Nicotiana attenuata (coyote tobacco): 109208608
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Entry
109208608 CDS
T05870
Name
(RefSeq) uncharacterized protein LOC109208608
KO
K18195
rhamnogalacturonan endolyase [EC:
4.2.2.23
]
Organism
nau
Nicotiana attenuata (coyote tobacco)
Brite
KEGG Orthology (KO) [BR:
nau00001
]
09190 Not Included in Pathway or Brite
09191 Unclassified: metabolism
99980 Enzymes with EC numbers
109208608
Enzymes [BR:
nau01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.23 rhamnogalacturonan endolyase
109208608
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Gene cluster
GFIT
Motif
Pfam:
Rhamnogal_lyase
CBM-like
fn3_3
RhgB_N
CarboxypepD_reg
Motif
Other DBs
NCBI-GeneID:
109208608
NCBI-ProteinID:
XP_019227282
LinkDB
All DBs
Position
Unknown
AA seq
679 aa
AA seq
DB search
MVKLHNFFFGGYNIKEKLGDVDTIRNSDLAYLEMFTAASVLAKAYMTQWFKDCNLFGTIT
GKKVIIDNGIVQLTLSNPTGHIAGVSYKGIDNLMEKRFPESRRGYWDTMWKSPEDKDSTF
DTFFMTNFQVIAKDDNKVEVSFTKTWNSNADHDLPLNIDKRFVMLRGSSGFYSYGIFERP
EGMPELRLEEARIAIKLRQSLFLYMAVSDDMQRVMPTDQDRSTGKVLGFREAVKITHPSN
PKLKNEVDDKYQYSSDNKDIKVHGWICNRPHVGFWVITPTNEYRSGGPMKQDLTSHAGAT
SLATFFSGHYAGPELGVSLKEGEPWKKVFGPVFFYLNSDSGNNHRTLWEDAKRQMFEETA
KWPYDFPESKDYPKANERGTISGRLLVDDRYISNDPIFAKSAYIGLALPGDTGSWQTETK
GYQFWTQADETGYFKITGIIPGTYNLYSWVPGVIGDYKYNQTLSITQGSEINLGHLIYNP
PRNGPTLWEIGIPDRTAAEFFVPDPLPGFTNRVLSNSTQKFRQYGLWDRYTDLYPEEDLV
YKIGVSDYTKDWFYAHVTRRTENKKYIPTTWQISFELPTVDKTGSYTLHVALASATYSHL
QGRINNPDRPRPNFETPGIGRSNAIARHGIHGLYSLFSFQIPGYELQNGENIIYLKQVKG
GSPFNGVMYDYIRLEGPPQ
NT seq
2040 nt
NT seq
+upstream
nt +downstream
nt
atggtcaaattacataactttttttttggtggatataatataaaggaaaaattgggggat
gttgatacaattagaaattcagatttagcttacctggaaatgtttactgcagcatctgtt
cttgctaaggcatatatgactcaatggttcaaagattgtaacttatttggtacgataact
ggaaaaaaggtgataatagataatggaatcgtccaacttaccctatcaaatccaactgga
cacattgctggggtaagttacaaaggcattgataatctcatggagaaaaggtttccagaa
tcaaggagaggatactgggataccatgtggaaatctccagaagacaaagatagcactttt
gatacgtttttcatgacaaatttccaagttatagcaaaagatgataataaagtcgaagtt
tcttttacaaaaacgtggaattccaatgctgaccatgatcttcctctaaacatcgacaaa
aggtttgtgatgctgcgaggaagttctggattctactcatatggtatatttgaacgtcca
gaaggaatgcctgaacttagactagaggaagccaggatcgcaattaagctcagacagagt
ttgttcctctatatggctgtatcagacgatatgcaaagggtaatgccaacagatcaagat
cgttcaactggcaaagtccttggtttcagagaagctgttaaaataacacatccatccaac
cctaaactcaagaatgaggttgatgacaagtaccaatattcgtccgataataaggatatc
aaggtacatggatggatttgcaatcgtcctcatgtagggttttgggtgattacaccaacc
aatgaatatcgtagtggtggaccaatgaagcaagatcttacttctcatgccggtgcaaca
tccttagcgacatttttcagtggacattatgcaggtccagaattaggagttagtctcaaa
gaaggagagccatggaaaaaagtatttggtcctgttttcttttatctcaactctgattct
ggtaacaaccatcgtactctttgggaggatgctaaaagacagatgtttgaagaaactgca
aaatggccatatgatttcccagaatcaaaagactatcccaaggccaatgaacgtggcaca
attagtggtcgattattggtcgatgacaggtacataagcaacgatcctatctttgctaaa
tctgcatatattggattggctttgcctggagatactggatcatggcaaacagagaccaag
ggttatcaattttggactcaagcagatgagaccggatattttaagattactggaattata
cccggaacttataacttgtactcttgggtccctggagttattggagattacaaatacaac
caaaccttgagcattactcaaggaagtgaaattaatctaggtcatttaatttataatcct
ccaagaaatggtccaactctatgggaaataggcatccctgatagaactgctgctgaattc
tttgtccccgatccattgcccggcttcactaaccgcgttctcagcaatagtacacaaaag
tttagacaatatggtttatgggatcgttatacagatttatatcctgaagaagatttagta
tacaaaattggtgttagtgattacacaaaggattggttctacgcccatgtaactaggaga
actgaaaacaagaaatatataccaacaacatggcaaatatcatttgaacttccaactgtg
gataaaacgggctcttatacactccatgtggcattggcttctgccacttattcccatttg
caaggaagaataaacaaccctgatagaccaaggccaaattttgaaaccccaggaattggg
aggagtaatgcaatagcaagacatggaattcatggattgtacagtcttttcagttttcaa
attccaggatatgaattacaaaatggagaaaatatcatatatttaaagcaagttaaaggt
ggtagtccttttaatggagtcatgtatgactatattcgactcgaaggccctccacagtaa
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