagaagatgtttatgaa
cctgaagagtcagacctgttaacatcatccatcaggaagaaaacaagcttctcgcctaaa
caaaagcgtaaatctactgataagacttgtggtgacacccatgaagttggagtggacagt
cgtggactgaaaaagtctaaacaaaacacagaagcagttgatacacatgtcgaaagtaat
aacatgtcaggatctcacaagcaacggaagaagagaagtatagctggactggccaagtgc
acgtcaaagggtgatacagctcccactgtggacttgattggttgcagaataaaagtttgg
tggcccatggataagaagttctatgaaggtgttattaagtcatttgacactcaaaagaac
aaacacgttgttctatatgatgatggtgatgtagaagtcctccgattggaaaaggagtgt
tgggagcttgttggtggtgggcagaagcctgtgaagggttcaaattcgaaaaaggcttca
aattccaaaaaggtttcacgttacgagaaagtaaatggagagaggaaaaataaagccctt
gctgcctccaagcaaaagaaagagacagataacatgtctccattatcacaagtacgaggg
aagagaactccaaggaagaacttgaagtatggacaaaaaggcccatcaaaatcttctttc
agcagaggaaggctgcttttaggaaagccgttggcaacctcaaagtccaaggaaaacaat
ttaagctcaggtaattcagaaggtgagcagaaagagagtatgcatgggagtttgtctgaa
cacgaactgtctgacaaggatgacagatcgtactctgatgggaaaccaggggctgatgat
gatgataggtcaagtggtatggaagagtccgtaaaagaagaaagtcccttggagaataaa
gaatttgaggatgaacctggcactcctcaggattcccatggatcggacgaggagatctct
tcttcacatgagaaaccacagccagatgtatcgacggagaagtcaaatgatgatgctgaa
agatcagattctcaggggagtttaggagatgatgcagacagtcattcaattgatcgagat
gactctgaaaggagttcagctacaaaatctgatgaagaactatctgatgatgagctactt
agcacgtggaaaagtcgagcagggaaatcggctggagggaagtaa
DBGET
integrated database retrieval system
