Nicotiana attenuata (coyote tobacco): 109208964
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Entry
109208964 CDS
T05870
Name
(RefSeq) probable pectate lyase P59
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
nau
Nicotiana attenuata (coyote tobacco)
Pathway
nau00040
Pentose and glucuronate interconversions
nau01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
nau00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
109208964
Enzymes [BR:
nau01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
109208964
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Pec_lyase_N
Pectate_lyase_4
Beta_helix
Motif
Other DBs
NCBI-GeneID:
109208964
NCBI-ProteinID:
XP_019227669
UniProt:
A0A314KPI9
LinkDB
All DBs
Position
Unknown
AA seq
447 aa
AA seq
DB search
MGGPKLKYSFFFLFISFATIIPSLMAHIGDFDEVWRRRAEEAREYARQIYEPNPENVTLA
FNQKVRDTMKELRQVTVSNSTRRGLGTKKYKGPCMVTNPIDRCWRCDPNWADNRKRLADC
AMGFGSKATGGKDGEIYIVTDNSDDYAEPKPGTLRYAVIQKEPLWIIFERSMTIRLHQEL
IMQSDKTIDARGANVHIAKGAGITLQYIKNVIIHGLHIHDIVEGSGGMVRDAVDHIGIRT
VSDGDGISIFGASNIWIDHVSMKKCYDGIIDAVEGSTGITISNGHFTDHNEVMLFGASDS
SSIDQVMQITLAFNHFGKRLVQRMPRCRWGYIHVVNNDYTHWNMYAIGGSMHPTIITQGN
RFIAPPDIFKKQVTKREYNPEEVWKHWTWRSEGNLFMNGAYFIESGDPDWSKKHTELYDG
ISAAPAEEVTWITRFAGALGCKEGKAC
NT seq
1344 nt
NT seq
+upstream
nt +downstream
nt
atgggaggacctaagttaaagtattcgttcttctttctatttatcagttttgctacaata
ataccgagcctaatggctcacattggtgacttcgacgaggtgtggcggaggagagccgaa
gaagcaagagaatatgcccgtcagatttatgagcccaaccctgaaaatgtcacccttgca
tttaaccagaaagttcgcgatactatgaaggaactaaggcaagtgacagttagcaatagc
acaaggagaggtctagggaccaaaaagtacaagggaccttgcatggtcacaaatccaatt
gataggtgctggagatgtgaccctaattgggctgacaataggaaaaggttagctgattgt
gcaatgggttttggatccaaggccactggtgggaaggatggcgaaatctacatcgtcacc
gacaattcagacgattatgctgaaccaaaacctggaactctccgttatgccgttatccaa
aaggagccattgtggatcatattcgaaagaagtatgaccatcaggttacaccaggagttg
atcatgcagagtgacaagaccatcgatgctcgtggggctaacgttcacattgctaaaggc
gctggcattaccctccagtacatcaagaacgtgatcatccacggactccatattcatgac
attgtcgaaggaagtggtgggatggttcgtgatgcagtggaccatattggcatacgtacc
gttagtgatggagatggcatttctatttttggtgcgtccaatatatggattgatcatgtc
tctatgaagaaatgctatgacggaatcatagacgctgtggaaggatcgactggtatcact
atatccaatggacatttcactgatcataatgaggtgatgttgtttggtgcaagtgacagt
tcttcaatagatcaagttatgcaaatcacattagctttcaatcattttgggaagagattg
gtgcagagaatgccaaggtgccgatggggatatattcatgttgttaacaatgactatact
cactggaatatgtatgccattggtggtagcatgcatcccactatcattactcagggtaat
cgttttattgcccctcctgacatcttcaagaaacaggtaacaaagagggagtacaaccca
gaagaagtgtggaagcactggacatggagatcagagggaaatctatttatgaatggtgca
tacttcattgaatctggtgatccagattggtccaagaaacacacagagctttatgatgga
atatcagcagccccagctgaagaagttacatggataactagatttgcaggagcacttggt
tgcaaagaaggaaaggcttgttaa
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