Nicotiana attenuata (coyote tobacco): 109209503
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Entry
109209503 CDS
T05870
Name
(RefSeq) piezo-type mechanosensitive ion channel homolog isoform X1
KO
K22128
piezo-type mechanosensitive ion channel component 1/2
Organism
nau
Nicotiana attenuata (coyote tobacco)
Brite
KEGG Orthology (KO) [BR:
nau00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
nau04131
]
109209503
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
nau04040
]
109209503
Membrane trafficking [BR:
nau04131
]
Endoplasmic reticulum (ER) - Golgi transport
Others
Others
109209503
Ion channels [BR:
nau04040
]
Other channels
Mechanosensitive channel (Piezo)
109209503
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Piezo_cap
Piezo_THU9_anchor
THU_Piezo1
Motif
Other DBs
NCBI-GeneID:
109209503
NCBI-ProteinID:
XP_019228329
LinkDB
All DBs
Position
2:49919276..49947943
Genome browser
AA seq
2473 aa
AA seq
DB search
MGSFLRGFVLPSLLLSAGLLNWSLISLVNLVSSLLLRFTAPKRGFRFKGRVLLWFVFLFS
VLTVLLEVVFLIVSAILGAEWALADAWWMKLIGLMKLKSWRSPSVIYLLVLQLLAAGVTL
FEIHGNRFRLAQLQDSHWEHLLSVLEQIGSCLRVSSCLFLPALQLIVGISNPSWLSLPFF
ICSCVGLVDLSLTSNFLGLFRWWKFLWLYAGFNICLLYFYQLPIAFPQMFYVVADYIGLY
KISTNSGWQEICSGLSLLAFYYLISLVKDDLEEMYFIMTMSEGNLTERLLPLRHSFFVRE
NRSGVRHTNVLLRRTVFRIFTINFFTYGFPVSLFALSFWSFHFASICAFGLLAYIGYILY
AFPSLFRLHRLNGLLLVFILLWAVSTYVFNVGFVFLNWKLGKDMEIWEMVGLWHYPIPGF
FLLAQFFLGILVAVGNLVNNSVFLCMSDEENQSSSDSFGEEVKEETKVLIVATVAWGLRK
CSRAIMLVLIFLIATKPGFIHAVYMVFFFVYLLSHDINEKMRQSLILLCEAHFAILYILQ
LNLISKTLERESSLSMVILSQLGLLQSDSYWDFLEIAVLACFCAVHNHGFDVLFSFSAIV
QHTPCPPVGFSILKAGLNKSVLLSVYASSSSRDHDHDHSHEKRIASYLSAIGKKFLSVYR
SFGTYIAFVTILITVYLVKPNYISFGYIFLLLLWIIGRQLVEKTKRRLWYPLKLYGILVF
VLIYSLSIFPTFEAWMSRNFDIQLYLGYDHGASLLENVWQSLAIVIVMQMYSYERRQSKY
IHSEDPGPSQFGIFGFVRRFLIWHSQKILFVALFYASLSPISAFGLFYLLGLVLCSTLPK
ASRIPSKLFLIYTGLIVATEYLFQMWGKEAGMFPGQKHYALSLILGLEVYRPSFWGLEAG
LRAKVLVIAACTLQYNVFHWLEKMPTSLLNGTRSGEPCPLFVSEEDILPLVSDGENKPAA
NSSGLSTQGMRATSKSWPYFGQNIHQSSHGVSSTTGVSDDSSRRKYSFGSIWGSRKESHK
WNKKLVLALRKERLEMQKATLKIYLKFWVENMFNLFGLEINMVGLLLASFALLNAVSLLY
IALLAACVLLRRRIIRKVWPIFVFLFTLILLLEYFAMWKSLMPLNKHLPSQSVHCHDCWS
SSDAYFDYCKKCWLGLTVDDPRMLISYYVVFMLACFKLHADRTSSLSGSFTYRQMVSQRK
NSFVWRDLSFETKSMWTFLDYLRLYCYCHLLDLVLALILITGTLEYDILHLGYLGFALIF
FRMRLTILKKKNKIFKYLRIYNFAVIVLSLAYQSPFIGDFNAGRCETIDYIYEMIGFYKY
DYGFRITSRSALVEIIIFVLVALQSYMFSSPEFDYVFRYLEAEQIGAVVREQEKKAAWKT
AQLQHIRESEEKKRQRNLQVEKMKSEMLNLQIQLHSTEANSAATRGDTSPASEGLRRRKN
LSHPNLGERHPDKLEINVNSDPVFSHDFPESPSSARAESPLATELMNHPMVTSICEISEI
EEDAGHNTLNLDKENKRKGQSKDNPLVSAVQLIGDGVSQVQSIGNQAVSNIVSFLNIPQD
DSDSNGTSTAGDGISYEREGENATHTHLDRSSSLQSDRSRTSETASLQIGRIFHHIWSQM
RSNNDVVCYCCFLLVFLWNFSLLSMVYLAALFLYALCVNTGPSYIFWVVMLIYTEIYILV
QYLYQIVIQHCGFSIQSTTLQELGFPTKRITSAFVISSLPLFLVYLFTLLQSSITAKDGE
WFSLGYSNWKRRLLDPKEDLVASGWSEKANKLFLPIKNMVKMVIRGCSRYWKSLTQEAES
PPYFVQLSMDVHMWPEDGIQPERIESGINQLLRLMHDDRCKNQNPSHCSCSSRVQIQSIE
KSSENPYIALAVFEVVYACPSTECTPEQFKSLTPAADIAKEIRGAQSMGLVEEVGFPYPI
LSIIGGGRREVDLYAYIFGADLSVFFLVAIFYQSVIKNKSEFLDVSQLEDQFPKEFVFML
MAIFFLIVVDRIIYLCSFATGKVIFYIFNLILFTYVITEYAWNIDAQQSAAGLALRAIYL
TKAISLALQAIQIRYGVPHKSTLYRQFLTSKVTQINYLGYRLYRALPFLYELRCVLDWSC
TKTSLTMYDWLKLEDINASLYLVKCDAVLNRATHKPGDKQTKMTKFCNGICLFFILICVI
WAPMLMYSSGNPTNIANPVNDARVQFDISRRGGGRLTLYQSTLCEMIPFNQLNDDLNLDP
HGYLYPYNVNDIQLICCQPDASTLWLVPDVVQRRFILSLKEMDVKFSWVLTRDRPKGKEV
VKYERSLDPADCPKPSEVKKVLNGSTNSFRVYNIYPRYFRVTGSGEVRPIEQEENDVSAD
IVLNRGVSEWWSFHDINSLDVKGCGGLRGPMAIIVSEETPQGLLGETLSKFSIWGLYITF
VLAVGRFIRLQCSDLRMRIPYENLPSCDRLIAICEDIYAARAEGELGVEEVLYWTLVKIY
RSPHMLLEYTKPD
NT seq
7422 nt
NT seq
+upstream
nt +downstream
nt
atgggaagttttcttcgtggttttgtgttgccatctctgctattatcagccggtttactc
aattggagtttgatttctcttgtcaatttggtatcttctcttcttctgcggtttactgca
ccaaaaagaggattccgtttcaaagggagagttctgttgtggtttgtttttctattttca
gttcttactgttctgctggaagtggtttttcttattgtatctgctattttgggtgcggaa
tgggcattagctgatgcctggtggatgaaacttattggattgatgaaactgaagtcatgg
aggtcgccctcagtaatttatctcttggttctgcaactattagctgctggtgttacttta
tttgaaatccatggcaacagatttcgcttggctcagctgcaggattcccactgggaacat
ctcttatcagttctggaacaaattggttcctgtcttagagtgagttcttgcttatttctg
cctgctcttcaattgattgtgggaattagcaatccctcttggctttctctaccgttcttc
atttgtagctgtgtgggcctagttgatttgtctttaacaagcaactttttaggtttattc
aggtggtggaagtttctctggctatatgctggtttcaacatttgtctgctttatttttat
cagctccctatcgcatttccacagatgttctatgtagtagctgattatattggtctatac
aagatatcaacaaactctggttggcaagaaatctgttctggcctctctcttttggcattc
tactatttgatctctttggttaaggatgatttggaggaaatgtatttcatcatgaccatg
agcgaagggaacttaactgagcggcttcttcccttgcggcattccttttttgttcgcgaa
aacagatctggtgtgaggcatactaatgttttattgaggagaacagttttccgaattttc
actatcaactttttcacgtacggcttcccggtctcattgtttgccctttctttttggagc
ttccattttgcaagtatatgtgcgtttggactgcttgcatatattggctacatcttgtac
gcttttccatccttgtttcgtctacatcgattgaatgggttgcttctagtcttcattctt
ttgtgggcagttagcacgtatgtatttaatgtgggcttcgttttcctcaactggaagctc
gggaaggacatggagatctgggagatggttgggttgtggcattatcctattcctggcttc
ttcctgctcgcacagtttttccttggaatccttgttgcagttggtaatctcgtaaataac
tctgtttttctgtgcatgtcagatgaagaaaaccaatcatcgagtgacagcttcggtgaa
gaagtgaaagaagagaccaaagtgttgattgtggcaacagttgcctggggattacggaaa
tgttctcgggctattatgctagtattaatattccttattgcaacaaaacctggattcatc
catgctgtatatatggtattcttttttgtttatcttctgagccacgatatcaatgaaaag
atgcgccagtctttaatccttctatgcgaggctcattttgccatcctgtatattcttcag
cttaatctgatctctaaaacactggaacgtgaaagctcattgagtatggtgatcctatct
cagttgggcctcctccaaagtgatagctattgggacttcctcgaaatagctgtgcttgca
tgcttctgtgcagttcataaccatggctttgatgtgttattctcattttcagccattgta
cagcatacaccttgtcctcctgtgggatttagcattttaaaagctgggttgaacaaatca
gtcctgttgtctgtttatgcctcttccagcagtagagaccatgatcatgatcattcacat
gagaaaaggatagcttcatacctcagtgccatagggaagaaatttttgtctgtatataga
tcatttggaacctatatagcttttgtgaccattcttatcactgtgtatctggtgaaaccc
aactacatatcttttgggtacatcttccttcttctcctctggatcattggaaggcaacta
gtcgagaagacaaaaagacgcctatggtatccattaaaactctatggaattttagtgttt
gttctcatctatagtttgagcattttcccaacttttgaggcctggatgtccagaaatttt
gatattcagttgtaccttggctatgaccatggagcatcactattggaaaatgtatggcag
tctcttgcaattgtaattgtaatgcaaatgtatagctatgaaaggcgacaaagcaaatac
atccattcggaagatcctggtccatcacagtttggaatatttggtttcgtcagacggttt
ctgatttggcacagtcaaaaaattttgttcgttgcactgttttatgcatctttatctcca
ataagtgcatttgggcttttctatcttctgggtcttgttctctgttcaaccctgccaaaa
gcttcccgaataccatctaagctgttcttgatttacactggacttatagtggccactgaa
tatctgtttcagatgtggggtaaagaggctgggatgtttcctggtcaaaagcattatgct
ttatctcttatcttgggccttgaggtatatagaccaagcttttggggacttgaagcaggt
ttgagggctaaagtgctggtgattgctgcatgtacacttcagtataatgttttccattgg
ttggaaaagatgccaacttctcttttaaatggcactagatctggggaaccttgtccactg
tttgtctcagaagaagatatattgcctttagtttccgatggggaaaacaagccagctgca
aactccagtggattgtctacacaagggatgcgggcaacaagcaagtcatggccatacttt
ggccagaatatccatcaatcttctcatggcgtgtcctctaccacaggagtctctgatgat
agcagtagaagaaaatattcttttggttccatctggggaagcagaaaggagagtcataaa
tggaataagaagcttgttcttgcactgagaaaagaaagacttgaaatgcagaaggctacc
ttgaaaatttatttgaagttttgggtggagaatatgttcaacctctttgggcttgagatc
aatatggttggactgcttctcgccagctttgctttacttaatgctgtctccttgctctac
attgctttgctagctgcttgtgttcttctgagacgacgaatcattcgtaaagtttggccg
atttttgtatttttgtttactttgattcttctgctggagtactttgccatgtggaagagc
ttgatgcctttaaataagcacctaccaagtcagtccgtgcattgtcatgattgctggagc
agctcggatgcatattttgattattgtaaaaagtgttggcttgggcttactgttgatgac
cctcgaatgctgatcagttattatgtggtcttcatgcttgcatgtttcaagctccatgct
gaccgcacatccagtttatcagggtcatttacgtaccgtcagatggtctcacagcgcaag
aattcttttgtgtggcgagatctatcatttgaaaccaaaagcatgtggacctttcttgac
tacttgaggctctactgctattgtcatcttctggatcttgtacttgctttgattctgata
acaggtaccctcgagtatgatattctgcatcttggatatcttggctttgctctgatcttc
tttcgaatgaggcttacgattttgaaaaagaaaaataagatattcaagtatcttcgcata
tacaactttgctgttatagttctctctctggcctaccagtctccatttattggtgatttc
aatgcgggaagatgtgaaacaatagattacatttatgagatgattggattctacaaatat
gattatggctttcgaattacctcgagatcagctttggtcgagatcattatttttgtgctt
gtcgcactgcaatcatacatgttctcttccccagaatttgattatgtgttccgttatctt
gaggcggaacaaattggtgctgttgtacgcgagcaagagaagaaagctgcctggaagact
gcgcagttacagcacattcgtgaatctgaggagaagaaacgccagcgaaatttgcaagtg
gagaagatgaaatcagagatgctcaacctacaaatacagcttcatagtactgaagcaaat
tctgctgccactcgtggtgacacttctcctgctagtgagggtttaaggaggaggaagaat
ctttcacatccgaacttaggggaaagacacccagataaactggagataaatgttaattca
gaccccgtgttttctcatgatttccctgaatctccaagtagtgccagggcagaaagccca
ttggcgacagaactaatgaatcacccgatggtaacttctatatgtgagataagtgaaatt
gaagaagatgcaggtcataatactttgaacctggataaagaaaacaaaagaaaaggccaa
tccaaggataaccctttggtttctgcagtacagttgattggtgatggtgtttctcaagta
cagtccatcggaaatcaggctgtaagcaatattgtgagctttctgaacattccacaagat
gactctgattctaatgggacctcaactgctggggatggaatatcttacgagagagagggt
gaaaatgctacacacactcatctggatcgttcttcttctctgcaatctgataggagtaga
acgtctgaaacagcaagtttgcaaattgggagaatcttccatcacatatggtcccagatg
cgttcaaataatgatgttgtatgctattgttgctttcttctcgtcttcctttggaatttc
agtttgctttctatggtgtacctggcagctctttttctatatgctctttgtgtgaatact
gggccaagttacatcttttgggttgtcatgctaatctacacagagatatacattttagtc
cagtatctttatcaaatagttattcagcactgtggtttcagcatccagtcaactactctt
caagagttgggttttcctacaaaacggataacatctgcttttgtaataagctcgctgccg
ttatttctggtctacttgtttaccctcttacagagctctataacagcaaaagatggtgaa
tggttttctctaggatacagtaattggaaaaggagactcttggacccaaaggaggacctc
gtggcatctgggtggagtgagaaggcgaacaagctcttccttcccataaaaaatatggta
aaaatggtgattagaggctgttctaggtattggaaatcactaacacaggaggcagaatcg
ccaccgtactttgtccagttgtccatggatgtccacatgtggccagaggatggaatccaa
ccggagaggattgaatctggaataaatcaattgctaaggcttatgcatgatgatagatgc
aaaaaccaaaaccccagccattgttcttgttctagtagggtccaaattcaaagcattgaa
aagagtagtgaaaatccatacatcgcattggctgttttcgaggtggtttatgcctgccca
tcgacagaatgtacacctgaacagttcaagtcactcactccagctgctgacatagcaaaa
gagattcgtggagcacaaagcatgggtcttgttgaagaagttggatttccataccctata
ctctccatcataggtgggggtagaagggaagttgatctttatgcttatatttttggtgct
gatttgagtgtgttcttcttggttgctattttctaccaatctgttataaaaaacaaaagc
gagtttttggatgtttcccaacttgaggatcagtttcccaaggagtttgtatttatgttg
atggcaatattcttcttgattgtggttgatcgcatcatatacctctgttcatttgccaca
ggaaaagtgatcttttacattttcaatctcattctttttacatatgtcatcacggagtat
gcttggaatatagatgcacagcaaagtgctgctggtttagccctccgtgcaatatatcta
actaaagcaatatctctggcattgcaagccatacaaatccggtatggtgttccacacaag
agcacattgtatcgccaattcctcaccagtaaagttactcaaatcaattatctaggctac
cggctatatcgtgctctccctttcctgtatgaattgcggtgtgtactggactggtcttgc
actaaaacttcattgacaatgtatgactggctgaagttggaagacataaatgcaagcttg
taccttgtcaaatgtgatgctgttttgaacagagctacacataaaccaggagacaagcag
actaagatgaccaaattctgtaatggaatatgtttgttcttcatattgatttgtgtgatc
tgggctcccatgctgatgtacagcagtggtaatccaactaacattgcaaatcctgtaaat
gatgcaagagttcagtttgatatcagcagaagaggtggaggaaggttaaccctctaccaa
tctactctttgtgaaatgattccatttaatcagctcaatgatgatttgaatcttgatccg
catggctatctttacccatacaatgtaaatgatattcaacttatttgttgccaacctgat
gcaagtactctgtggctggttccggatgtggttcagagaagattcattctgtctcttaaa
gagatggatgttaaattttcttgggttcttacaagggacaggcctaagggaaaggaggta
gtgaaatatgaaagaagtcttgatcctgcggattgtccaaagccatcggaagttaagaaa
gttctaaatggttcaaccaatagcttccgggtgtataatatatatccaagatattttcgt
gtgactggttcgggggaagttaggcctatcgaacaggaggaaaatgatgttagcgcggat
atcgttttaaatcggggagtctctgagtggtggtctttccatgatatcaactcactggat
gtaaaaggctgtggagggttgagagggcctatggccataattgtatcagaggaaacaccg
cagggattgctaggtgaaactctcagcaaattcagtatatggggtctctatatcacattt
gttttagcagttggccgcttcatcagactgcagtgctccgatttgcgaatgagaatccca
tatgaaaatcttccttcatgtgacagattgattgccatctgtgaggatatatacgctgca
agagcagagggtgagcttggagtggaggaagtcctatactggacgctggtgaagatatat
aggtctccgcacatgttgctcgagtatactaagcctgattag
DBGET
integrated database retrieval system
