Nicotiana attenuata (coyote tobacco): 109208269
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Entry
109208269 CDS
T05870
Name
(RefSeq) uncharacterized protein LOC109208269 isoform X1
KO
K12617
DNA topoisomerase 2-associated protein PAT1
Organism
nau
Nicotiana attenuata (coyote tobacco)
Pathway
nau03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
nau00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
109208269
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
nau03019
]
109208269
Messenger RNA biogenesis [BR:
nau03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
109208269
mRNA degradation factors
5'-3' decay
Decapping complex
109208269
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
109208269
NCBI-ProteinID:
XP_019226894
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Position
Unknown
AA seq
816 aa
AA seq
DB search
MEKFDSNDFSNLASSSSSVSEGALFDASQYAFFGEDVELRGLEEDDNNGVPLLGGGFGDD
ELPEYHLFEKDEGSAFGSLSDLDDLATTFSKLNRNVTGPRHPGVIGDRGSGSFSRESSSA
AEWTKEADFPDWFGQNFSDSECYQESKRWSSQPHLSAVHLAESKPLYRTSSYPQQPQQLQ
HFLSEPILVPKSSFSSFPPPGGQSQQSSPCSHLRQQNISSLAAGPQSHYFTANLSSLSNS
NMHLAGLPHGLHYGGNMSQLHTTGLSLNNRLQNQWTSHTGLIHGDHSSLLNGILPHQFPH
QNGLLSPQIMSPQQLQQQRLHLAVQPSLGHFSALQSQLFNSYPSPSHLSKYGLADFRNPR
SKSSHKGRQSEYSSKQVTDGSNHKRETNVSQFRSKYMTSDEIESILKMQHSATHRNDPYV
DDYYHQARLAKKAAESRSMRRFCPNKEQSSRSRNSTETQPHLHVDAQGRVSFSSIRRPRP
LLESDPPGLVSNDGSGEQKISEKPLEQEPTFAARITIEDGFYLLLEVDDIDRLLLFSQPQ
DGGAQLRRKRQILLEGMATSLQLVDPLGKSGSSVGLTPKDDIVFLWLVSLPKGRKLISRY
LQLLIPGGELARIVCMAIFRHLRVLFGGLPPDVEAAETITNLAKTVSACVSGMDLNSLSA
CLAAIVCSSEQPPLRPLGSPAGDGATVILKSVLDRATYLLTDPQAGGSFCMPNPALWQAS
FDAFFGLLTKYCLSKYDSIMQSILAQTPSNTEMIGSEVARAVSREMPVELLRAGLPHTNE
QQRKLLFNFAQRSMPVTGFNPHGGSSGQINPESVSC
NT seq
2451 nt
NT seq
+upstream
nt +downstream
nt
atggagaaattcgatagcaatgatttcagcaatttggctagctcctccagctcagtatca
gagggtgcgctgtttgatgcatcacagtatgccttttttggggaagacgttgaattgagg
ggtttagaggaggatgacaataatggtgttcctttgttgggaggtggatttggtgatgat
gagttaccggagtaccatctgtttgagaaagatgagggatcagcttttgggtctttatct
gacttagatgatctagcaactacattttcaaagttgaacagaaatgtcactgggcctagg
catcctggagttattggcgaccgtggatcaggatctttttcccgggaaagttcatctgca
gctgaatggacaaaggaggcagattttcctgattggtttggtcagaatttttctgacagt
gaatgttaccaggaaagcaaaagatggtcttcacagccacatctctctgctgtgcatctt
gcagagtcaaaaccattgtatagaacatcctcataccctcagcaaccccaacaacttcag
cacttcttaagtgaacccattttagtaccaaagtcatcgttcagttcttttcctcctcca
ggtggccagtctcaacaatcctcaccttgcagccatttacgtcagcaaaacatatcatct
cttgctgctggacctcagtctcactatttcactgctaatctctcttctttgtcaaactct
aatatgcatttggcaggcttgcctcatgggctccattatggtggaaacatgtcacagttg
cacaccactggcctttcacttaataaccggctgcaaaatcagtggaccagtcatacagga
ctcatccatggggaccattctagtctcttaaacggtatcttaccacatcagtttcctcat
caaaacgggctattatcccctcagataatgtcccctcagcagctgcagcagcagagactg
catcttgcagtccagccgtctttaggtcatttttcagcactacaatctcaattatttaat
tcctacccttcaccatcgcatctgagcaaatatggattggcggatttcagaaatccaaga
tctaagtcatcacataaaggtagacagagtgagtattcatccaaacaagttactgacggt
agtaaccacaaaagggagactaatgtgtcacagttcagatctaagtacatgactagtgat
gaaatagagagcattctgaaaatgcagcattctgcaacacatcggaatgatccatatgta
gacgattattatcaccaagctcggcttgcaaagaaagcagctgagtcaagatcaatgcgc
cggttctgtccaaacaaggagcaatcttcacggtcgcgcaatagcacagaaacacagcct
catctccatgttgatgctcaggggcgggtttcattttcttctatccgcaggcctcgtcct
cttcttgaatctgatccaccaggccttgtttctaatgatggaagtggtgaacagaagata
tctgagaaacctttggagcaggaaccaacatttgcagctagaattaccatagaagatggt
ttctatcttctgcttgaggttgatgacattgaccggctacttctgtttagtcagccccaa
gatggtggtgctcaactcaggcggaaacggcaaatcctgttagaaggcatggcgacctcg
cttcagcttgttgaccctcttggaaaaagtggcagttctgtagggcttacccctaaagat
gacattgtatttttatggttggtatctcttcctaaaggccgaaagctcatctcgaggtat
cttcagcttcttattcctggaggtgagcttgccagaatagtttgtatggcaatttttcga
catttaagggtcttgtttggtggccttccacctgatgtggaagcagcagagaccattacc
aatcttgcaaaaacagtctctgcatgcgtcagtggcatggacctcaattcgctcagtgct
tgtctagctgctattgtttgttcgtcagagcagcctcctctccgcccacttggaagccct
gctggagatggagcaactgttattctgaagtctgttcttgatagggcaacttatctgtta
acagatcctcaggctggtggcagcttctgcatgcctaatcctgccctttggcaggcttct
tttgatgccttctttggtctacttaccaagtattgtctgagtaagtatgacagtataatg
caatcaatacttgcacagactccgtcaaacacagagatgattggttcagaggttgcaaga
gccgtaagtagagaaatgcctgtcgagcttctacgtgcaggtcttccgcacacgaatgag
cagcagaggaaactgctgttcaattttgctcagcggtccatgcctgttactggatttaat
cctcatggtggaagtagtggacaaataaatcctgaatccgtaagctgctaa
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