Nicotiana attenuata (coyote tobacco): 109209260
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Entry
109209260 CDS
T05870
Name
(RefSeq) serine/arginine-rich splicing factor SR45a
KO
K12897
transformer-2 protein
Organism
nau
Nicotiana attenuata (coyote tobacco)
Pathway
nau03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
nau00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
109209260
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
nau01009
]
109209260
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
nau03041
]
109209260
Protein phosphatases and associated proteins [BR:
nau01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
109209260
Spliceosome [BR:
nau03041
]
Common components
Common spliceosomal components
SR proteins
109209260
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
CoV_nucleocap
RRM_occluded
RRM_5
Motif
Other DBs
NCBI-GeneID:
109209260
NCBI-ProteinID:
XP_019228040
UniProt:
A0A0M8KRD4
LinkDB
All DBs
Position
Unknown
AA seq
218 aa
AA seq
DB search
MADSPRKRYSRSPSPWEEKSRSRSRSRSRSRSRSWSRPRGRSRSKSQGRAEVSNPGNTLY
VTGLSTRVTERDLEEHFSKEGKVKSVFLVVEPRSRISRGFAFITMDSLEDANRCIKNLNQ
SVLEGRYITVEKSRRKRPRTPTPGHYLGLESTRGDGYRGDRGRYRDRDEYGYRRPPRRSP
YRGVRGYSPGRSPYAGRSRRLRSRSYSPYERNYHRGSR
NT seq
657 nt
NT seq
+upstream
nt +downstream
nt
atggctgattctcctcgcaaaaggtattcccgctctccttctccttgggaagaaaagtca
agatctcgctctcgatcaaggtctagatcccgatccagatcatggtcaaggccaagagga
aggtccaggtccaaaagtcaaggaagggctgaagtttctaatcctggaaacacactctat
gtgactggattatctacaagggtcactgaaagggaccttgaggagcatttctcaaaggaa
ggaaaggtgaagtcagtttttctggttgtggagccccgttctcgtatctctcgtggtttt
gcttttataacaatggacagtcttgaggatgctaaccgctgcattaagaaccttaaccag
tctgtccttgaaggccggtacataacagtggagaagtcccgtagaaaacgcccaaggact
ccaacacctggtcattatcttggacttgagagcacacggggtgatggttatcgtggtgat
cgtggtaggtatcgtgaccgtgatgaatatgggtatcgaagacctccaaggcgctcgcca
tatagaggtgtccgaggttattctcctgggcgttctccttatgctggaaggtcaagacgt
ctgcgatcccggtcatattctccttatgagaggaactatcatcgtggttctagatag
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