Nicotiana attenuata (coyote tobacco): 109210259
Help
Entry
109210259 CDS
T05870
Name
(RefSeq) protein TRANSPORT INHIBITOR RESPONSE 1-like
KO
K14485
transport inhibitor response 1
Organism
nau
Nicotiana attenuata (coyote tobacco)
Pathway
nau04075
Plant hormone signal transduction
Brite
KEGG Orthology (KO) [BR:
nau00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
109210259
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
nau04121
]
109210259
Ubiquitin system [BR:
nau04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
109210259
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Transp_inhibit
F-box_5
LRR_4
LRR_At5g56370
F-box-like
LRR_6
LRR_14
F-box
DUF4239
Motif
Other DBs
NCBI-GeneID:
109210259
NCBI-ProteinID:
XP_019229200
UniProt:
A0A314KLV0
LinkDB
All DBs
Position
Unknown
AA seq
592 aa
AA seq
DB search
MASSSFPEEVLKHLFSFLASDKDRNSVSLVCKSWYEIERRCWRKVFIGNCYAVSPEIMIR
RFPTEVRSVKLKGKPHFADFNLVPEGWGAYVQPWIAAMSGTYTKLEEIRLKRMVVSDESL
ELISTSFEHFKVLVLLSCEGFTTDGLAAIAANCRNLRELDLGESEVEDLSSDWLSYFPDS
CTSLVSLNISCLGSEVSFSDLERLVARSPNLRTLRLNHSVPLEKLPNLLLGASRLVEFGT
GAFSSEVQSDIFSNLEEAFSGCKRLKGLSGFWDVVPAYLSAIYPVCSGLTSLNLSYATIQ
NPDLSKLTSQCHNLQRLWVLDYIEDTGLQMLAASCKDLQELRVFPSDPFASEPDVLLTEQ
GLVAVSDGCPKLQSVLYFCRQMTNAALVTIARNRPNMTRFRLCIIEPRTPDYLTLEPLDV
GFGAIVEECKELRRLSLSGLLTDRVFECIGTHAKKLEMLSVAFAGDSDLGLHHVLSGCES
LRKLEIRDCPFGDEALLANAAKLEKMRSLWMSSCSVSFGACKLLGQKLPRLNVEVIDERG
PTDTTRPDSCPVDKLYIYRTVAGPRLDMPDYVWTMNDDAAEEYCVRDIVDMP
NT seq
1779 nt
NT seq
+upstream
nt +downstream
nt
atggcgtcctcatcatttccagaagaagtgttaaagcacctgttctcgtttttagcctcc
gacaaggacaggaacagtgtatccttagtgtgcaaatcatggtacgagattgagaggcgg
tgctggaggaaagtattcataggaaactgttacgccgttagccctgagattatgatcaga
cggttccctactgaagttagatccgtgaagctaaaaggaaagccacattttgcggacttt
aacctagtacctgaaggttggggtgcgtatgtacaaccttggattgctgcaatgtcgggg
acttatactaaacttgaggagattagacttaagcgaatggttgtcagtgatgagtcgttg
gagttgatttctacttcgtttgagcattttaaggtgttggtgttgttgtcttgtgaaggg
tttactactgatggacttgctgctattgccgctaactgcaggaatctgagagaactggac
ttgggagaaagtgaagtggaggacctaagtagcgattggcttagttattttcctgatagc
tgtacttcactggtttcacttaacatttcttgtttgggttctgaggtcagcttctcagat
ctggagcgtctggttgctcgctctcctaatttgaggactcttcggctcaatcattctgtt
ccccttgagaagcttcctaacctacttctcggcgcttcccggttggttgaatttggtaca
ggtgccttctcttctgaggtacagtctgatattttctcaaacctggaagaagctttttca
ggctgcaagagacttaaaggcttgtctggattttgggatgtcgtgccagcttatctttca
gctatatatccagtttgctccggactcacctctttgaatttgagctacgctactattcaa
aaccctgatcttagcaagctcacaagtcagtgtcacaatttgcagcgattgtgggtactt
gactacattgaagatactggtctccagatgcttgccgcttcctgtaaggaccttcaagaa
cttagggtgtttccttctgatccctttgcttcagaaccagatgttttacttacagagcaa
ggccttgtggctgtctcagatggctgtcctaagctccagtcggttttatacttctgccgc
caaatgacaaatgccgctttggttactattgcaagaaaccgtcctaacatgactcgtttc
cgcttgtgtattattgaacctcgaactcccgattacttgactcttgaaccgcttgatgtt
ggttttggggcaattgtggaagaatgcaaagagttgcggcgactttctctttctgggctc
cttactgaccgtgtgttcgagtgcattggaacccatgctaaaaagttagagatgctttcc
gttgcttttgctggggatagtgatctgggcctccaccatgttctatctggttgcgagagc
ctcagaaaactagagatcagagactgcccatttggcgacgaggctcttttggctaatgct
gcaaagctggagaagatgcgttccctttggatgtcttcttgttcagtaagttttggagcc
tgtaagctgctaggtcagaagctgcctaggcttaatgttgaagttatagatgagaggggt
cccacggatactacgcggccagatagctgccctgttgataaactttacatataccgaaca
gtggctggaccaaggcttgacatgcctgattatgtttggacaatgaatgatgatgctgct
gaggagtactgtgttagggatatagtagatatgccctag
DBGET
integrated database retrieval system
