Nicotiana attenuata (coyote tobacco): 109210175
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Entry
109210175 CDS
T05870
Name
(RefSeq) squalene synthase-like
KO
K00801
farnesyl-diphosphate farnesyltransferase [EC:
2.5.1.21
]
Organism
nau
Nicotiana attenuata (coyote tobacco)
Pathway
nau00100
Steroid biosynthesis
nau00909
Sesquiterpenoid and triterpenoid biosynthesis
nau01100
Metabolic pathways
nau01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
nau00001
]
09100 Metabolism
09103 Lipid metabolism
00100 Steroid biosynthesis
109210175
09109 Metabolism of terpenoids and polyketides
00909 Sesquiterpenoid and triterpenoid biosynthesis
109210175
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
nau01006
]
109210175
Enzymes [BR:
nau01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.21 squalene synthase
109210175
Prenyltransferases [BR:
nau01006
]
Terpene biosynthesis
Squalene/phytoene synthase
109210175
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SQS_PSY
Motif
Other DBs
NCBI-GeneID:
109210175
NCBI-ProteinID:
XP_019229098
UniProt:
A0A314KMA5
LinkDB
All DBs
Position
Unknown
AA seq
411 aa
AA seq
DB search
MGSLGAMLRNPEDIYPLMKLKLAARYAEKQIPPQPHWAFCYIMLHKVSRSFSLVIQQLPV
ELRDAVCIFYLVLRALDTVEDDTSVATEVKVPILMSFHRHVYDREWHFSCGTKDYKVLMD
QFHHVSTAFLELEKHYKEAIEDITMRMGAGMAKFICKEVETIGDYDEYCHYVAGLVGLGL
SKLFRASGKEDLASDSLSNSMGLFLQKTNIIRDYLEDINEVPKCRMFWPRQIWSKYVDKL
EDLKCEENSVKAVQCLNEMVTNALSHVEDSLTYMSTLRDPAIFRFCAIPQVMAIGTLAKC
YNNVEVFRGVVKMRRGLTAKVIDRTRNMADVYGAFYDFSCILKAKVEYKDPNAAKTLRRL
ETILRTCKDSGTLNKRKSFVIQSRPNYNSALVVVLVVIIAILIAYLSGNRP
NT seq
1236 nt
NT seq
+upstream
nt +downstream
nt
atggggagtttaggtgcaatgctgaggaatcctgaggatatttatccattgatgaaactg
aagttagcggcgcgatatgcagagaaacagatccctcctcagccacattgggccttctgt
tacattatgcttcacaaggtttctcgtagtttttctctcgtcattcaacagcttcccgtg
gaacttcgcgatgctgtatgcattttctatttggttcttcgagcgcttgacacagtcgag
gacgataccagtgtagccacggaggtgaaagtacctattttgatgtcattccatcgccat
gtttatgatcgtgaatggcatttttcgtgtggtacgaaggactacaaggttcttatggac
cagttccatcatgtttcgactgcttttctggagctagagaaacattacaaggaggcaatt
gaggacattactatgaggatgggtgcaggaatggcaaagtttatatgcaaggaggtggaa
acaattggtgattatgatgaatattgtcactatgtagctgggctcgtcggattaggctta
tcaaagcttttccgcgcctctgggaaagaagatttggcatcagattctctctccaattcc
atgggtttatttcttcagaaaacaaatatcattagagattatctggaggacataaatgaa
gtacccaagtgtcgcatgttttggcctcgtcagatttggagtaaatacgttgacaagctc
gaggacttgaagtgtgaggaaaactctgtaaaggctgtgcaatgtctgaatgagatggtc
actaatgctttatcacatgtagaagattctttgacttacatgtccacactgcgagatcct
gctatctttcgattctgtgctattccacaggtcatggcaattgggacattggcaaagtgc
tataacaacgttgaagttttcagaggagttgtaaaaatgagacgtggtctcactgctaag
gttattgaccggaccaggaacatggcagatgtatatggtgctttctatgacttctcttgt
attctgaaagccaaggtggagtataaagatccaaatgcagcaaaaactttaagaaggctt
gaaacaatcttgagaacttgcaaagactctggaaccttgaataaaaggaaatctttcgta
atccagagcagacctaattacaattcagctttggttgttgtcctcgttgtcataatagct
atccttattgcatacctatctggaaaccggccttag
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