Nicotiana attenuata (coyote tobacco): 109207484
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Entry
109207484 CDS
T05870
Name
(RefSeq) uncharacterized protein LOC109207484
KO
K28108
shortage in chiasmata 1
Organism
nau
Nicotiana attenuata (coyote tobacco)
Brite
KEGG Orthology (KO) [BR:
nau00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
nau03036
]
109207484
Chromosome and associated proteins [BR:
nau03036
]
Eukaryotic type
Meiosis-specific proteins
Others
109207484
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cauli_VI
Motif
Other DBs
NCBI-GeneID:
109207484
NCBI-ProteinID:
XP_019225957
LinkDB
All DBs
Position
Unknown
AA seq
1648 aa
AA seq
DB search
MRTRFICTDYFNSTPISARDFLRLPLSPLLTDPNTSKFEDINFSDGVSTLSIDVEIEKFP
IEAALSSFFADVLPHNIDVELSEFADPQPFASCSSEVQTSETTNSEGTIVSYSKGKDNLE
MVQLEIRVLDTSWLPLLEDIPYFGKENMSIPSHSDGEDKLDMPGLEVWLPDSPEILQSIC
LVDDISSVALLEKSADLMEDGAFCQGQYHSSTDVFPHLEVDEAGLVIVSDKSVKEKVLSI
ENIELHCETPRSEGMGSSNELLGSTKFDTFQHLSDSSFAMGCCEVEVPCLNFSAEMDLIS
IIELEKNSVIHESIENDGLIWVASPIIFDELQFFDSDLFSFREFQSEAKVDIDKDTCDLM
LREAENFRNFDELLVSRELIPVDNSFRSFPVPPVPENGNVKSLYLCIKEILAEFEPQSPS
MSDGLYLDWPFLEEEKCEYREDCFNLLREIDANDIAFCLNFSDNEMLVSDYFFSSDSPQE
PNRAESKEMLSLPSNGIPIPPIPYNIEVSTKLLNDGKFPTEGVSSQCIARKASSFGDSRS
KFNDLDFFLNRKEYSRGKDYKPADSSIDTSGMDQISFLSSSATTLLQPQWNIRVHQILLS
TDILLLIDDLKKTFLAIFERQRELIEVQDPSQAVDDDAILRLPKKKLINLIKKRGICRSS
LSQDGDKTMSLVTLSAIKQMVWYLCYYDLHTTYLYIEKLSRSLQGLESKLDFIYNIVKDV
HQKGENDIHKFHPSLSVIKDILETFKSKDSSKILIVAEPVFWWSLKKLLTSMNIAFFQQQ
NGQKDDFYKLEDASMQMIHESDCCLVTHEHLFASFPFEKFEIILEYGGSQESSKVSSILP
KSDRVPPLHFLKVELEDPSVAKALCDGVDMPNINEASVASLFPSLDYDLFHYQFDKYEEG
GPHSCSTLNEIDVTFEELLNYLPVEKNLKGGSMEALLGNEACSTAAEDAVFSSKSEQNRR
SIDGCPETIIIVNTHNFDTEMVISRRSTYQKILAFEKKGVQVIERDLRQPVDIIVSASTC
LAWYDCKNIAKKATASDEAFSCLPQCVENIAANILTSLSFAFSGCILVFEGESNFIAGIM
ESSDELYAAAASLGMDIRIFYSYSSKMTDEIILSCIELSLRTSRGLYPKMLETQTLAESF
LSAFPSINPLSAHAILSSAGLLVEFLEWTHECRIHAVQKYQVPDESITLLSALSRFGERE
DSKSGMTDCSSSVSSAPGSESLHFKSNSVGTKRKTTWNIENLNMPTNELFDFDPPRTFSE
GRLNHPRASGQCDSRISEDIDFFDEFGNSSLSFDTELCVQRQSLDTYGTEDLFKVTELCD
YQMRKDPHMGDELNKLEAPQIDVCLHPRERVYVGMMNKLDRKNNYSGNFKEDITDEVIDI
DDTPAIRKAFRNAKYKSFSTLEHAMEGSKTGVPKAAKKLFFGASGIQEFPTTVDIDSSPD
ACTSVRDLGQGSGQGMGQHLNAGFNHKKSQIKHKKGVTEEGVSEKVKCLSDLTMQDNSTA
CYGETPLSSARQSTRLQQGSPWTIEFLNKMREKSRSRQQFLPRDLSAPWYGYPDKSSEVT
NRKSPSTIEFYKYQGNSCQEAGTGRKRPKKCIQQPASTTEKASDRLIPTWTPIDKRAKRV
LSFATNGNGGQTNLIWSDKNSHTLGRRY
NT seq
4947 nt
NT seq
+upstream
nt +downstream
nt
atgcgaactcgatttatctgcacagattacttcaattccactccaatttcagctcgcgat
ttcctccgcctccctctttcgcctcttctcactgacccgaacacctctaaattcgaagac
attaatttttctgacggagtttctactcttagtatcgatgtcgaaatcgagaaatttccg
atcgaggcagctctctccagcttcttcgccgatgtccttccgcacaacattgatgttgaa
ctctctgagttcgcagatcctcagcctttcgctagttgcagttccgaggtgcaaacaagc
gaaactacgaactcagaggggactattgtttcctacagcaaggggaaagacaatcttgaa
atggtccaacttgaaattcgggtgctggatacatcctggcttccattgctagaagacatt
ccttattttggaaaggagaacatgtcaattccctctcattcggatggtgaagataagttg
gatatgcccggtcttgaagtttggctgccagattcccctgagatcctgcaatcaatttgt
ttagtggatgacatctcttctgtggctttactggagaaaagtgctgatttgatggaagat
ggtgctttctgtcaggggcaatatcattctagtacagatgtctttcctcatcttgaagtg
gatgaggcaggtttggttattgtcagtgacaaatctgtaaaggagaaagttctaagcatt
gaaaatattgagcttcactgtgagacgccaagaagtgaaggaatgggtagcagcaatgag
cttttgggttccacaaagtttgacacattccaacacctatcagatagtagtttcgcaatg
ggctgttgtgaagttgaggttccgtgcttgaatttctctgcggagatggatttgataagt
attattgaacttgagaaaaactcagtgatccatgaaagcatagaaaatgatggtctaata
tgggtagcaagcccaatcatttttgatgaattgcagttctttgattcagaccttttttct
tttcgtgaattccagtctgaagcaaaagtagatatcgataaagatacatgtgacctgatg
ttgagagaagccgagaatttcaggaactttgacgaattgcttgtttcccgtgagctcatc
cctgtggataattctttcagatcatttcctgtgccaccagttcctgagaatggaaatgta
aagtcactgtacttgtgtattaaggaaatcctagctgagtttgagccgcagtctccttcc
atgtccgatgggttatacttagattggccttttctggaagaagagaaatgcgagtatcga
gaagactgtttcaatttgttgagggagatagatgctaacgacattgccttttgcttgaac
ttcagtgacaatgagatgcttgtatcggactattttttctcaagtgatagtccacaagaa
ccaaacagagcggagagcaaggaaatgctgagtttaccttctaatggcattcctatacct
cccatcccttataacatagaagtgtcaactaagttgctgaatgatgggaagttcccaact
gaaggagtatcatcccaatgtattgctagaaaagcatcttcatttggtgactccaggtca
aagtttaatgatcttgattttttcttaaatcgaaaggagtatagtagaggcaaagattat
aaaccagctgacagttcaattgatactagtggcatggaccagatcagtttcctctcttct
tctgctaccacattattgcaacctcaatggaatatcagggtgcatcaaatattgttatct
actgatattctacttctaattgatgatcttaagaagacctttttagctatctttgaaaga
cagagagagttaattgaggttcaggatccatctcaagctgtggacgatgatgctattctt
cgccttccaaagaaaaagctcatcaatttaattaagaaaagaggcatatgcaggtcatct
ttgtcccaggatggtgataaaacgatgtcattggtcacattgtctgcaatcaaacagatg
gtttggtacctgtgctactatgatctgcatacaacctatctatacatagaaaagttatcc
aggagcttgcagggattggaatctaaacttgatttcatctacaacatcgtaaaagatgtg
catcagaagggtgaaaacgatatacataagttccatccatcgctatccgttatcaaggat
atactggagacatttaagagcaaggatagttcaaagatattaattgtggctgagccagtg
ttctggtggtcattgaagaaactattgacgtccatgaatattgcattttttcaacaacag
aatggacagaaggatgatttttacaaattagaagatgccagcatgcaaatgattcacgaa
tcagactgctgtttagtaacccatgagcatctgtttgcctcatttccatttgagaaattt
gagattatcttggaatatggaggttcacaagaatcatctaaagtatcttccatcttgcca
aagtcagatagagttcctccccttcatttccttaaggtggagctggaggaccccagtgtt
gcaaaagctctttgtgatggtgttgacatgcccaacattaatgaagctagtgtggcaagt
ctctttccttcactcgactacgatctatttcactatcagtttgacaaatatgaggaagga
ggtcctcactcgtgctctactctcaatgagattgacgttacctttgaagaactgctaaat
taccttccagtggaaaagaacttgaagggtgggagcatggaggcattactgggaaatgaa
gcttgctctactgcagctgaagatgcagtattcagttcaaaatctgagcaaaatcgcaga
agcatagatggctgtcctgagactatcattatagttaacacacacaattttgacactgaa
atggtaatttcaaggagaagtacataccaaaagattcttgcatttgagaagaaaggagtt
caggtcatagagcgtgatttacgtcagcctgtcgatattatagttagtgcatccacttgc
cttgcttggtatgactgcaaaaacattgcaaagaaagctactgcctccgacgaggctttc
tcttgcttgcctcaatgtgtcgagaatattgcagcaaatattttgacgtcactcagtttt
gctttcagcggctgcattctggtctttgagggagaaagcaactttatagccggaattatg
gagtcatctgatgagctctatgctgctgctgctagcttgggcatggatatacggatcttt
tattcatattcttctaaaatgactgatgagatcatattatcgtgcattgaactttcattg
aggacaagcagaggactttatcctaagatgcttgagacacaaacactggcagaatcattc
ctttctgcatttccttcaatcaatccactctcagcacatgcaatattgtcttcagcgggc
ttgcttgttgagtttctggaatggacacatgaatgcagaattcatgcagtccagaaatat
caggttcctgatgaaagcatcacattactgagtgctttgagcagatttggggagcgggag
gattctaaatcgggaatgacagattgctcctcttcagtttcttctgctccgggctctgaa
agtcttcattttaaaagcaactctgtggggacgaaaagaaaaaccacctggaatattgaa
aatcttaatatgcctacaaatgagttgtttgattttgatccaccacgaacattttctgaa
ggcagactgaatcatcccagagcatctggccagtgcgattctcggatttcagaagatatc
gacttttttgatgaatttgggaattctagcttatcatttgacacagaattgtgtgttcaa
agacagtcattagacacctatgggacagaagatctttttaaggtaactgagctctgcgat
tatcagatgagaaaagatccacatatgggagatgagttaaataaacttgaggctccacaa
attgatgtgtgtttgcatccaagagagagagtttacgtgggtatgatgaacaaattggat
agaaaaaataactattcaggaaattttaaagaggatatcacagatgaggttattgatatt
gatgatactcctgcaattagaaaagcttttcgtaatgcaaaatacaagtccttttctacc
ctggagcatgcaatggaagggtccaaaacaggggttcctaaagctgctaaaaaactcttt
tttggagcaagtggtatccaagaattcccaaccactgtggatattgactctagcccagat
gcctgcacttctgtgagagaccttggacaaggatcagggcaaggaatgggacagcattta
aatgcaggtttcaatcataaaaagagtcaaattaagcacaagaaaggtgtcacagaagag
ggtgtatctgagaaagtaaaatgtttgagtgacctgactatgcaagacaatagtacagct
tgttatggcgagacaccactctcaagcgcacgtcaatccactcgattgcagcaaggttca
ccctggacaattgaatttctgaacaaaatgagggaaaagagtcggtcacgtcagcagttt
ctcccacgtgacctatcagccccttggtacggataccccgacaaatcatcagaagtcaca
aatagaaagagtccatctactattgaattttacaagtatcaaggaaacagttgccaagag
gcagggaccgggagaaagaggcctaagaaatgcatacagcaaccagcatccactactgag
aaggcttcagatcgtcttattccaacatggacacccattgataagagggcaaaacgggtg
ctatcatttgcaacaaatggaaatggagggcaaactaacctgatatggagtgataagaac
tctcatacattgggtagacgatattaa
DBGET
integrated database retrieval system
