Nicotiana attenuata (coyote tobacco): 109210033
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Entry
109210033 CDS
T05870
Name
(RefSeq) transcription initiation factor IIF subunit alpha isoform X1
KO
K03138
transcription initiation factor TFIIF subunit alpha
Organism
nau
Nicotiana attenuata (coyote tobacco)
Pathway
nau03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
nau00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
109210033
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
nau03021
]
109210033
Transcription machinery [BR:
nau03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIF
109210033
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIF_alpha
zf-C3HC4_3
DZR_2
DZR
Zn_ribbon_3
DUF1258
Zn_Ribbon_1
Motif
Other DBs
NCBI-GeneID:
109210033
NCBI-ProteinID:
XP_019228948
UniProt:
A0A314KNV1
LinkDB
All DBs
Position
Unknown
AA seq
538 aa
AA seq
DB search
MSIDLVLKPSCSRCGSTSELYGSTCKHLTLCMSCGKNMAETRDKCYECGTPITRLIREYN
VRACSSNDKNYFIARFASGLPNFSKKKNESKWTLQKEGLQGRQVTDTLREKYKNKPWLLE
DETGQFQFHGQLEGAQSAQYYLLMMQGEELVAIPAGSWYNFNKVAQYKQLTLEEAEEKMK
NRRKTADGYQRWMMKAANNGPAAFGEVERFDDKESGSGGTRGRKKTSGDEDEGNGSDHGD
EDEEEEAARKSRLGLNKRGADDDEEGPRGGDLDLDDDDIEKGDDWEHEEIFTDDDEAVGN
DPEEREDLAPEIPAPPEIKQDDDDEDEGDEEGGGLSKSGKELKKLLGKANGLNESDAEDD
DDDDDTEEDISPVLAPKPKEAPKEESIDNSSPSKPSASGPTRGTPTSKSAKTKRKANGDD
SKPTNGAPLKKVKTETDAKPGKDETPSTAKNSVLPKGASPSSKTAPSPATGPVTEEEIRA
VLLQRKPVTTQDLVSQFKSRLKCKEDKAAFADVLRKISKIQKTGTGTSYVVLRERTNQ
NT seq
1617 nt
NT seq
+upstream
nt +downstream
nt
atgtcgatagatttggtactgaaaccgtcgtgtagcaggtgcggctccacgtcggagttg
tacggaagcacctgcaagcacttgactctttgcatgtcttgtggtaaaaacatggctgag
actcgtgataaatgctacgaatgtggtactccgatcacacgactgattcgagagtataat
gttcgggcttgctccagcaatgacaagaattatttcattgctcgatttgcttcaggctta
ccgaacttttcaaaaaagaagaatgagagtaaatggactttacaaaaagaaggtttgcaa
ggacgtcaagttacggatactttgcgggaaaagtacaagaataaaccatggctattagag
gatgaaaccggtcaatttcagttccatggtcagcttgagggagcacagtcagcacaatat
tatctattgatgatgcagggtgaagagttggttgctattccagctggttcttggtacaac
ttcaacaaagttgcccaatataagcaacttactctggaggaagcagaggagaaaatgaaa
aatagaaggaaaactgcagatgggtaccagagatggatgatgaaagcagcaaataatgga
cctgctgccttcggtgaagtagaaagatttgatgacaaggaaagtggatctggtgggaca
agggggcgtaagaaaacttctggtgatgaggacgaaggcaacggttcggaccatggggat
gaagatgaggaagaggaggctgctagaaaaagcaggctgggactcaacaaaagaggcgct
gatgatgatgaagagggtcccagagggggtgatcttgatctggatgatgatgatattgaa
aaaggggatgattgggagcatgaagagatttttacggatgatgatgaagctgttgggaat
gatcctgaggagagggaagatctggctcctgaaattcctgctcctccagagattaagcag
gatgacgatgacgaggatgaaggtgatgaagagggagggggtctgagtaaatctggtaaa
gagctgaaaaagttgcttggaaaagctaatggattgaatgaatcagatgctgaggatgac
gatgatgacgatgatacagaagaggatatttcacctgtattagctcctaagccgaaggaa
gctcctaaagaagaatcgatcgacaacagcagtccttcgaaaccatctgcttctggaccc
actcgtggaactccaacttcaaaatcagctaagactaaaagaaaagctaatggtgatgac
tcaaaaccaaccaatggtgctcccttgaaaaaagtgaaaacagaaacggatgccaaacct
gggaaagatgaaactccgtctactgcgaagaacagtgttctcccaaagggtgcatcaccc
tcttccaaaactgctccaagtcctgccacaggtcctgttactgaagaagaaattagagct
gttctattgcagagaaaaccagtgaccacacaggatcttgtcagccaatttaaatctcgt
ttaaaatgtaaagaggataaggctgcttttgctgatgtattgaggaagatctccaagata
cagaagaccggtacaggaacgagctatgttgtgttacgagagaggacaaatcaatag
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