Nicotiana attenuata (coyote tobacco): 109206964
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Entry
109206964 CDS
T05870
Name
(RefSeq) probable pectate lyase P18
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
nau
Nicotiana attenuata (coyote tobacco)
Pathway
nau00040
Pentose and glucuronate interconversions
nau01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
nau00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
109206964
Enzymes [BR:
nau01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
109206964
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Motif
Pfam:
Pectate_lyase_4
Beta_helix
Motif
Other DBs
NCBI-GeneID:
109206964
NCBI-ProteinID:
XP_019225387
UniProt:
A0A1J6IMI4
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Position
2:complement(34195540..34198168)
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AA seq
405 aa
AA seq
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MSSLLFILVLFVTLLLTPLLVSSIQDPELVVQEVHRSINASLTRRNLGYLSCGTGNPIDD
CWRCDPNWEKNRQRLADCAIGFGKNAIGGRNGRIYVVTDSGNDDPVNPKPGTLRHAVIQD
EPLWIIFKRDMVIQLKQELVMNSFKTIDGRGTSVHISGGPCITIHYSTNIIIHGINIHDC
KQSGNGNIRDSPHHSGWWDVSDGDGISIFGGKNIWVDHCSLSNCHDGLIDAIHGSTAITI
SNNYFTHHDKVMLLGHSDSFTQDKGMQVTVAFNHFGEGLVQRMPRCRHGYFHVVNNDYTH
WEMYAIGGSAAPTINSQGNRFLAPNQKFRKEVTKHENAPESEWRSWNWRSEGDLMLNGAY
FRQTGAGASSSTYARASSLSARPSTLVGSMTTNAGPLGCKKGSRC
NT seq
1218 nt
NT seq
+upstream
nt +downstream
nt
atgtcaagtcttctcttcatacttgttctctttgtcacactacttctaaccccactcctt
gtttcttcaatccaagatccagagcttgtggtacaagaagttcataggagcatcaatgct
tcattgacgaggaggaacttgggctatttgtcgtgtggaacaggaaatccgattgatgat
tgttggcgttgtgaccccaattgggagaaaaatcgccagcgtttagctgattgcgccatt
ggctttggaaagaatgcaattggaggaagaaatggacgaatttacgtggttactgactca
gggaacgatgaccctgtgaaccctaaacccggaaccctaagacatgccgttatacaagat
gagcctttgtggatcattttcaaaagggacatggtcattcagctcaagcaagaactcgtc
atgaactctttcaagaccatagacggccgtggcactagcgttcacatttcaggtggtcct
tgcattacaatccattacagtacgaacattatcatacacgggattaatatacacgactgt
aagcagagtggtaacggcaacattagggactcaccgcaccattcaggatggtgggatgtt
tccgacggggacggcatttcaatattcggagggaagaatatatgggtggatcattgttcc
ttgtctaattgccacgacggtctaattgatgcaattcatggatccacagcaattacaatt
tctaacaactactttactcatcatgataaagtcatgttattggggcatagtgattctttt
acgcaggataaaggcatgcaagttacagttgcctttaatcattttggtgaaggtttggtg
cagagaatgccgaggtgtagacatggttatttccatgtggtgaataatgactatacccac
tgggaaatgtatgccattggtggtagtgctgcccctactattaatagtcaaggcaatagg
tttcttgctcccaatcagaaattccgtaaagaggtgacaaagcatgagaatgcaccagaa
agtgagtggagaagctggaactggaggtcagaaggtgacttgatgttaaatggtgcctat
tttaggcaaactggtgcaggtgcatcatcatctacttatgctagggcatcaagcttaagc
gcaaggccttctaccttggttggatccatgaccacaaacgccggtcctcttggctgcaaa
aaaggctctcgttgctag
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