Nicotiana attenuata (coyote tobacco): 109208963
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Entry
109208963 CDS
T05870
Name
(RefSeq) pectate lyase
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
nau
Nicotiana attenuata (coyote tobacco)
Pathway
nau00040
Pentose and glucuronate interconversions
nau01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
nau00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
109208963
Enzymes [BR:
nau01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
109208963
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pectate_lyase_4
Beta_helix
NosD
Motif
Other DBs
NCBI-GeneID:
109208963
NCBI-ProteinID:
XP_019227668
UniProt:
A0A314KR42
LinkDB
All DBs
Position
Unknown
AA seq
397 aa
AA seq
DB search
MDAYRTKISVFFLLVLLTFTAFATATNIPRRQLSNKKYKGPCRAENAIDKCWRCDPNWIE
NRQKMADCALGFGSNAIGGKSGRIYVVTDNSDDDVVDPKPGTLRYGVIQKEPLWIIFGKN
MKIKLSRELIVTSNKTIDGRGFNVHIQNGAGIKIQSASNIIISNLRIHNIVPTPGGLIRE
SEDHVGLRGDDEGDGISIFSSHDIWIDHISMSRATDGLIDAVAASTNITISNCHFTDHEK
VMLFGANDHYVLDKDMKITLAYNHFGKRLDQRMPRCRFGFFHLVNNDYTHWERYAIGGSS
GATIISQGNRFIAEDELLVKEVTYREKLTASVAEWMKWTWISDGDDMENGATFTPSGDQN
LLDKIDHLNLIKPEPSSKVGILTKFSGALSCVKGRPC
NT seq
1194 nt
NT seq
+upstream
nt +downstream
nt
atggacgcctacagaacaaaaattagtgtattttttctccttgtgttactcacatttact
gcatttgcgacagcaacaaacatcccaagaaggcaactcagtaacaaaaaatacaaaggc
ccatgccgggccgaaaatgcaatcgacaaatgctggcgatgcgacccaaattggatcgag
aatcgccagaaaatggccgattgcgcattgggctttggcagcaatgcgatcggaggaaag
tctggccgaatttacgtcgtcaccgacaattctgacgacgatgttgtcgatcctaagccc
ggaactctccgatatggtgttatccaaaaggagccattgtggatcatatttggcaaaaac
atgaaaattaagcttagtagggaacttatcgtgactagcaacaaaactattgacggccgt
ggatttaatgtccatatacaaaatggagctggcattaagatacaatctgcatccaacatt
attatttctaacctccgtattcacaatattgtacccaccccaggtggcttgatcagggag
tccgaggaccacgttggcctaaggggcgacgatgaaggtgatggcatcagcatcttcagt
tcgcatgatatatggatcgatcacatctctatgtctcgtgcaaccgatggtcttatcgat
gctgttgctgcttccactaacattaccatatccaattgccacttcactgaccacgaaaaa
gtaatgttgttcggcgctaacgatcattacgtgcttgacaaggacatgaaaattacatta
gcgtacaatcactttggaaagaggttggatcaaaggatgccgagatgcaggtttggattt
ttccatttggtgaacaatgactacactcattgggaaaggtacgctattggcggaagcagt
ggagccaccatcattagtcagggtaatcgatttattgctgaggacgaattgttggtgaaa
gaggtaacatatagggaaaaacttacggcgagtgtggcggaatggatgaaatggacttgg
atatcagatggtgatgatatggaaaatggtgcaacatttacaccatctggtgaccagaat
ttactcgataaaattgaccatctcaatctgattaaaccagaaccttcttctaaagttgga
attcttactaagttttctggtgctctgtcttgtgtcaaaggacgcccatgctaa
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