Nicotiana attenuata (coyote tobacco): 109208523
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Entry
109208523 CDS
T05870
Name
(RefSeq) DEAD-box ATP-dependent RNA helicase 16
KO
K14810
ATP-dependent RNA helicase DDX56/DBP9 [EC:
5.6.2.7
]
Organism
nau
Nicotiana attenuata (coyote tobacco)
Brite
KEGG Orthology (KO) [BR:
nau00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
nau03009
]
109208523
Enzymes [BR:
nau01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
109208523
Ribosome biogenesis [BR:
nau03009
]
Eukaryotic type
Pre-60S particles
Helicases
109208523
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
P-loop_SecA
Motif
Other DBs
NCBI-GeneID:
109208523
NCBI-ProteinID:
XP_019227197
UniProt:
A0A1J6IPD8
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Position
2:44858901..44865954
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AA seq
595 aa
AA seq
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MNKVEERAAEEEEEEQSFEELGVDPRLIRALTKKSILKPTPIQRVAIPLILEGKDVVARA
KTGSGKTFAYLLPLLQKLFTTQSPSTKNLAPTALILVPTRELCQQVCSEANSLIELCRVQ
LRLVQLTSSMSVSELKTTLAGPPEIVISTPACIQTCLKNGIIQAKAVQDSLSILILDEAD
LLLSYGYEDDLKALTSHVPRRCQCLLMSATSSSDVEKLKKLILHNPYILTLPEVGDTKDD
IIPKNVQQFYISCAARDKLVHILALLKLELVQKKVLIFTNSIDMSFRLKLFFEQFGIKSA
VLNAELPQSSRLHILEEFNAGLFDYLIATDESQSEGKEQVDDQNGNERKKSKKHRKHKLD
AEFGVVRGIDFKNVYTVINFEMPQTAAGYVHRIGRTGRAYNTGASVSLVSAEETEMFEEI
KSLLGENDDKVSQFIAPFPLLSKNAVESLRYRAEDVARSVTKIAVRESRAQDLRNEILNS
EKLKAHFQDNPKDLDLLKHDKMLSKKAPAPHLRDVPDYLVDPTTQEASKIVKLARAAMGN
TNASRGKGSKGRFQRSRDPLKTFSAEAPKRAGKGGMKRKAKDTDNGHKYKKKHSA
NT seq
1788 nt
NT seq
+upstream
nt +downstream
nt
atgaacaaagtagaagaaagagcagcagaggaggaagaagaggagcagagcttcgaggaa
ttaggagttgatcctcgtctcatccgtgccttaaccaagaaatctatccttaaacctacc
cctattcagcgtgttgctattccccttatcctcgaagggaaagatgtggttgcccgagct
aagactggttctggaaagacctttgcttatctccttcctttacttcagaagctctttact
actcagtcaccttcaaccaagaatcttgcacccactgctttaattcttgtacccactagg
gaattgtgccaacaggtttgttcagaggccaattcgttgattgaactatgtagagtgcaa
ttgagacttgttcaattgactagctccatgtctgtttctgaattgaaaactacgttggcg
gggcctcctgaaattgttatatctactcctgcttgtatacagacatgcttgaagaatgga
attattcaagcaaaagctgttcaggattctctctccattctcattctcgatgaggcagat
cttcttttgtcatacggatatgaagatgatctgaaagctcttacatctcacgtaccaaga
cgttgccagtgccttctgatgtctgcaacctcaagttctgacgttgaaaagctgaaaaag
cttattttacacaatccctacatcttaactttgcctgaagtcggtgacacaaaggatgac
attataccaaaaaatgttcagcaattttatatttcttgtgctgctcgtgataagcttgtc
catatccttgccctcttgaagctagagttggttcagaaaaaagtgctgatatttacaaat
tcaattgacatgagttttagactcaaactattctttgagcagtttgggatcaagtctgca
gtattaaatgcggagctgcctcagagttctcgtctgcacatccttgaggaattcaatgct
gggctatttgattacttgattgcgactgatgaaagtcaatcagaaggaaaggaacaggtc
gatgatcaaaatggcaatgagcggaagaaatcgaagaaacaccgaaaacataaattggat
gcagagtttggcgtggttagagggatagacttcaaaaatgtgtatactgtgataaatttt
gagatgcctcaaacagctgcaggctatgtacatcgaattggacgtactggaagagcatat
aatactggagcatctgtctctcttgtatctgctgaagagacagaaatgtttgaagagatt
aaatccttacttggggaaaatgatgataaggtgtcacagtttattgccccattcccgttg
ctgagtaagaacgcagtggagtctttgcgttaccgagccgaggatgttgcaaggagtgtc
acgaaaattgctgtaagagaatcacgggctcaggatctgaggaacgaaattcttaattct
gaaaagttgaaggcgcattttcaagataatccaaaagacttagatcttttgaagcatgat
aagatgttaagtaagaaggcacctgccccacatctacgtgatgtacctgactacctggtg
gatccaacaacacaggaagctagcaagattgtgaagcttgctagagctgcaatgggcaat
actaatgcatctcgcggcaaaggatcaaagggaaggttccaaagaagcagagaccctctt
aaaacattttcagctgaggcaccgaagcgagcaggaaaaggtgggatgaagagaaaggca
aaagatactgataatggccataaatacaaaaagaaacactctgcttaa
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