Nicotiana attenuata (coyote tobacco): 109210094
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Entry
109210094 CDS
T05870
Name
(RefSeq) UV-stimulated scaffold protein A homolog
KO
K23720
UV-stimulated scaffold protein A
Organism
nau
Nicotiana attenuata (coyote tobacco)
Pathway
nau03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
nau00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
109210094
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
nau03400
]
109210094
DNA repair and recombination proteins [BR:
nau03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
Other TCR factor
109210094
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Paralog
Gene cluster
GFIT
Motif
Pfam:
UVSSA_N
DUF2043
VHS
Motif
Other DBs
NCBI-GeneID:
109210094
NCBI-ProteinID:
XP_019229035
UniProt:
A0A1J6IRS2
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Position
1:17956984..17961414
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AA seq
674 aa
AA seq
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MKLGTPMEEGKEKMVVAGLIDKATNSTRPEVDPRLLKAIKSVVRSSDSELRLAAHTLMSL
MKRDHSQVRYLALLIIDELFMRSKLFRTIVVENLDQLLTSSVGFRRTLPLPPPASVASVL
RTKAIEFLEKWNSSFGIHYRQLRLGYDYLKNTLRFQFPNLQANAARLQQERREREMRTKE
ILLKKFETLKENLASIKDEIQLTVDEIGECLNILSTKDEEDILLPPLDDEEIVEFRNSEL
RQIRLDSLKEGEKIKEDSENKIVFDALRELFKILVTKHMVTVQEWISVLIRVETTDTRFR
DSALKDLIDIHNHLKSVKKKCEESGCTLPKTRSAEEEDIWEEGNVEAENGKLHKVPDQGG
NCSFGLNFSGMRVEAPECSNFNVKGSDKQQVANGGSETDTSRGKLLAEAPVMSWGSFLDD
WGSGSSRDVLANQRGLDLDGHWGRVDHDAVIPAEKIAELKVHATVYREDPVEIQPCRVPL
RNGGLCQRRDLKICPFHGPIIPRDDEGNPIDTGPSTEDQAAESEQQEPINRCSSVGEKIH
DLDDKLVEKLAKQAVKNVRQRDKEDTKKREHDKQILKRAKLAKVREHNQEVLRDAALAST
SRSLYAGEDRDRALSSRSSSRSKKETLASMLKKKKTAKDRLGQRLLNGRARDATVRQLTV
AEDANYREAFPNQW
NT seq
2025 nt
NT seq
+upstream
nt +downstream
nt
atgaaattgggaaccccaatggaggaaggaaaagagaaaatggtggtggcagggttaatt
gacaaagccaccaactccactagaccggaagtggatccccgccttctcaaagccatcaaa
tcggtggtccgttcctctgattcggagctccgacttgccgcccataccctaatgtccctc
atgaaacgtgaccactctcaggtacgatatctcgctcttctcataatagatgaactcttt
atgcgctcaaaactttttagaactattgtcgtcgagaacttggatcagttactcacttca
agtgttgggttcagaaggactctgccacttccacctcctgcttctgttgcttctgtgtta
cgcaccaaagcaattgagttcttagagaagtggaattcttcatttggcattcattatagg
cagctcaggttggggtatgactatttgaagaataccctccggtttcaatttccaaacttg
caagcaaatgcagctaggcttcagcaggaaaggagggaaagagaaatgaggacaaaggag
atcctgctgaagaaatttgaaaccttgaaggaaaatcttgcttctataaaggatgaaatt
cagttaacagttgatgaaattggcgagtgtttgaacattttaagcacaaaggatgaagaa
gatatattgttgcctcctttagatgatgaagaaattgtggagttccgcaactctgaactc
cgtcaaatccgtcttgattctttgaaggaaggagaaaaaattaaagaggacagtgaaaat
aaaattgtgtttgatgcattgagggaactattcaagattctagtgacaaaacatatggtc
acagtgcaagaatggatctctgttctcataagagtggaaacaacagacactaggtttagg
gactccgcattaaaggatcttattgatattcataatcatctcaaatcagtgaagaaaaaa
tgtgaagaatctggttgcactctgcctaaaactagaagtgccgaggaagaagacatttgg
gaagagggtaatgtggaagcagaaaatggaaaattacataaagtgcctgaccaaggtggg
aattgttcctttggtctgaatttcagtggaatgagagttgaagctcctgaatgcagtaat
tttaacgtaaaaggaagtgataagcagcaggtggccaatggtggcagtgaaacagacacc
tctagaggtaagcttttagctgaagctccggttatgagttggggttctttcttggatgat
tggggatcaggatcaagcagggatgttttggcgaaccaaagaggattggatcttgatggc
cattggggtagggtggaccatgatgctgttattcctgctgaaaaaattgcagagttgaaa
gtccatgcaactgtttatagggaagatccggttgaaatccaaccatgtcgggtccctttg
agaaatggaggactgtgtcagaggagagatttgaaaatttgtccatttcatggacctatt
attcctcgagatgatgaaggtaacccaattgatacaggcccatcaacagaagatcaggct
gcagagtcggagcaacaagagcccatcaatagatgctcttcagttggggagaaaatacat
gatttagatgataaacttgtggaaaaattagcaaagcaggctgtgaaaaatgtccgacag
agagacaaagaggacactaagaagagagagcatgacaaacagattttgaagcgggcgaag
cttgcaaaagttcgagaacataatcaagaagttctacgtgatgctgcactggcgtcaacc
tcaagatccttatatgctggagaagatcgggatagagctttgtcgtctagatcttcgtcc
aggagtaagaaagaaactctagcatctatgttaaaaaagaaaaaaactgccaaagataga
ttgggtcaaaggcttcttaacggccgtgctagggatgctacagtacggcagttaacggtc
gctgaggatgctaattaccgtgaagcctttccaaatcaatggtag
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