Nicotiana attenuata (coyote tobacco): 109207985
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Entry
109207985 CDS
T05870
Name
(RefSeq) polygalacturonase
KO
K01213
galacturan 1,4-alpha-galacturonidase [EC:
3.2.1.67
]
Organism
nau
Nicotiana attenuata (coyote tobacco)
Pathway
nau00040
Pentose and glucuronate interconversions
nau01100
Metabolic pathways
Module
nau_M00081
Pectin degradation
Brite
KEGG Orthology (KO) [BR:
nau00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
109207985
Enzymes [BR:
nau01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.67 galacturonan 1,4-alpha-galacturonidase
109207985
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Gene cluster
GFIT
Motif
Pfam:
Glyco_hydro_28
Pectate_lyase_3
Motif
Other DBs
NCBI-GeneID:
109207985
NCBI-ProteinID:
XP_019226530
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All DBs
Position
Unknown
AA seq
401 aa
AA seq
DB search
MDLKFKVHFALVLLFLAHFGESQTGVFDITKYGANSNADISEALLNAFKEACQSTSPSTI
VIPKGTFTMNQVKLEGPCKSPLELQIQATLKAPSDPSQLKVGEWLTVNKLDQFTMSGGGI
LDGQAAAAWECKKSVKCNKLPNNLSFNSLTNSTIKDITTLDSKSFHVNVNQCKNLTFIRF
NVSAPANSPNTDGIHVSRSSSVNITDSNFSTGDDCISVGDETEQLYITRVTCGPGHGISV
GSLGGNPDEKPVVGVFVRNCTFTNTDNGVRIKTWPASHPGVVNDVHFEDIIVQNVSNPVV
IDQVYCPFNKCNKDLPSQVKISKVSFQNIKGTSRTQDAVSLLCSKGVPCEGIEVGDIDIT
YSGKEGPAKSSCENIKPSLKGKQNPPVCTATAASAPAASSS
NT seq
1206 nt
NT seq
+upstream
nt +downstream
nt
atggatttgaaattcaaggtacattttgcattggtgttgctatttctagcacactttggg
gaatctcaaactggagtttttgatataactaaatatggtgctaatagcaatgcagatatt
agtgaggcattgttgaatgcttttaaagaagcatgtcaatcaacaagtccaagcacaatt
gtgatcccaaagggaacattcacaatgaatcaagtaaaactagaaggtccatgcaaatcc
ccacttgaacttcaaatccaagccactttgaaagctccttcagatcctagccaactcaag
gttggtgaatggttaactgtaaataaacttgatcagttcaccatgtctggtggtggtatt
cttgatggtcaagctgcagctgcttgggaatgcaaaaaatccgtaaaatgcaataaactt
cccaataacttgagtttcaactccctcacaaattccacaatcaaggacataacaacactg
gacagcaaatcattccatgtcaacgtaaaccaatgcaagaacctaacattcattcgattc
aacgttagtgcaccagccaacagcccaaacacagatggaattcatgtctcgagatcgagc
tctgtgaatattacagattcaaatttttctacaggagatgattgtatttcagttggtgat
gaaacagaacaactttatattactagagttacatgtggacctggacatggtattagtgtt
ggaagtctaggtggaaatccagatgaaaaaccagtggttggagtttttgttaggaattgc
acttttactaacactgataatggtgttagaattaagacatggcctgcttctcatcctggt
gttgttaatgatgttcattttgaggatattattgtgcaaaatgttagcaatcctgttgtt
attgatcaagtttattgccctttcaacaaatgcaacaaagatttgccatcacaagtgaag
atcagtaaagtgagtttccaaaacataaagggaacatcaagaactcaagatgcagtgtca
cttctctgcagtaaaggtgtaccttgtgagggtattgaagttggagacattgatataact
tacagtggaaaagaagggccagcaaaatcaagttgtgagaatattaagccaagtttaaaa
ggcaaacaaaatccacctgtttgcactgccactgctgcttctgctcctgctgcttcctct
tcttaa
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