Nicotiana attenuata (coyote tobacco): 109208750
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Entry
109208750 CDS
T05870
Name
(RefSeq) polygalacturonase-like
KO
K01184
polygalacturonase [EC:
3.2.1.15
]
Organism
nau
Nicotiana attenuata (coyote tobacco)
Pathway
nau00040
Pentose and glucuronate interconversions
nau01100
Metabolic pathways
Module
nau_M00081
Pectin degradation
Brite
KEGG Orthology (KO) [BR:
nau00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
109208750
Enzymes [BR:
nau01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.15 endo-polygalacturonase
109208750
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Gene cluster
GFIT
Motif
Pfam:
Glyco_hydro_28
Pect-lyase_RHGA_epim
Beta_helix
NosD
Motif
Other DBs
NCBI-GeneID:
109208750
NCBI-ProteinID:
XP_019227450
UniProt:
A0A314KQ45
LinkDB
All DBs
Position
Unknown
AA seq
390 aa
AA seq
DB search
MNTRNFILLLITIFFHSSSGSKTTYNVESYGAKPDGKTDSTKAFLSAWAAACASTKSVVI
YVPQGRYLIGSAAFWGQYCKNKATTIKIDGTLVAPSDYNVIGNTGNWLKFERVNGVTISG
GTFDGQGASLWACKASGKTCPAGATTLAFYNSNNIVMSGLTSVNSQMFHVVVDGCQNAKL
QKMKISASASSPNTDGIHIEASSGVTILKTVIGTGDDCVSIGPGTSNLWIENVSCGPGHG
ISIGSLGWGMQEAGVQNVTVKSTTFRGTQNGLRIKTWARPSNGFVKGVLFQHSVMVNARY
PILIDQEYCPDQKNCPGQESGVKISDVTYQDVHGTSTSQVAVKLACSKANPCKGIRLEDV
NLTFKNQQPQSLCSNAAGTSYGVNKPASCL
NT seq
1173 nt
NT seq
+upstream
nt +downstream
nt
atgaataccagaaattttattcttcttcttataaccatcttctttcattcatcatcagga
agcaagactacttacaatgtggaaagttatggagccaaacctgatggcaagactgattca
acaaaagcatttctgagtgcatgggctgcagcttgtgcttccacaaagtctgttgtgata
tatgtgccacaaggaaggtatttaataggaagtgctgcgttttggggacaatattgcaag
aataaagctactacaatcaagattgatggcaccttagtggcaccctctgattataatgtt
ataggtaatactggaaattggctaaagtttgagagagtcaacggagtcaccatttctggt
gggacttttgatggtcaaggtgcttctctttgggcttgtaaagcctctggcaagacttgt
cctgccggagcaacgacacttgcgttttacaattcaaacaacattgtgatgagtggattg
acttcagtaaacagccagatgttccatgtggtagttgatgggtgccaaaatgctaagctg
cagaagatgaaaatctcagcctcagctagcagcccaaacactgatgggattcatatagaa
gcttcctctggtgtcaccattctgaaaactgtaattggtactggagatgactgtgtttca
ataggccctggcacctctaacttgtggattgaaaatgtctcctgtggccctggccacggc
ataagcattggaagtctaggctggggtatgcaagaagcaggagttcaaaatgtcacagtg
aagtccactacatttagaggtactcaaaatggtctgagaataaagacatgggcaaggcct
agcaatggatttgtaaaaggtgttctctttcagcattctgtgatggtgaatgccagatat
ccaatcttaattgaccaagaatattgccctgatcagaagaattgccctggccaggaatca
ggagttaagataagcgatgtaacatatcaagacgttcatggaacatcaacatcacaagtc
gcagtaaaacttgcttgtagtaaggctaatccctgcaaagggattagactggaggatgta
aatcttacctttaaaaatcaacaaccacaatcgttatgctccaatgctgctggaacttcc
tatggtgtaaataaaccagcaagctgtttgtag
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