Nicotiana attenuata (coyote tobacco): 109206297
Help
Entry
109206297 CDS
T05870
Name
(RefSeq) protein SMG7-like isoform X1
KO
K14409
protein SMG7
Organism
nau
Nicotiana attenuata (coyote tobacco)
Pathway
nau03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
nau00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
109206297
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
nau03019
]
109206297
Messenger RNA biogenesis [BR:
nau03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Other surveillance factors
109206297
mRNA cycle factors
Common to processing body (P body) and stress granule
109206297
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
EST1_DNA_bind
EST1
Motif
Other DBs
NCBI-GeneID:
109206297
NCBI-ProteinID:
XP_019224655
UniProt:
A0A314KUZ6
LinkDB
All DBs
Position
Unknown
AA seq
995 aa
AA seq
DB search
MMTIPMDSAVDQLSREQVQRLYDKNVELENKRRKAAQARIPSDPSAWQQMRENYEAIILE
DNAFSEQHEIEYALWQLHYRRIEELRAHFNAAVNSSVSTNSQNGKVPHRSGPDRVTKIRT
QFKTFLSEATGFYHDLMLKVRAKYGLPLGYFSDDQENQIPSSKDGNKSVEVKKGLISCHR
CLIYLGDLARYKGLYGVGDSKACDFAAASSYYLQASSLWPSSGNPHHQLAILASYSNDEL
VAIYRYFRSLAIESPFSTARDNLIIAFEKNRQCYSQLVGDTKASSTKAVRPRTTGKGRSK
GETRHPLKDGRVEASSVQEKGSSMSDIFKTFSTRFVRLNGILFTRTSLETFGEVQAVVKN
DLLELLSSGTNEKYNFGSDTADCKLAFVRLVAILIFTVHNVNKESENQSYAEILQRSALL
QNAFTAVFEFMGHVVERCVQLNDPTTSFLLPGVLVFVEWLASRQDVALGNEPEEKQSRAR
SFFWKNCIAFFNKLLSSGFKFVDDDKDDTCFFNMSRYDEGESDNRLALPEDFELRGFIPF
LPAQLILDFSRKHSFGGDGGIKEKKSRLQRIIAAGKALANVVRVGEEGIYFDGRAKKFIV
GIEPQVSDDYALNCSMEVPKLSGIELENSAAGQLTVGPPQPKQQLYVEGEEEDEVIVFKP
SVVEKHVNGSASNMMTSEGHVFGVCAASVPPGVSVASVGLGNEMGPFSAALDGLVMQSAL
HASARPPSSIANNSGQYMQPIQPSTSLWSVERAAVMNGFASLNMIGNGPTIISELQDQVF
PPVPYSVPFPQSVNFGMTNNIPVHIPDAAIPSNFSSLSSSVVGIDSMSIKSPSVMSTGIR
KNPVSRPIRHLGPPPGFGSVPSKVLEESSSAMTIKNEHTTLPPMDDYSWLDGYQLPSSHQ
SIGFNNSVNHSTQNYHSMSKSSSSVGMVSFPFPGKQVNSLHVQSGNQRGWEDYQISEQLK
LYQGQPQQLQSGNQQSVELPQRHEGQSLWEGRFFV
NT seq
2988 nt
NT seq
+upstream
nt +downstream
nt
atgatgaccattccaatggatagtgctgtcgatcagttgtctcgcgagcaagttcagcgc
ctctacgacaagaatgttgagttggagaataaacgtagaaaggcagcacaagctagaatt
ccttctgacccaagtgcatggcaacaaatgcgagaaaactacgaagctatcatccttgag
gataatgccttctcagaacaacatgaaatagagtatgccttgtggcagttgcattacagg
agaattgaggaattgcgcgcacacttcaatgctgctgtaaattctagtgtgtcaaccaat
tctcagaatgggaaagttccccatcgtagtggacctgatcgcgtcacaaagatcagaaca
cagtttaaaacttttctttcggaagcaacaggattttatcatgatttgatgctaaaagtt
agggctaagtatggcctgccgctgggatatttctctgatgatcaagaaaatcagattcct
tcctctaaagatggtaacaaatctgtggaggtgaagaaaggattgatatcctgccatcgt
tgtttgatttatcttggcgatcttgctcggtacaaaggcttatatggtgtgggtgattcc
aaggcttgtgattttgcagctgcttcgagttattacctgcaagcttcttcactttggcct
tcaagtggcaatcctcatcaccagcttgcaatactggcttcctattccaatgatgagctt
gtggctatttatcgctattttcgcagtcttgcaatagaaagccctttttccacggcaagg
gataacttgatcattgcatttgagaagaaccgtcagtgttactctcaacttgtgggggat
actaaagcttcctccaccaaggccgtacgtcctcgtacaactggcaaaggaagaagcaaa
ggagaaacgaggcatccactgaaagatggtagggttgaagcaagttcggtccaggaaaaa
ggttctagtatgtctgacatcttcaaaaccttcagcacaagatttgttcgattgaatggt
attcttttcactcgcactagtttggagacttttggagaagtgcaagcggtggttaaaaat
gatctgcttgagcttctctcctctgggactaatgagaagtataattttggttctgacact
gccgactgtaaactggcttttgtaaggctcgtggccatcctaatattcactgttcataac
gtgaataaggaaagcgaaaaccagtcatatgctgagattttacaaagatcggctcttcta
cagaatgcatttactgctgtgtttgagttcatgggtcatgtagttgaaagatgtgtccaa
ttaaatgatcccacaacaagcttccttttgccaggggttttggtgtttgtagaatggtta
gcgagccgtcaagatgttgcacttgggaacgaaccagaagagaagcaaagcagggctaga
tcatttttctggaagaactgcattgctttctttaataagcttttgtctagtgggtttaag
tttgttgatgatgacaaggatgatacgtgcttcttcaatatgagcaggtatgatgaagga
gagagcgataatcgtcttgcattacccgaggattttgagctgaggggatttatacctttt
cttccggcacaacttatccttgatttttcaaggaagcattcttttggtggtgatggtggc
atcaaagagaagaaatcacgtctccagaggataatagcagcaggaaaggctcttgctaat
gtggtccgtgttggagaagagggaatatattttgacggtagagcaaagaaattcatcgtt
ggcattgagcctcaagtatctgatgattatgcgcttaattgctccatggaagttcccaaa
ttgagtggtattgagttggagaattcagctgcagggcagttaactgtaggacctccgcag
ccaaagcaacaattgtatgtggaaggggaggaagaagatgaggtaattgtttttaagcca
tcggtggtagaaaagcatgtgaatggaagcgcttcaaacatgatgacctcagaaggtcat
gtttttggtgtttgtgctgccagtgttcctcctggggttagcgtggcctctgttggtcta
ggaaatgaaatgggtccattttcagctgcacttgatggattggtcatgcagagtgcatta
catgctagtgcaaggccaccctcaagtattgccaataacagtggccaatatatgcagcct
attcaaccaagtacttcattgtggtccgttgaacgagctgctgttatgaatggatttgcc
agcttgaacatgataggaaatggtccaactataatatctgagttgcaagatcaagtattt
ccacctgtgccatattctgtcccttttccccagtccgtcaattttggcatgacaaataat
attcctgtgcatatcccagatgctgccataccatctaacttcagttcactttcatcctca
gtagttggtattgatagcatgtcaattaagtccccatcagtcatgtcaacaggcataagg
aaaaatccagttagcagacctattaggcatctgggtccgcctccaggctttggttctgtt
ccttcgaaagtcctggaggagtcttcttcagcaatgaccataaagaatgaacatactact
cttcctcctatggatgactatagctggttggatggatatcagttgccttcatcacatcag
agcattggtttcaataactccgttaatcattcaacacaaaactaccactcaatgagcaag
agtagtagctccgttgggatggtgagctttcctttccctgggaaacaggtaaactctctg
catgtgcaatcagggaaccagagaggttgggaggactaccagatatctgaacaattaaaa
ctgtaccaggggcaacctcagcaactccagagtggaaaccaacaatctgttgaactgcct
cagcggcatgaaggacagtctctgtgggaaggccgtttttttgtgtga
DBGET
integrated database retrieval system
